RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 ATAD5Q96QE3 1844 aa18.71■□□□□ 0.59
HLA-A-208ENST00000496081 TMEM232C9JQI7 657 aa18.7■□□□□ 0.58
HLA-A-208ENST00000496081 DDNO94850 711 aaPredicted RBP18.7■□□□□ 0.58
HLA-A-208ENST00000496081 CCDC192P0DO97 292 aa18.7■□□□□ 0.58
HLA-A-208ENST00000496081 ATP2C1P98194 919 aaPredicted RBP18.7■□□□□ 0.58
HLA-A-208ENST00000496081 PTGDRQ13258 359 aa18.7■□□□□ 0.58
HLA-A-208ENST00000496081 INF2Q27J81 1249 aa18.7■□□□□ 0.58
HLA-A-208ENST00000496081 QRICH1Q2TAL8 776 aa18.7■□□□□ 0.58
HLA-A-208ENST00000496081 NBPF12Q5TAG4 269 aaPredicted RBP18.7■□□□□ 0.58
HLA-A-208ENST00000496081 RNF214Q8ND24 703 aa18.7■□□□□ 0.58
HLA-A-208ENST00000496081 GOPCQ9HD26 462 aa18.7■□□□□ 0.58
HLA-A-208ENST00000496081 MCM7P33993 719 aa18.7■□□□□ 0.58
HLA-A-208ENST00000496081 SYKP43405 635 aa18.7■□□□□ 0.58
HLA-A-208ENST00000496081 ADCY7P51828 1080 aa18.7■□□□□ 0.58
HLA-A-208ENST00000496081 HIRAP54198 1017 aaPredicted RBP18.7■□□□□ 0.58
HLA-A-208ENST00000496081 SPECC1Q5M775 1068 aa18.7■□□□□ 0.58
HLA-A-208ENST00000496081 BTNL9Q6UXG8 535 aa18.7■□□□□ 0.58
HLA-A-208ENST00000496081 KRT25Q7Z3Z0 450 aa18.7■□□□□ 0.58
HLA-A-208ENST00000496081 TYRO3Q06418 890 aa18.69■□□□□ 0.58
HLA-A-208ENST00000496081 CDC37Q16543 378 aaPredicted RBP18.69■□□□□ 0.58
HLA-A-208ENST00000496081 CCDC84Q86UT8 332 aaPredicted RBP18.69■□□□□ 0.58
HLA-A-208ENST00000496081 APOBEC3FQ8IUX4 373 aaKnown RBP18.69■□□□□ 0.58
HLA-A-208ENST00000496081 REXO1Q8N1G1 1221 aaKnown RBP18.69■□□□□ 0.58
HLA-A-208ENST00000496081 SDF4Q9BRK5 362 aa18.69■□□□□ 0.58
HLA-A-208ENST00000496081 GLIS2Q9BZE0 524 aaPredicted RBP18.69■□□□□ 0.58
HLA-A-208ENST00000496081 CSRNP2Q9H175 543 aa18.69■□□□□ 0.58
HLA-A-208ENST00000496081 BIN2Q9UBW5 565 aaPredicted RBP18.69■□□□□ 0.58
HLA-A-208ENST00000496081 NONOQ15233 471 aaKnown RBP eCLIP18.68■□□□□ 0.58
HLA-A-208ENST00000496081 SYDE2Q5VT97 1194 aa18.68■□□□□ 0.58
HLA-A-208ENST00000496081 FERMT2Q96AC1 680 aa18.68■□□□□ 0.58
HLA-A-208ENST00000496081 TIGD1Q96MW7 591 aa18.68■□□□□ 0.58
HLA-A-208ENST00000496081 SH2D4AQ9H788 454 aa18.68■□□□□ 0.58
HLA-A-208ENST00000496081 VCPKMTQ9H867 229 aa18.68■□□□□ 0.58
HLA-A-208ENST00000496081 RIC8AQ9NPQ8 531 aa18.68■□□□□ 0.58
HLA-A-208ENST00000496081 TMEM260Q9NX78 707 aa18.68■□□□□ 0.58
HLA-A-208ENST00000496081 GGA3Q9NZ52 723 aa18.68■□□□□ 0.58
HLA-A-208ENST00000496081 KCNH3Q9ULD8 1083 aa18.68■□□□□ 0.58
HLA-A-208ENST00000496081 CTNND1O60716 968 aaKnown RBP18.68■□□□□ 0.58
HLA-A-208ENST00000496081 IKQ13123 557 aaPredicted RBP18.68■□□□□ 0.58
HLA-A-208ENST00000496081 JAKMIP3Q5VZ66 844 aa18.68■□□□□ 0.58
HLA-A-208ENST00000496081 C4orf32Q8N8J7 132 aa18.68■□□□□ 0.58
HLA-A-208ENST00000496081 FAM13BQ9NYF5 915 aa18.68■□□□□ 0.58
HLA-A-208ENST00000496081 ZYXQ15942 572 aaKnown RBP18.67■□□□□ 0.58
HLA-A-208ENST00000496081 FAM83BQ5T0W9 1011 aa18.67■□□□□ 0.58
HLA-A-208ENST00000496081 PRAMEF18Q5VWM3 479 aa18.67■□□□□ 0.58
HLA-A-208ENST00000496081 C9orf131Q5VYM1 1079 aa18.67■□□□□ 0.58
HLA-A-208ENST00000496081 SASS6Q6UVJ0 657 aa18.67■□□□□ 0.58
HLA-A-208ENST00000496081 STAT2P52630 851 aa18.66■□□□□ 0.58
HLA-A-208ENST00000496081 SNAP25P60880 206 aa18.66■□□□□ 0.58
HLA-A-208ENST00000496081 DCAF15Q66K64 600 aa18.66■□□□□ 0.58
HLA-A-208ENST00000496081 USP49Q70CQ1 688 aa18.66■□□□□ 0.58
HLA-A-208ENST00000496081 GINM1Q9NU53 330 aa18.66■□□□□ 0.58
HLA-A-208ENST00000496081 PRR12Q9ULL5 1215 aa18.66■□□□□ 0.58
HLA-A-208ENST00000496081 PCDHA1Q9Y5I3 950 aa18.66■□□□□ 0.58
HLA-A-208ENST00000496081 CLK2P49760 499 aaKnown RBP18.65■□□□□ 0.58
HLA-A-208ENST00000496081 NEK8Q86SG6 692 aa18.65■□□□□ 0.58
HLA-A-208ENST00000496081 TBCKQ8TEA7 893 aa18.65■□□□□ 0.58
HLA-A-208ENST00000496081 CUL5Q93034 780 aa18.65■□□□□ 0.58
HLA-A-208ENST00000496081 PSTPIP2Q9H939 334 aa18.65■□□□□ 0.58
HLA-A-208ENST00000496081 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.65■□□□□ 0.58
HLA-A-208ENST00000496081 VWA3AA6NCI4 1184 aa18.65■□□□□ 0.58
HLA-A-208ENST00000496081 INPP5BP32019 993 aa18.65■□□□□ 0.58
HLA-A-208ENST00000496081 MRPL12P52815 198 aaKnown RBP18.65■□□□□ 0.58
HLA-A-208ENST00000496081 IL17AQ16552 155 aa18.65■□□□□ 0.58
HLA-A-208ENST00000496081 UBE2SQ16763 222 aa18.65■□□□□ 0.58
HLA-A-208ENST00000496081 LONRF3Q496Y0 759 aa18.65■□□□□ 0.58
HLA-A-208ENST00000496081 ARL6IP4Q66PJ3 421 aaKnown RBP18.65■□□□□ 0.58
HLA-A-208ENST00000496081 ERCC4Q92889 916 aaPredicted RBP18.65■□□□□ 0.58
HLA-A-208ENST00000496081 AMNQ9BXJ7 453 aa18.65■□□□□ 0.58
HLA-A-208ENST00000496081 ZNF341Q9BYN7 854 aa18.65■□□□□ 0.58
HLA-A-208ENST00000496081 ZNF112Q9UJU3 913 aa18.65■□□□□ 0.58
HLA-A-208ENST00000496081 POLR2AP24928 1970 aaKnown RBP18.64■□□□□ 0.57
HLA-A-208ENST00000496081 LMOD1P29536 600 aaPredicted RBP18.64■□□□□ 0.57
HLA-A-208ENST00000496081 LETM2Q2VYF4 491 aa18.64■□□□□ 0.57
HLA-A-208ENST00000496081 KRBA2Q6ZNG9 492 aa18.64■□□□□ 0.57
HLA-A-208ENST00000496081 FBXO11Q86XK2 927 aa18.64■□□□□ 0.57
HLA-A-208ENST00000496081 HOOK2Q96ED9 719 aa18.64■□□□□ 0.57
HLA-A-208ENST00000496081 EPSTI1Q96J88 318 aa18.64■□□□□ 0.57
HLA-A-208ENST00000496081 ADARB2Q9NS39 739 aaKnown RBP18.64■□□□□ 0.57
HLA-A-208ENST00000496081 KIAA1468Q9P260 1216 aa18.64■□□□□ 0.57
HLA-A-208ENST00000496081 PPP2R3BQ9Y5P8 575 aa18.64■□□□□ 0.57
HLA-A-208ENST00000496081 ANO6Q4KMQ2 910 aa18.63■□□□□ 0.57
HLA-A-208ENST00000496081 FEZ1Q99689 392 aa18.63■□□□□ 0.57
HLA-A-208ENST00000496081 TMEM60Q9H2L4 133 aa18.63■□□□□ 0.57
HLA-A-208ENST00000496081 DOCK1Q14185 1865 aa18.63■□□□□ 0.57
HLA-A-208ENST00000496081 POLR2DO15514 142 aaKnown RBP18.63■□□□□ 0.57
HLA-A-208ENST00000496081 CCNT1O60563 726 aaKnown RBP18.63■□□□□ 0.57
HLA-A-208ENST00000496081 PLA2G6O60733 806 aa18.63■□□□□ 0.57
HLA-A-208ENST00000496081 CHURC1Q8WUH1 139 aa18.63■□□□□ 0.57
HLA-A-208ENST00000496081 SYMPKQ92797 1274 aaKnown RBP18.63■□□□□ 0.57
HLA-A-208ENST00000496081 KIAA1683Q9H0B3 1180 aa18.63■□□□□ 0.57
HLA-A-208ENST00000496081 GLT8D2Q9H1C3 349 aa18.63■□□□□ 0.57
HLA-A-208ENST00000496081 PITPNM2Q9BZ72 1349 aa18.62■□□□□ 0.57
HLA-A-208ENST00000496081 LAD1O00515 517 aa18.62■□□□□ 0.57
HLA-A-208ENST00000496081 EDIL3O43854 480 aa18.62■□□□□ 0.57
HLA-A-208ENST00000496081 CNNM3Q8NE01 707 aa18.62■□□□□ 0.57
HLA-A-208ENST00000496081 FZD1Q9UP38 647 aa18.62■□□□□ 0.57
HLA-A-208ENST00000496081 USP17L15C9J2P7 530 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 USP17L13C9JLJ4 530 aa18.61■□□□□ 0.57
HLA-A-208ENST00000496081 USP17L11C9JVI0 530 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms