RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 PLS1Q14651 629 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 C21orf62-AS1Q17RA5 79 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 GEN1Q17RS7 908 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 IQCEQ6IPM2 695 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 PRPF40BQ6NWY9 871 aaKnown RBP6.85□□□□□ -1.31
CLCN3-204ENST00000504131 ENAHQ8N8S7 591 aaPredicted RBP6.85□□□□□ -1.31
CLCN3-204ENST00000504131 LMBR1Q8WVP7 490 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 STMN2Q93045 179 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 RILPL2Q969X0 211 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 BEGAINQ9BUH8 593 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 PLEKHA4Q9H4M7 779 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 ANO2Q9NQ90 1003 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 C2CD2Q9Y426 696 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 MRPL42Q9Y6G3 142 aaKnown RBP6.85□□□□□ -1.31
CLCN3-204ENST00000504131 ATAD2Q6PL18 1390 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 CAPN9O14815 690 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 INMTO95050 263 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 BPNT1O95861 308 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 SMTNP53814 917 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 CORO7P57737 925 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 FCHSD1Q86WN1 690 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 SELENOOQ9BVL4 669 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 SH3BGRL2Q9UJC5 107 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 STRIP2Q9ULQ0 834 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 PCDHGA4Q9Y5G9 962 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 LRRIQ1Q96JM4 1722 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 BOLA2-SMG1P6H3BVE0 249 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 C6orf222P0C671 652 aaPredicted RBP6.85□□□□□ -1.31
CLCN3-204ENST00000504131 NFX1Q12986 1120 aaKnown RBP6.85□□□□□ -1.31
CLCN3-204ENST00000504131 SNW1Q13573 536 aaKnown RBP6.85□□□□□ -1.31
CLCN3-204ENST00000504131 CORO6Q6QEF8 472 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 CATSPER4Q7RTX7 472 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 DGLUCYQ7Z3D6 616 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 TTC39CQ8N584 583 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 ANKS4BQ8N8V4 417 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 CNKSR1Q969H4 720 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 SEC62Q99442 399 aaKnown RBP6.85□□□□□ -1.31
CLCN3-204ENST00000504131 BARX2Q9UMQ3 279 aaPredicted RBP6.85□□□□□ -1.31
CLCN3-204ENST00000504131 ADAMTS12P58397 1594 aa6.85□□□□□ -1.31
CLCN3-204ENST00000504131 ACAP1Q15027 740 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 CWF19L2Q2TBE0 894 aaKnown RBP6.84□□□□□ -1.31
CLCN3-204ENST00000504131 CENPKQ9BS16 269 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 ZNF624Q9P2J8 865 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-204ENST00000504131 TEKT2Q9UIF3 430 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 CNTLNQ9NXG0 1405 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 EVC2Q86UK5 1308 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 MCF2LO15068 1137 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 TBC1D12O60347 775 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 RAB27AP51159 221 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 CSNK2BP67870 215 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 ZSCAN23Q3MJ62 389 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 NCAPH2Q6IBW4 605 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 RASGRP2Q7LDG7 609 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 PCGF5Q86SE9 256 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 GPIHBP1Q8IV16 184 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 KIRREL3Q8IZU9 778 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 SLC7A5P1Q8MH63 180 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 FAM133AQ8N9E0 248 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 PPHLN1Q8NEY8 458 aaKnown RBP6.84□□□□□ -1.31
CLCN3-204ENST00000504131 RAB3IL1Q8TBN0 382 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 CALML6Q8TD86 181 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 MAIP1Q8WWC4 291 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 IER2Q9BTL4 223 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 CARD9Q9H257 536 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 DBNDD1Q9H9R9 158 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 CYTH4Q9UIA0 394 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 TTLL3Q9Y4R7 772 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 MBD4O95243 580 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 AP1B1Q10567 949 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 LVRNQ6Q4G3 990 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 FERD3LQ96RJ6 166 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 TRIM8Q9BZR9 551 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 ABCG4Q9H172 646 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 TEX14Q8IWB6 1497 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 IGF1RP08069 1367 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 FAM200AQ8TCP9 573 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 NLRP7Q8WX94 980 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 FAM167BQ9BTA0 163 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 MIS12Q9H081 205 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 TRPC6Q9Y210 931 aa6.84□□□□□ -1.31
CLCN3-204ENST00000504131 hCG_1642624A0A1W2PR95 340 aa6.84□□□□□ -1.32
CLCN3-204ENST00000504131 SGK1O00141 431 aa6.84□□□□□ -1.32
CLCN3-204ENST00000504131 NVLO15381 856 aaKnown RBP6.84□□□□□ -1.32
CLCN3-204ENST00000504131 NBNO60934 754 aa6.84□□□□□ -1.32
CLCN3-204ENST00000504131 PRKACBP22694 351 aa6.84□□□□□ -1.32
CLCN3-204ENST00000504131 CLK1P49759 484 aaKnown RBP6.84□□□□□ -1.32
CLCN3-204ENST00000504131 CWF19L1Q69YN2 538 aaKnown RBP6.84□□□□□ -1.32
CLCN3-204ENST00000504131 TWF2Q6IBS0 349 aaKnown RBP6.84□□□□□ -1.32
CLCN3-204ENST00000504131 APLFQ8IW19 511 aaPredicted RBP6.84□□□□□ -1.32
CLCN3-204ENST00000504131 FNBP1Q96RU3 617 aa6.84□□□□□ -1.32
CLCN3-204ENST00000504131 NOP53Q9NZM5 478 aaKnown RBP6.84□□□□□ -1.32
CLCN3-204ENST00000504131 RRP7AQ9Y3A4 280 aaKnown RBP6.84□□□□□ -1.32
CLCN3-204ENST00000504131 TBKBP1A7MCY6 615 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 GALNT17Q6IS24 598 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 NUDCD3Q8IVD9 361 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 C17orf53Q8N3J3 647 aaPredicted RBP6.83□□□□□ -1.32
CLCN3-204ENST00000504131 PDZD8Q8NEN9 1154 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 CFAP61Q8NHU2 1237 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 CARD11Q9BXL7 1154 aa6.83□□□□□ -1.32
CLCN3-204ENST00000504131 CLSTN2Q9H4D0 955 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms