RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 APEX2Q9UBZ4 518 aa8.58□□□□□ -1.04
SSB-212ENST00000494051 CGGBP1Q9UFW8 167 aaPredicted RBP8.58□□□□□ -1.04
SSB-212ENST00000494051 VAMP4O75379 141 aa8.57□□□□□ -1.04
SSB-212ENST00000494051 SLC14A2Q15849 920 aa8.57□□□□□ -1.04
SSB-212ENST00000494051 RTP2Q5QGT7 225 aa8.57□□□□□ -1.04
SSB-212ENST00000494051 ARHGEF39Q8N4T4 335 aa8.57□□□□□ -1.04
SSB-212ENST00000494051 CELF2-AS1Q8N7Q2 184 aa8.57□□□□□ -1.04
SSB-212ENST00000494051 NAT16Q8N8M0 369 aa8.57□□□□□ -1.04
SSB-212ENST00000494051 HHIPL1Q96JK4 782 aa8.57□□□□□ -1.04
SSB-212ENST00000494051 FCRL2Q96LA5 508 aaPredicted RBP8.57□□□□□ -1.04
SSB-212ENST00000494051 AKT3Q9Y243 479 aa8.57□□□□□ -1.04
SSB-212ENST00000494051 RNF114Q9Y508 228 aa8.57□□□□□ -1.04
SSB-212ENST00000494051 KLF4O43474 513 aa8.56□□□□□ -1.04
SSB-212ENST00000494051 GJB6O95452 261 aa8.56□□□□□ -1.04
SSB-212ENST00000494051 GLI1P08151 1106 aa8.56□□□□□ -1.04
SSB-212ENST00000494051 GTF2F1P35269 517 aaKnown RBP eCLIP8.56□□□□□ -1.04
SSB-212ENST00000494051 ZNF143P52747 638 aaPredicted RBP8.56□□□□□ -1.04
SSB-212ENST00000494051 DPY19L1Q2PZI1 675 aa8.56□□□□□ -1.04
SSB-212ENST00000494051 TIGD5Q53EQ6 642 aa8.56□□□□□ -1.04
SSB-212ENST00000494051 CEP128Q6ZU80 1094 aa8.56□□□□□ -1.04
SSB-212ENST00000494051 CKAP2LQ8IYA6 745 aa8.56□□□□□ -1.04
SSB-212ENST00000494051 RCC1LQ96I51 464 aaKnown RBP8.56□□□□□ -1.04
SSB-212ENST00000494051 FCRL3Q96P31 734 aaPredicted RBP8.56□□□□□ -1.04
SSB-212ENST00000494051 TRIM55Q9BYV6 548 aa8.56□□□□□ -1.04
SSB-212ENST00000494051 SP110Q9HB58 689 aa8.56□□□□□ -1.04
SSB-212ENST00000494051 ERVK13-1Q9NX77 482 aa8.56□□□□□ -1.04
SSB-212ENST00000494051 GPR160Q9UJ42 338 aa8.56□□□□□ -1.04
SSB-212ENST00000494051 IFNGR1P15260 489 aa8.55□□□□□ -1.04
SSB-212ENST00000494051 YBX3P16989 372 aaKnown RBP eCLIP8.55□□□□□ -1.04
SSB-212ENST00000494051 SV2CQ496J9 727 aa8.55□□□□□ -1.04
SSB-212ENST00000494051 MRM1Q6IN84 353 aaKnown RBP8.55□□□□□ -1.04
SSB-212ENST00000494051 MPZL3Q6UWV2 235 aa8.55□□□□□ -1.04
SSB-212ENST00000494051 LILRA2Q8N149 483 aa8.55□□□□□ -1.04
SSB-212ENST00000494051 BVESQ8NE79 360 aa8.55□□□□□ -1.04
SSB-212ENST00000494051 LIN37Q96GY3 246 aaPredicted RBP8.55□□□□□ -1.04
SSB-212ENST00000494051 RNF32Q9H0A6 362 aa8.55□□□□□ -1.04
SSB-212ENST00000494051 TNFRSF10DQ9UBN6 386 aa8.55□□□□□ -1.04
SSB-212ENST00000494051 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.55□□□□□ -1.04
SSB-212ENST00000494051 STXBP3O00186 592 aa8.54□□□□□ -1.04
SSB-212ENST00000494051 NOP56O00567 594 aaKnown RBP8.54□□□□□ -1.04
SSB-212ENST00000494051 PSPNO60542 156 aa8.54□□□□□ -1.04
SSB-212ENST00000494051 KCNH1O95259 989 aa8.54□□□□□ -1.04
SSB-212ENST00000494051 KIR2DL1P43626 348 aaPredicted RBP8.54□□□□□ -1.04
SSB-212ENST00000494051 KIR2DL2P43627 348 aaPredicted RBP8.54□□□□□ -1.04
SSB-212ENST00000494051 RTP1P59025 263 aa8.54□□□□□ -1.04
SSB-212ENST00000494051 AMPD2Q01433 879 aa8.54□□□□□ -1.04
SSB-212ENST00000494051 NR0B2Q15466 257 aa8.54□□□□□ -1.04
SSB-212ENST00000494051 DDR2Q16832 855 aa8.54□□□□□ -1.04
SSB-212ENST00000494051 ZNF513Q8N8E2 541 aaPredicted RBP8.54□□□□□ -1.04
SSB-212ENST00000494051 LGR4Q9BXB1 951 aa8.54□□□□□ -1.04
SSB-212ENST00000494051 LRP2BPQ9P2M1 347 aa8.54□□□□□ -1.04
SSB-212ENST00000494051 GPR55Q9Y2T6 319 aaPredicted RBP8.54□□□□□ -1.04
SSB-212ENST00000494051 ZNF503-AS2A6NEH8 195 aa8.53□□□□□ -1.04
SSB-212ENST00000494051 SUSD5O60279 629 aa8.53□□□□□ -1.04
SSB-212ENST00000494051 RAB33AQ14088 237 aa8.53□□□□□ -1.04
SSB-212ENST00000494051 EEPD1Q7L9B9 569 aa8.53□□□□□ -1.04
SSB-212ENST00000494051 MCMBPQ9BTE3 642 aa8.53□□□□□ -1.04
SSB-212ENST00000494051 EMC9Q9Y3B6 208 aa8.53□□□□□ -1.04
SSB-212ENST00000494051 NOTOA8MTQ0 251 aa8.52□□□□□ -1.05
SSB-212ENST00000494051 FADS2P1A8MWK0 482 aa8.52□□□□□ -1.05
SSB-212ENST00000494051 GALK1P51570 392 aa8.52□□□□□ -1.05
SSB-212ENST00000494051 GRB10Q13322 594 aa8.52□□□□□ -1.05
SSB-212ENST00000494051 POMZP3Q6PJE2 187 aa8.52□□□□□ -1.05
SSB-212ENST00000494051 SIRT2Q8IXJ6 389 aa8.52□□□□□ -1.05
SSB-212ENST00000494051 CRACR2BQ8N4Y2 399 aaPredicted RBP8.52□□□□□ -1.05
SSB-212ENST00000494051 TMEM52Q8NDY8 209 aa8.52□□□□□ -1.05
SSB-212ENST00000494051 AURKAO14965 403 aa8.51□□□□□ -1.05
SSB-212ENST00000494051 U2SURPO15042 1029 aaKnown RBP8.51□□□□□ -1.05
SSB-212ENST00000494051 FGF10O15520 208 aaPredicted RBP8.51□□□□□ -1.05
SSB-212ENST00000494051 NRDCO43847 1150 aa8.51□□□□□ -1.05
SSB-212ENST00000494051 SEPHS1P49903 392 aa8.51□□□□□ -1.05
SSB-212ENST00000494051 SNX17Q15036 470 aa8.51□□□□□ -1.05
SSB-212ENST00000494051 SF3A1Q15459 793 aaKnown RBP8.51□□□□□ -1.05
SSB-212ENST00000494051 C2orf71A6NGG8 1288 aa8.5□□□□□ -1.05
SSB-212ENST00000494051 LRRC10BA6NIK2 292 aa8.5□□□□□ -1.05
SSB-212ENST00000494051 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.5□□□□□ -1.05
SSB-212ENST00000494051 ITGAVP06756 1048 aa8.5□□□□□ -1.05
SSB-212ENST00000494051 MLANAQ16655 118 aa8.5□□□□□ -1.05
SSB-212ENST00000494051 HSF5Q4G112 596 aaPredicted RBP8.5□□□□□ -1.05
SSB-212ENST00000494051 HLA-DQA1Q5Y7H0 255 aa8.5□□□□□ -1.05
SSB-212ENST00000494051 CYP2R1Q6VVX0 501 aa8.5□□□□□ -1.05
SSB-212ENST00000494051 JAMLQ86YT9 394 aa8.5□□□□□ -1.05
SSB-212ENST00000494051 PTCHD1Q96NR3 888 aa8.5□□□□□ -1.05
SSB-212ENST00000494051 PLCD4Q9BRC7 762 aa8.5□□□□□ -1.05
SSB-212ENST00000494051 CWC22Q9HCG8 908 aaKnown RBP8.5□□□□□ -1.05
SSB-212ENST00000494051 FAM53CQ9NYF3 392 aa8.5□□□□□ -1.05
SSB-212ENST00000494051 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.5□□□□□ -1.05
SSB-212ENST00000494051 BACE2Q9Y5Z0 518 aa8.5□□□□□ -1.05
SSB-212ENST00000494051 TAF6LQ9Y6J9 622 aa8.5□□□□□ -1.05
SSB-212ENST00000494051 A0A1W2PQ45 241 aaPredicted RBP8.49□□□□□ -1.05
SSB-212ENST00000494051 A0A1W2PQY0 241 aa8.49□□□□□ -1.05
SSB-212ENST00000494051 WTIPA6NIX2 430 aaPredicted RBP8.49□□□□□ -1.05
SSB-212ENST00000494051 TBC1D8O95759 1140 aa8.49□□□□□ -1.05
SSB-212ENST00000494051 EFEMP2O95967 443 aa8.49□□□□□ -1.05
SSB-212ENST00000494051 EEF1DP3Q658K8 133 aa8.49□□□□□ -1.05
SSB-212ENST00000494051 GTF2IRD2BQ6EKJ0 949 aa8.49□□□□□ -1.05
SSB-212ENST00000494051 RCSD1Q6JBY9 416 aa8.49□□□□□ -1.05
SSB-212ENST00000494051 GALNT18Q6P9A2 607 aa8.49□□□□□ -1.05
SSB-212ENST00000494051 GTF2IRD2Q86UP8 949 aa8.49□□□□□ -1.05
SSB-212ENST00000494051 NLRX1Q86UT6 975 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms