RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 KIR2DL1P43626 348 aaPredicted RBP8.61□□□□□ -1.03
CCDC39-207ENST00000495817 KIR2DL2P43627 348 aaPredicted RBP8.61□□□□□ -1.03
CCDC39-207ENST00000495817 CRTC3Q6UUV7 619 aa8.61□□□□□ -1.03
CCDC39-207ENST00000495817 FAM178BQ8IXR5 827 aa8.61□□□□□ -1.03
CCDC39-207ENST00000495817 FIBCD1Q8N539 461 aa8.61□□□□□ -1.03
CCDC39-207ENST00000495817 MYLIPQ8WY64 445 aa8.61□□□□□ -1.03
CCDC39-207ENST00000495817 MAP6Q96JE9 813 aa8.61□□□□□ -1.03
CCDC39-207ENST00000495817 G6PC3Q9BUM1 346 aa8.61□□□□□ -1.03
CCDC39-207ENST00000495817 CARMIL2Q6F5E8 1435 aa8.61□□□□□ -1.03
CCDC39-207ENST00000495817 CCDC85CA6NKD9 419 aa8.6□□□□□ -1.03
CCDC39-207ENST00000495817 MEIS1O00470 390 aa8.6□□□□□ -1.03
CCDC39-207ENST00000495817 PPM1BO75688 479 aa8.6□□□□□ -1.03
CCDC39-207ENST00000495817 DDAH1O94760 285 aa8.6□□□□□ -1.03
CCDC39-207ENST00000495817 IFRD2Q12894 506 aaPredicted RBP8.6□□□□□ -1.03
CCDC39-207ENST00000495817 ABHD4Q8TB40 342 aa8.6□□□□□ -1.03
CCDC39-207ENST00000495817 ZNF669Q96BR6 464 aaPredicted RBP8.6□□□□□ -1.03
CCDC39-207ENST00000495817 FAM53CQ9NYF3 392 aa8.6□□□□□ -1.03
CCDC39-207ENST00000495817 PCDHB10Q9UN67 800 aa8.6□□□□□ -1.03
CCDC39-207ENST00000495817 MINPP1Q9UNW1 487 aa8.6□□□□□ -1.03
CCDC39-207ENST00000495817 DIS3Q9Y2L1 958 aaKnown RBP8.6□□□□□ -1.03
CCDC39-207ENST00000495817 MRPL42Q9Y6G3 142 aaKnown RBP8.6□□□□□ -1.03
CCDC39-207ENST00000495817 ANKRD34BA5PLL1 514 aa8.59□□□□□ -1.03
CCDC39-207ENST00000495817 EPHX1P07099 455 aa8.59□□□□□ -1.03
CCDC39-207ENST00000495817 VAV1P15498 845 aa8.59□□□□□ -1.03
CCDC39-207ENST00000495817 SNX17Q15036 470 aa8.59□□□□□ -1.03
CCDC39-207ENST00000495817 TMEM67Q5HYA8 995 aa8.59□□□□□ -1.03
CCDC39-207ENST00000495817 KIAA1211LQ6NV74 962 aa8.59□□□□□ -1.03
CCDC39-207ENST00000495817 C6orf15Q6UXA7 325 aaPredicted RBP8.59□□□□□ -1.03
CCDC39-207ENST00000495817 ZMYM5Q9UJ78 669 aa8.59□□□□□ -1.03
CCDC39-207ENST00000495817 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.59□□□□□ -1.03
CCDC39-207ENST00000495817 H0Y8X5 98 aa8.58□□□□□ -1.04
CCDC39-207ENST00000495817 ENPP3O14638 875 aa8.58□□□□□ -1.04
CCDC39-207ENST00000495817 FKTNO75072 461 aa8.58□□□□□ -1.04
CCDC39-207ENST00000495817 HSD3B2P26439 372 aa8.58□□□□□ -1.04
CCDC39-207ENST00000495817 TXKP42681 527 aa8.58□□□□□ -1.04
CCDC39-207ENST00000495817 FYB2Q5VWT5 728 aa8.58□□□□□ -1.04
CCDC39-207ENST00000495817 EGFLAMQ63HQ2 1017 aa8.58□□□□□ -1.04
CCDC39-207ENST00000495817 ST13P5Q8NFI4 369 aaPredicted RBP8.58□□□□□ -1.04
CCDC39-207ENST00000495817 BRF1Q92994 677 aa8.58□□□□□ -1.04
CCDC39-207ENST00000495817 RCC1LQ96I51 464 aaKnown RBP8.58□□□□□ -1.04
CCDC39-207ENST00000495817 RNPC3Q96LT9 517 aaKnown RBP8.58□□□□□ -1.04
CCDC39-207ENST00000495817 PUS7Q96PZ0 661 aaKnown RBP8.58□□□□□ -1.04
CCDC39-207ENST00000495817 NOL6Q9H6R4 1146 aaKnown RBP8.58□□□□□ -1.04
CCDC39-207ENST00000495817 SP110Q9HB58 689 aa8.58□□□□□ -1.04
CCDC39-207ENST00000495817 TNFRSF10DQ9UBN6 386 aa8.58□□□□□ -1.04
CCDC39-207ENST00000495817 NOP2P46087 812 aaKnown RBP8.57□□□□□ -1.04
CCDC39-207ENST00000495817 POU4F1Q01851 419 aa8.57□□□□□ -1.04
CCDC39-207ENST00000495817 CRACR2BQ8N4Y2 399 aaPredicted RBP8.57□□□□□ -1.04
CCDC39-207ENST00000495817 DNAJC7Q99615 494 aa8.57□□□□□ -1.04
CCDC39-207ENST00000495817 CDADC1Q9BWV3 514 aa8.57□□□□□ -1.04
CCDC39-207ENST00000495817 SLC12A9Q9BXP2 914 aa8.57□□□□□ -1.04
CCDC39-207ENST00000495817 CWC22Q9HCG8 908 aaKnown RBP8.57□□□□□ -1.04
CCDC39-207ENST00000495817 GRB10Q13322 594 aa8.56□□□□□ -1.04
CCDC39-207ENST00000495817 MTERF2Q49AM1 385 aa8.56□□□□□ -1.04
CCDC39-207ENST00000495817 CYP2R1Q6VVX0 501 aa8.56□□□□□ -1.04
CCDC39-207ENST00000495817 EEPD1Q7L9B9 569 aa8.56□□□□□ -1.04
CCDC39-207ENST00000495817 ADAT2Q7Z6V5 191 aaKnown RBP8.56□□□□□ -1.04
CCDC39-207ENST00000495817 ERVK13-1Q9NX77 482 aa8.56□□□□□ -1.04
CCDC39-207ENST00000495817 SUSD2Q9UGT4 822 aa8.56□□□□□ -1.04
CCDC39-207ENST00000495817 ZNF503-AS2A6NEH8 195 aa8.55□□□□□ -1.04
CCDC39-207ENST00000495817 B2RBV5 119 aa8.55□□□□□ -1.04
CCDC39-207ENST00000495817 USP2O75604 605 aaPredicted RBP8.55□□□□□ -1.04
CCDC39-207ENST00000495817 CLSTN1O94985 981 aa8.55□□□□□ -1.04
CCDC39-207ENST00000495817 ERVFC1P60507 584 aa8.55□□□□□ -1.04
CCDC39-207ENST00000495817 RBM10P98175 930 aaKnown RBP8.55□□□□□ -1.04
CCDC39-207ENST00000495817 MRM1Q6IN84 353 aaKnown RBP8.55□□□□□ -1.04
CCDC39-207ENST00000495817 LILRB2Q8N423 598 aa8.55□□□□□ -1.04
CCDC39-207ENST00000495817 ARHGEF39Q8N4T4 335 aa8.55□□□□□ -1.04
CCDC39-207ENST00000495817 HHIPL1Q96JK4 782 aa8.55□□□□□ -1.04
CCDC39-207ENST00000495817 ZDHHC15Q96MV8 337 aa8.55□□□□□ -1.04
CCDC39-207ENST00000495817 EPN3Q9H201 632 aa8.55□□□□□ -1.04
CCDC39-207ENST00000495817 CGGBP1Q9UFW8 167 aaPredicted RBP8.55□□□□□ -1.04
CCDC39-207ENST00000495817 EBF1Q9UH73 591 aa8.55□□□□□ -1.04
CCDC39-207ENST00000495817 NRDCO43847 1150 aa8.54□□□□□ -1.04
CCDC39-207ENST00000495817 NCLP19338 710 aaKnown RBP8.54□□□□□ -1.04
CCDC39-207ENST00000495817 RTP2Q5QGT7 225 aa8.54□□□□□ -1.04
CCDC39-207ENST00000495817 POMZP3Q6PJE2 187 aa8.54□□□□□ -1.04
CCDC39-207ENST00000495817 MPZL3Q6UWV2 235 aa8.54□□□□□ -1.04
CCDC39-207ENST00000495817 CEP128Q6ZU80 1094 aa8.54□□□□□ -1.04
CCDC39-207ENST00000495817 JMYQ8N9B5 988 aa8.54□□□□□ -1.04
CCDC39-207ENST00000495817 SH3TC2Q8TF17 1288 aa8.54□□□□□ -1.04
CCDC39-207ENST00000495817 APBA2Q99767 749 aa8.54□□□□□ -1.04
CCDC39-207ENST00000495817 SLC6A17Q9H1V8 727 aa8.54□□□□□ -1.04
CCDC39-207ENST00000495817 AP5S1Q9NUS5 200 aa8.54□□□□□ -1.04
CCDC39-207ENST00000495817 A0A1W2PQ45 241 aaPredicted RBP8.53□□□□□ -1.04
CCDC39-207ENST00000495817 A0A1W2PQY0 241 aa8.53□□□□□ -1.04
CCDC39-207ENST00000495817 FADS2P1A8MWK0 482 aa8.53□□□□□ -1.04
CCDC39-207ENST00000495817 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.53□□□□□ -1.04
CCDC39-207ENST00000495817 SLC14A2Q15849 920 aa8.53□□□□□ -1.04
CCDC39-207ENST00000495817 POU5F2Q8N7G0 328 aa8.53□□□□□ -1.04
CCDC39-207ENST00000495817 NAT16Q8N8M0 369 aa8.53□□□□□ -1.04
CCDC39-207ENST00000495817 ADCY4Q8NFM4 1077 aa8.53□□□□□ -1.04
CCDC39-207ENST00000495817 FGD4Q96M96 766 aa8.53□□□□□ -1.04
CCDC39-207ENST00000495817 KRTAP4-8Q9BYQ9 185 aa8.53□□□□□ -1.04
CCDC39-207ENST00000495817 RNF32Q9H0A6 362 aa8.53□□□□□ -1.04
CCDC39-207ENST00000495817 GPR160Q9UJ42 338 aa8.53□□□□□ -1.04
CCDC39-207ENST00000495817 SUGT1Q9Y2Z0 365 aa8.53□□□□□ -1.04
CCDC39-207ENST00000495817 SBNO2Q9Y2G9 1366 aa8.52□□□□□ -1.05
CCDC39-207ENST00000495817 ANKRD62A6NC57 917 aa8.52□□□□□ -1.05
CCDC39-207ENST00000495817 LRRC10BA6NIK2 292 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms