RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 APEX2Q9UBZ4 518 aa7.7□□□□□ -1.18
SNX13-211ENST00000496855 NOTOA8MTQ0 251 aa7.69□□□□□ -1.18
SNX13-211ENST00000496855 CD3EP07766 207 aa7.69□□□□□ -1.18
SNX13-211ENST00000496855 CEP128Q6ZU80 1094 aa7.69□□□□□ -1.18
SNX13-211ENST00000496855 LIN37Q96GY3 246 aaPredicted RBP7.69□□□□□ -1.18
SNX13-211ENST00000496855 RNF32Q9H0A6 362 aa7.69□□□□□ -1.18
SNX13-211ENST00000496855 FADS2P1A8MWK0 482 aa7.68□□□□□ -1.18
SNX13-211ENST00000496855 KLF4O43474 513 aa7.68□□□□□ -1.18
SNX13-211ENST00000496855 SNX17Q15036 470 aa7.68□□□□□ -1.18
SNX13-211ENST00000496855 SLC14A2Q15849 920 aa7.68□□□□□ -1.18
SNX13-211ENST00000496855 FAM53CQ9NYF3 392 aa7.68□□□□□ -1.18
SNX13-211ENST00000496855 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.68□□□□□ -1.18
SNX13-211ENST00000496855 GPR160Q9UJ42 338 aa7.68□□□□□ -1.18
SNX13-211ENST00000496855 NRDCO43847 1150 aa7.68□□□□□ -1.18
SNX13-211ENST00000496855 PSPNO60542 156 aa7.68□□□□□ -1.18
SNX13-211ENST00000496855 VAMP4O75379 141 aa7.68□□□□□ -1.18
SNX13-211ENST00000496855 STK10O94804 968 aaKnown RBP7.68□□□□□ -1.18
SNX13-211ENST00000496855 IFNGR1P15260 489 aa7.68□□□□□ -1.18
SNX13-211ENST00000496855 ATP2B1P20020 1258 aa7.68□□□□□ -1.18
SNX13-211ENST00000496855 CEBPAP49715 358 aaPredicted RBP7.68□□□□□ -1.18
SNX13-211ENST00000496855 GRB10Q13322 594 aa7.68□□□□□ -1.18
SNX13-211ENST00000496855 MRM1Q6IN84 353 aaKnown RBP7.68□□□□□ -1.18
SNX13-211ENST00000496855 CELF2-AS1Q8N7Q2 184 aa7.68□□□□□ -1.18
SNX13-211ENST00000496855 NAT16Q8N8M0 369 aa7.68□□□□□ -1.18
SNX13-211ENST00000496855 TMEM52Q8NDY8 209 aa7.68□□□□□ -1.18
SNX13-211ENST00000496855 BVESQ8NE79 360 aa7.68□□□□□ -1.18
SNX13-211ENST00000496855 CWC22Q9HCG8 908 aaKnown RBP7.68□□□□□ -1.18
SNX13-211ENST00000496855 AKT3Q9Y243 479 aa7.68□□□□□ -1.18
SNX13-211ENST00000496855 GPR55Q9Y2T6 319 aaPredicted RBP7.68□□□□□ -1.18
SNX13-211ENST00000496855 FGF10O15520 208 aaPredicted RBP7.67□□□□□ -1.18
SNX13-211ENST00000496855 GJB6O95452 261 aa7.67□□□□□ -1.18
SNX13-211ENST00000496855 RTP1P59025 263 aa7.67□□□□□ -1.18
SNX13-211ENST00000496855 AMPD2Q01433 879 aa7.67□□□□□ -1.18
SNX13-211ENST00000496855 MPZL3Q6UWV2 235 aa7.67□□□□□ -1.18
SNX13-211ENST00000496855 SHISA4Q96DD7 197 aa7.67□□□□□ -1.18
SNX13-211ENST00000496855 MCMBPQ9BTE3 642 aa7.67□□□□□ -1.18
SNX13-211ENST00000496855 ST7Q9NRC1 585 aa7.67□□□□□ -1.18
SNX13-211ENST00000496855 EMC9Q9Y3B6 208 aa7.67□□□□□ -1.18
SNX13-211ENST00000496855 LRRC10BA6NIK2 292 aa7.66□□□□□ -1.18
SNX13-211ENST00000496855 AURKAO14965 403 aa7.66□□□□□ -1.18
SNX13-211ENST00000496855 SUSD5O60279 629 aa7.66□□□□□ -1.18
SNX13-211ENST00000496855 EFEMP2O95967 443 aa7.66□□□□□ -1.18
SNX13-211ENST00000496855 DDR2Q16832 855 aa7.66□□□□□ -1.18
SNX13-211ENST00000496855 DPY19L1Q2PZI1 675 aa7.66□□□□□ -1.18
SNX13-211ENST00000496855 OGFOD2Q6N063 350 aa7.66□□□□□ -1.18
SNX13-211ENST00000496855 POMZP3Q6PJE2 187 aa7.66□□□□□ -1.18
SNX13-211ENST00000496855 CYP2R1Q6VVX0 501 aa7.66□□□□□ -1.18
SNX13-211ENST00000496855 SLCO6A1Q86UG4 719 aa7.66□□□□□ -1.18
SNX13-211ENST00000496855 NLRX1Q86UT6 975 aa7.66□□□□□ -1.18
SNX13-211ENST00000496855 CRACR2BQ8N4Y2 399 aaPredicted RBP7.66□□□□□ -1.18
SNX13-211ENST00000496855 KRTAP4-8Q9BYQ9 185 aa7.66□□□□□ -1.18
SNX13-211ENST00000496855 YBX2Q9Y2T7 364 aaKnown RBP7.66□□□□□ -1.18
SNX13-211ENST00000496855 A0A1W2PQ45 241 aaPredicted RBP7.65□□□□□ -1.18
SNX13-211ENST00000496855 A0A1W2PQY0 241 aa7.65□□□□□ -1.18
SNX13-211ENST00000496855 STXBP3O00186 592 aa7.65□□□□□ -1.18
SNX13-211ENST00000496855 NOP56O00567 594 aaKnown RBP7.65□□□□□ -1.18
SNX13-211ENST00000496855 TXKP42681 527 aa7.65□□□□□ -1.18
SNX13-211ENST00000496855 RAB33AQ14088 237 aa7.65□□□□□ -1.18
SNX13-211ENST00000496855 MLANAQ16655 118 aa7.65□□□□□ -1.18
SNX13-211ENST00000496855 HSF5Q4G112 596 aaPredicted RBP7.65□□□□□ -1.18
SNX13-211ENST00000496855 RCSD1Q6JBY9 416 aa7.65□□□□□ -1.18
SNX13-211ENST00000496855 PPP1R14AQ96A00 147 aa7.65□□□□□ -1.18
SNX13-211ENST00000496855 WTIPA6NIX2 430 aaPredicted RBP7.64□□□□□ -1.19
SNX13-211ENST00000496855 KCNH1O95259 989 aa7.64□□□□□ -1.19
SNX13-211ENST00000496855 GALK1P51570 392 aa7.64□□□□□ -1.19
SNX13-211ENST00000496855 SV2CQ496J9 727 aa7.64□□□□□ -1.19
SNX13-211ENST00000496855 HLA-DQA1Q5Y7H0 255 aa7.64□□□□□ -1.19
SNX13-211ENST00000496855 EEF1DP3Q658K8 133 aa7.64□□□□□ -1.19
SNX13-211ENST00000496855 GALNT18Q6P9A2 607 aa7.64□□□□□ -1.19
SNX13-211ENST00000496855 PRR23BQ6ZRT6 265 aa7.64□□□□□ -1.19
SNX13-211ENST00000496855 EEPD1Q7L9B9 569 aa7.64□□□□□ -1.19
SNX13-211ENST00000496855 CKAP2LQ8IYA6 745 aa7.64□□□□□ -1.19
SNX13-211ENST00000496855 PTCHD1Q96NR3 888 aa7.64□□□□□ -1.19
SNX13-211ENST00000496855 PLCD4Q9BRC7 762 aa7.64□□□□□ -1.19
SNX13-211ENST00000496855 SLC6A17Q9H1V8 727 aa7.64□□□□□ -1.19
SNX13-211ENST00000496855 BACE2Q9Y5Z0 518 aa7.64□□□□□ -1.19
SNX13-211ENST00000496855 TAF6LQ9Y6J9 622 aa7.64□□□□□ -1.19
SNX13-211ENST00000496855 C2orf71A6NGG8 1288 aa7.63□□□□□ -1.19
SNX13-211ENST00000496855 TRIM59Q8IWR1 403 aa7.63□□□□□ -1.19
SNX13-211ENST00000496855 INTS4Q96HW7 963 aaKnown RBP7.63□□□□□ -1.19
SNX13-211ENST00000496855 MRGPRX3Q96LB0 322 aa7.63□□□□□ -1.19
SNX13-211ENST00000496855 JMJD8Q96S16 334 aa7.63□□□□□ -1.19
SNX13-211ENST00000496855 LGR4Q9BXB1 951 aa7.63□□□□□ -1.19
SNX13-211ENST00000496855 TRIM55Q9BYV6 548 aa7.63□□□□□ -1.19
SNX13-211ENST00000496855 CRTAC1Q9NQ79 661 aa7.63□□□□□ -1.19
SNX13-211ENST00000496855 TBC1D8O95759 1140 aa7.62□□□□□ -1.19
SNX13-211ENST00000496855 GTF2F1P35269 517 aaKnown RBP eCLIP7.62□□□□□ -1.19
SNX13-211ENST00000496855 SEPHS1P49903 392 aa7.62□□□□□ -1.19
SNX13-211ENST00000496855 SIRT2Q8IXJ6 389 aa7.62□□□□□ -1.19
SNX13-211ENST00000496855 POU5F2Q8N7G0 328 aa7.62□□□□□ -1.19
SNX13-211ENST00000496855 ARMC5Q96C12 935 aa7.62□□□□□ -1.19
SNX13-211ENST00000496855 EPN3Q9H201 632 aa7.62□□□□□ -1.19
SNX13-211ENST00000496855 LRP2BPQ9P2M1 347 aa7.62□□□□□ -1.19
SNX13-211ENST00000496855 PPP1R1BQ9UD71 204 aaPredicted RBP7.62□□□□□ -1.19
SNX13-211ENST00000496855 ITGAVP06756 1048 aa7.62□□□□□ -1.19
SNX13-211ENST00000496855 KIR3DS1Q14943 382 aa7.62□□□□□ -1.19
SNX13-211ENST00000496855 SLC10A6Q3KNW5 377 aa7.62□□□□□ -1.19
SNX13-211ENST00000496855 GTF2IRD2BQ6EKJ0 949 aa7.62□□□□□ -1.19
SNX13-211ENST00000496855 GTF2IRD2Q86UP8 949 aa7.62□□□□□ -1.19
SNX13-211ENST00000496855 ZNF227Q86WZ6 799 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms