RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 KCNJ6P48051 423 aa7.14□□□□□ -1.27
TRAPPC13-205ENST00000504243 PPP2R2AP63151 447 aa7.14□□□□□ -1.27
TRAPPC13-205ENST00000504243 GAB4Q2WGN9 574 aa7.14□□□□□ -1.27
TRAPPC13-205ENST00000504243 ZNF792Q3KQV3 632 aa7.14□□□□□ -1.27
TRAPPC13-205ENST00000504243 TAF7LQ5H9L4 462 aa7.14□□□□□ -1.27
TRAPPC13-205ENST00000504243 EGFLAMQ63HQ2 1017 aa7.14□□□□□ -1.27
TRAPPC13-205ENST00000504243 ZNF662Q6ZS27 426 aa7.14□□□□□ -1.27
TRAPPC13-205ENST00000504243 CBLL1Q75N03 491 aa7.14□□□□□ -1.27
TRAPPC13-205ENST00000504243 SYTL5Q8TDW5 730 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC13-205ENST00000504243 CARS2Q9HA77 564 aaKnown RBP7.14□□□□□ -1.27
TRAPPC13-205ENST00000504243 TMEM260Q9NX78 707 aa7.14□□□□□ -1.27
TRAPPC13-205ENST00000504243 CGGBP1Q9UFW8 167 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC13-205ENST00000504243 DUSP13Q9UII6 198 aa7.14□□□□□ -1.27
TRAPPC13-205ENST00000504243 MINPP1Q9UNW1 487 aa7.14□□□□□ -1.27
TRAPPC13-205ENST00000504243 SBNO2Q9Y2G9 1366 aa7.14□□□□□ -1.27
TRAPPC13-205ENST00000504243 DIS3Q9Y2L1 958 aaKnown RBP7.14□□□□□ -1.27
TRAPPC13-205ENST00000504243 FHOD1Q9Y613 1164 aa7.14□□□□□ -1.27
TRAPPC13-205ENST00000504243 A0A087WZG4 1122 aa7.13□□□□□ -1.27
TRAPPC13-205ENST00000504243 SSU72P8A0A1W2PR75 194 aa7.13□□□□□ -1.27
TRAPPC13-205ENST00000504243 PRODHO43272 600 aa7.13□□□□□ -1.27
TRAPPC13-205ENST00000504243 SIGLEC6O43699 453 aa7.13□□□□□ -1.27
TRAPPC13-205ENST00000504243 VAMP4O75379 141 aa7.13□□□□□ -1.27
TRAPPC13-205ENST00000504243 ASMTLO95671 621 aa7.13□□□□□ -1.27
TRAPPC13-205ENST00000504243 RNASE1P07998 156 aaKnown RBP7.13□□□□□ -1.27
TRAPPC13-205ENST00000504243 NCLP19338 710 aaKnown RBP7.13□□□□□ -1.27
TRAPPC13-205ENST00000504243 L1CAMP32004 1257 aa7.13□□□□□ -1.27
TRAPPC13-205ENST00000504243 DPY19L1Q2PZI1 675 aa7.13□□□□□ -1.27
TRAPPC13-205ENST00000504243 C16orf86Q6ZW13 317 aa7.13□□□□□ -1.27
TRAPPC13-205ENST00000504243 CREG2Q8IUH2 290 aa7.13□□□□□ -1.27
TRAPPC13-205ENST00000504243 BTN2A2Q8WVV5 523 aa7.13□□□□□ -1.27
TRAPPC13-205ENST00000504243 RCC1LQ96I51 464 aaKnown RBP7.13□□□□□ -1.27
TRAPPC13-205ENST00000504243 MBNL3Q9NUK0 354 aaKnown RBP7.13□□□□□ -1.27
TRAPPC13-205ENST00000504243 PRR13Q9NZ81 148 aa7.13□□□□□ -1.27
TRAPPC13-205ENST00000504243 EMC9Q9Y3B6 208 aa7.13□□□□□ -1.27
TRAPPC13-205ENST00000504243 TBX1O43435 398 aa7.12□□□□□ -1.27
TRAPPC13-205ENST00000504243 ADCY3O60266 1144 aa7.12□□□□□ -1.27
TRAPPC13-205ENST00000504243 ESR1P03372 595 aa7.12□□□□□ -1.27
TRAPPC13-205ENST00000504243 AMPD2Q01433 879 aa7.12□□□□□ -1.27
TRAPPC13-205ENST00000504243 TCEA2Q15560 299 aa7.12□□□□□ -1.27
TRAPPC13-205ENST00000504243 C21orf62-AS1Q17RA5 79 aa7.12□□□□□ -1.27
TRAPPC13-205ENST00000504243 TMEM67Q5HYA8 995 aa7.12□□□□□ -1.27
TRAPPC13-205ENST00000504243 FAM209AQ5JX71 171 aa7.12□□□□□ -1.27
TRAPPC13-205ENST00000504243 YOD1Q5VVQ6 348 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC13-205ENST00000504243 TRIM59Q8IWR1 403 aa7.12□□□□□ -1.27
TRAPPC13-205ENST00000504243 ARHGEF39Q8N4T4 335 aa7.12□□□□□ -1.27
TRAPPC13-205ENST00000504243 DAGLBQ8NCG7 672 aa7.12□□□□□ -1.27
TRAPPC13-205ENST00000504243 SYTL4Q96C24 671 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC13-205ENST00000504243 IER2Q9BTL4 223 aa7.12□□□□□ -1.27
TRAPPC13-205ENST00000504243 RC3H2Q9HBD1 1191 aaKnown RBP7.12□□□□□ -1.27
TRAPPC13-205ENST00000504243 ARHGEF4Q9NR80 690 aa7.12□□□□□ -1.27
TRAPPC13-205ENST00000504243 GPR55Q9Y2T6 319 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC13-205ENST00000504243 TRBV23-1A0A0A0MS06 115 aa7.11□□□□□ -1.27
TRAPPC13-205ENST00000504243 SHISA3A0PJX4 238 aa7.11□□□□□ -1.27
TRAPPC13-205ENST00000504243 H0Y8X5 98 aa7.11□□□□□ -1.27
TRAPPC13-205ENST00000504243 BIN1O00499 593 aa7.11□□□□□ -1.27
TRAPPC13-205ENST00000504243 SNRPB2P08579 225 aaKnown RBP7.11□□□□□ -1.27
TRAPPC13-205ENST00000504243 LTKP29376 864 aa7.11□□□□□ -1.27
TRAPPC13-205ENST00000504243 POU4F1Q01851 419 aa7.11□□□□□ -1.27
TRAPPC13-205ENST00000504243 LONRF2Q1L5Z9 754 aa7.11□□□□□ -1.27
TRAPPC13-205ENST00000504243 ZC3H12BQ5HYM0 836 aaKnown RBP7.11□□□□□ -1.27
TRAPPC13-205ENST00000504243 RNF187Q5TA31 235 aaPredicted RBP7.11□□□□□ -1.27
TRAPPC13-205ENST00000504243 GTF2IRD2BQ6EKJ0 949 aa7.11□□□□□ -1.27
TRAPPC13-205ENST00000504243 NSMFQ6X4W1 530 aa7.11□□□□□ -1.27
TRAPPC13-205ENST00000504243 GTF2IRD2Q86UP8 949 aa7.11□□□□□ -1.27
TRAPPC13-205ENST00000504243 ZNF655Q8N720 491 aaPredicted RBP7.11□□□□□ -1.27
TRAPPC13-205ENST00000504243 ZNF513Q8N8E2 541 aaPredicted RBP7.11□□□□□ -1.27
TRAPPC13-205ENST00000504243 HDAC8Q9BY41 377 aa7.11□□□□□ -1.27
TRAPPC13-205ENST00000504243 WASH4PA8MWX3 477 aa7.1□□□□□ -1.27
TRAPPC13-205ENST00000504243 PPP1R12AO14974 1030 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC13-205ENST00000504243 CD3EP07766 207 aa7.1□□□□□ -1.27
TRAPPC13-205ENST00000504243 PABPC1P11940 636 aaKnown RBP7.1□□□□□ -1.27
TRAPPC13-205ENST00000504243 ECI1P42126 302 aa7.1□□□□□ -1.27
TRAPPC13-205ENST00000504243 GRIA2P42262 883 aa7.1□□□□□ -1.27
TRAPPC13-205ENST00000504243 EGR3Q06889 387 aa7.1□□□□□ -1.27
TRAPPC13-205ENST00000504243 FOXB2Q5VYV0 432 aa7.1□□□□□ -1.27
TRAPPC13-205ENST00000504243 CRTC3Q6UUV7 619 aa7.1□□□□□ -1.27
TRAPPC13-205ENST00000504243 SCUBE1Q8IWY4 988 aa7.1□□□□□ -1.27
TRAPPC13-205ENST00000504243 MRGPRX3Q96LB0 322 aa7.1□□□□□ -1.27
TRAPPC13-205ENST00000504243 ALPK1Q96QP1 1244 aa7.1□□□□□ -1.27
TRAPPC13-205ENST00000504243 DHRS4Q9BTZ2 278 aa7.1□□□□□ -1.27
TRAPPC13-205ENST00000504243 PRDM7Q9NQW5 492 aa7.1□□□□□ -1.27
TRAPPC13-205ENST00000504243 ADAMTS6Q9UKP5 1117 aa7.1□□□□□ -1.27
TRAPPC13-205ENST00000504243 GSNP06396 782 aa7.09□□□□□ -1.27
TRAPPC13-205ENST00000504243 JUNBP17275 347 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC13-205ENST00000504243 TAL1P17542 331 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC13-205ENST00000504243 NOP2P46087 812 aaKnown RBP7.09□□□□□ -1.27
TRAPPC13-205ENST00000504243 PLEKHG4Q58EX7 1191 aa7.09□□□□□ -1.27
TRAPPC13-205ENST00000504243 RNF111Q6ZNA4 994 aa7.09□□□□□ -1.27
TRAPPC13-205ENST00000504243 ATG4DQ86TL0 474 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC13-205ENST00000504243 JMYQ8N9B5 988 aa7.09□□□□□ -1.27
TRAPPC13-205ENST00000504243 TCTN2Q96GX1 697 aa7.09□□□□□ -1.27
TRAPPC13-205ENST00000504243 EXOC2Q96KP1 924 aa7.09□□□□□ -1.27
TRAPPC13-205ENST00000504243 FEZ1Q99689 392 aa7.09□□□□□ -1.27
TRAPPC13-205ENST00000504243 MRPS23Q9Y3D9 190 aaKnown RBP7.09□□□□□ -1.27
TRAPPC13-205ENST00000504243 CCDC163A0A0D9SF12 145 aa7.08□□□□□ -1.28
TRAPPC13-205ENST00000504243 STXBP3O00186 592 aa7.08□□□□□ -1.28
TRAPPC13-205ENST00000504243 GYS2P54840 703 aa7.08□□□□□ -1.28
TRAPPC13-205ENST00000504243 PCBP3P57721 371 aaKnown RBP7.08□□□□□ -1.28
TRAPPC13-205ENST00000504243 GRB10Q13322 594 aa7.08□□□□□ -1.28
TRAPPC13-205ENST00000504243 SF1Q15637 639 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms