RNA–Protein interactions for RNA: ENST00000506734.5

SMN2-206, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 1,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-206ENST00000506734 CDC37Q16543 378 aaPredicted RBP21.12■□□□□ 0.97
SMN2-206ENST00000506734 QRICH1Q2TAL8 776 aa21.12■□□□□ 0.97
SMN2-206ENST00000506734 SYDE2Q5VT97 1194 aa21.12■□□□□ 0.97
SMN2-206ENST00000506734 ANGEL2Q5VTE6 544 aaKnown RBP21.12■□□□□ 0.97
SMN2-206ENST00000506734 REXO1Q8N1G1 1221 aaKnown RBP21.12■□□□□ 0.97
SMN2-206ENST00000506734 NUP88Q99567 741 aaPredicted RBP21.12■□□□□ 0.97
SMN2-206ENST00000506734 VCPKMTQ9H867 229 aa21.12■□□□□ 0.97
SMN2-206ENST00000506734 RIC8AQ9NPQ8 531 aa21.12■□□□□ 0.97
SMN2-206ENST00000506734 EPS15P42566 896 aa21.11■□□□□ 0.97
SMN2-206ENST00000506734 SYKP43405 635 aa21.11■□□□□ 0.97
SMN2-206ENST00000506734 PTGDRQ13258 359 aa21.11■□□□□ 0.97
SMN2-206ENST00000506734 NONOQ15233 471 aaKnown RBP eCLIP21.11■□□□□ 0.97
SMN2-206ENST00000506734 DCAF15Q66K64 600 aa21.11■□□□□ 0.97
SMN2-206ENST00000506734 ILDR2Q71H61 639 aa21.11■□□□□ 0.97
SMN2-206ENST00000506734 CKAP2LQ8IYA6 745 aa21.11■□□□□ 0.97
SMN2-206ENST00000506734 GLT8D2Q9H1C3 349 aa21.11■□□□□ 0.97
SMN2-206ENST00000506734 TMEM232C9JQI7 657 aa21.1■□□□□ 0.97
SMN2-206ENST00000506734 PLA2G6O60733 806 aa21.1■□□□□ 0.97
SMN2-206ENST00000506734 GRIN1Q05586 938 aa21.1■□□□□ 0.97
SMN2-206ENST00000506734 KIAA1755Q5JYT7 1200 aa21.1■□□□□ 0.97
SMN2-206ENST00000506734 NBPF12Q5TAG4 269 aaPredicted RBP21.1■□□□□ 0.97
SMN2-206ENST00000506734 ARL6IP4Q66PJ3 421 aaKnown RBP21.1■□□□□ 0.97
SMN2-206ENST00000506734 FAM13BQ9NYF5 915 aa21.1■□□□□ 0.97
SMN2-206ENST00000506734 PITPNM2Q9BZ72 1349 aa21.1■□□□□ 0.97
SMN2-206ENST00000506734 HIRAP54198 1017 aaPredicted RBP21.1■□□□□ 0.97
SMN2-206ENST00000506734 TYRO3Q06418 890 aa21.1■□□□□ 0.97
SMN2-206ENST00000506734 ORC2Q13416 577 aaPredicted RBP21.1■□□□□ 0.97
SMN2-206ENST00000506734 INF2Q27J81 1249 aa21.1■□□□□ 0.97
SMN2-206ENST00000506734 C4orf32Q8N8J7 132 aa21.1■□□□□ 0.97
SMN2-206ENST00000506734 ZNF341Q9BYN7 854 aa21.1■□□□□ 0.97
SMN2-206ENST00000506734 GGA3Q9NZ52 723 aa21.1■□□□□ 0.97
SMN2-206ENST00000506734 ZNF112Q9UJU3 913 aa21.1■□□□□ 0.97
SMN2-206ENST00000506734 KCNH3Q9ULD8 1083 aa21.1■□□□□ 0.97
SMN2-206ENST00000506734 MRVI1Q9Y6F6 885 aa21.1■□□□□ 0.97
SMN2-206ENST00000506734 DDNO94850 711 aaPredicted RBP21.09■□□□□ 0.97
SMN2-206ENST00000506734 MCM7P33993 719 aa21.09■□□□□ 0.97
SMN2-206ENST00000506734 CLK2P49760 499 aaKnown RBP21.09■□□□□ 0.97
SMN2-206ENST00000506734 STAT2P52630 851 aa21.09■□□□□ 0.97
SMN2-206ENST00000506734 ELOA2Q8IYF1 753 aaPredicted RBP21.09■□□□□ 0.97
SMN2-206ENST00000506734 SPICE1Q8N0Z3 855 aa21.09■□□□□ 0.97
SMN2-206ENST00000506734 CUL5Q93034 780 aa21.09■□□□□ 0.97
SMN2-206ENST00000506734 PANK2Q9BZ23 570 aa21.09■□□□□ 0.97
SMN2-206ENST00000506734 CSRNP2Q9H175 543 aa21.09■□□□□ 0.97
SMN2-206ENST00000506734 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.09■□□□□ 0.97
SMN2-206ENST00000506734 LAD1O00515 517 aa21.08■□□□□ 0.97
SMN2-206ENST00000506734 MRPL12P52815 198 aaKnown RBP21.08■□□□□ 0.97
SMN2-206ENST00000506734 C9orf131Q5VYM1 1079 aa21.08■□□□□ 0.97
SMN2-206ENST00000506734 SASS6Q6UVJ0 657 aa21.08■□□□□ 0.97
SMN2-206ENST00000506734 SDF4Q9BRK5 362 aa21.08■□□□□ 0.97
SMN2-206ENST00000506734 ADARB2Q9NS39 739 aaKnown RBP21.08■□□□□ 0.97
SMN2-206ENST00000506734 BIN2Q9UBW5 565 aaPredicted RBP21.08■□□□□ 0.97
SMN2-206ENST00000506734 DOCK1Q14185 1865 aa21.08■□□□□ 0.96
SMN2-206ENST00000506734 LMOD1P29536 600 aaPredicted RBP21.07■□□□□ 0.96
SMN2-206ENST00000506734 IKQ13123 557 aaPredicted RBP21.07■□□□□ 0.96
SMN2-206ENST00000506734 FAM83BQ5T0W9 1011 aa21.07■□□□□ 0.96
SMN2-206ENST00000506734 NEK8Q86SG6 692 aa21.07■□□□□ 0.96
SMN2-206ENST00000506734 AMNQ9BXJ7 453 aa21.07■□□□□ 0.96
SMN2-206ENST00000506734 PRR12Q9ULL5 1215 aa21.07■□□□□ 0.96
SMN2-206ENST00000506734 PCDHA1Q9Y5I3 950 aa21.07■□□□□ 0.96
SMN2-206ENST00000506734 UVSSAQ2YD98 709 aa21.06■□□□□ 0.96
SMN2-206ENST00000506734 JAKMIP3Q5VZ66 844 aa21.06■□□□□ 0.96
SMN2-206ENST00000506734 FAM160B2Q86V87 743 aa21.06■□□□□ 0.96
SMN2-206ENST00000506734 FBXO11Q86XK2 927 aa21.06■□□□□ 0.96
SMN2-206ENST00000506734 CHURC1Q8WUH1 139 aa21.06■□□□□ 0.96
SMN2-206ENST00000506734 GLIS2Q9BZE0 524 aaPredicted RBP21.06■□□□□ 0.96
SMN2-206ENST00000506734 KIAA1683Q9H0B3 1180 aa21.06■□□□□ 0.96
SMN2-206ENST00000506734 PSTPIP2Q9H939 334 aa21.06■□□□□ 0.96
SMN2-206ENST00000506734 PRPHP41219 470 aa21.06■□□□□ 0.96
SMN2-206ENST00000506734 TRAF1Q13077 416 aa21.06■□□□□ 0.96
SMN2-206ENST00000506734 SPECC1Q5M775 1068 aa21.06■□□□□ 0.96
SMN2-206ENST00000506734 TEX2Q8IWB9 1127 aa21.06■□□□□ 0.96
SMN2-206ENST00000506734 TBCKQ8TEA7 893 aa21.06■□□□□ 0.96
SMN2-206ENST00000506734 TMEM260Q9NX78 707 aa21.06■□□□□ 0.96
SMN2-206ENST00000506734 FEM1BQ9UK73 627 aa21.06■□□□□ 0.96
SMN2-206ENST00000506734 CAVIN2O95810 425 aa21.05■□□□□ 0.96
SMN2-206ENST00000506734 KRBA2Q6ZNG9 492 aa21.05■□□□□ 0.96
SMN2-206ENST00000506734 SCYL3Q8IZE3 742 aa21.05■□□□□ 0.96
SMN2-206ENST00000506734 RNF214Q8ND24 703 aa21.05■□□□□ 0.96
SMN2-206ENST00000506734 LPAR1Q92633 364 aa21.05■□□□□ 0.96
SMN2-206ENST00000506734 KIAA1468Q9P260 1216 aa21.05■□□□□ 0.96
SMN2-206ENST00000506734 SSC5DA1L4H1 1573 aa21.04■□□□□ 0.96
SMN2-206ENST00000506734 VWA3AA6NCI4 1184 aa21.04■□□□□ 0.96
SMN2-206ENST00000506734 INPP5BP32019 993 aa21.04■□□□□ 0.96
SMN2-206ENST00000506734 LONP1P36776 959 aaKnown RBP21.04■□□□□ 0.96
SMN2-206ENST00000506734 MCTP2Q6DN12 878 aa21.04■□□□□ 0.96
SMN2-206ENST00000506734 CCDC84Q86UT8 332 aaPredicted RBP21.04■□□□□ 0.96
SMN2-206ENST00000506734 FEZ1Q99689 392 aa21.04■□□□□ 0.96
SMN2-206ENST00000506734 RANBP17Q9H2T7 1088 aaKnown RBP21.04■□□□□ 0.96
SMN2-206ENST00000506734 ZC3H4Q9UPT8 1303 aaKnown RBP21.03■□□□□ 0.96
SMN2-206ENST00000506734 ZYXQ15942 572 aaKnown RBP21.03■□□□□ 0.96
SMN2-206ENST00000506734 IL17AQ16552 155 aa21.03■□□□□ 0.96
SMN2-206ENST00000506734 STX1AQ16623 288 aa21.03■□□□□ 0.96
SMN2-206ENST00000506734 UBE2SQ16763 222 aa21.03■□□□□ 0.96
SMN2-206ENST00000506734 LETM2Q2VYF4 491 aa21.03■□□□□ 0.96
SMN2-206ENST00000506734 LONRF3Q496Y0 759 aa21.03■□□□□ 0.96
SMN2-206ENST00000506734 FAM200AQ8TCP9 573 aa21.03■□□□□ 0.96
SMN2-206ENST00000506734 L3MBTL3Q96JM7 780 aaPredicted RBP21.03■□□□□ 0.96
SMN2-206ENST00000506734 WDR18Q9BV38 432 aa21.03■□□□□ 0.96
SMN2-206ENST00000506734 WDR46O15213 610 aaKnown RBP21.02■□□□□ 0.96
SMN2-206ENST00000506734 CCNT1O60563 726 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms