RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 LBX2Q6XYB7 198 aa12.49□□□□□ -0.41
CACNA1C-227ENST00000491104 ZSCAN31Q96LW9 406 aaPredicted RBP12.49□□□□□ -0.41
CACNA1C-227ENST00000491104 AGBL1Q96MI9 1066 aa12.49□□□□□ -0.41
CACNA1C-227ENST00000491104 LZTS2Q9BRK4 669 aa12.49□□□□□ -0.41
CACNA1C-227ENST00000491104 SPZ1Q9BXG8 430 aa12.49□□□□□ -0.41
CACNA1C-227ENST00000491104 SLC26A6Q9BXS9 759 aa12.49□□□□□ -0.41
CACNA1C-227ENST00000491104 SLC38A10Q9HBR0 1119 aa12.49□□□□□ -0.41
CACNA1C-227ENST00000491104 SH2B1Q9NRF2 756 aaPredicted RBP12.49□□□□□ -0.41
CACNA1C-227ENST00000491104 CCDC196A0A1B0GTZ2 297 aa12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 JAK2O60674 1132 aa12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 PPP1R11O60927 126 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 GCLCP48506 637 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 MCM2P49736 904 aa12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 ERVK-9P63128 1117 aa12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 ERVK-24P63145 666 aa12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 USH1GQ495M9 461 aa12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 C17orf99Q6UX52 265 aa12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 HSCBQ8IWL3 235 aa12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 NSUN7Q8NE18 718 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 SNX21Q969T3 373 aa12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 MTMR8Q96EF0 704 aa12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 TSHZ2Q9NRE2 1034 aa12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 WBP1LQ9NX94 342 aa12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 ZNF214Q9UL59 606 aaPredicted RBP12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 RABGAP1Q9Y3P9 1069 aa12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 RIPK3Q9Y572 518 aa12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 PLXNB2O15031 1838 aa12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 RBBP6Q7Z6E9 1792 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-227ENST00000491104 K7ELQ4 463 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 ZBTB5O15062 677 aa12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 IFNAR1P17181 557 aa12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 SNRNP48Q6IEG0 339 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 MB21D1Q8N884 522 aa12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 JMYQ8N9B5 988 aa12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 GTF3C2Q8WUA4 911 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 GPKOWQ92917 476 aaPredicted RBP eCLIP12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 COA7Q96BR5 231 aa12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 RRP36Q96EU6 259 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 DDX11Q96FC9 970 aa12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 BEGAINQ9BUH8 593 aa12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 MOV10L1Q9BXT6 1211 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 SPATC1LQ9H0A9 340 aa12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 PORCNQ9H237 461 aa12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 HOMER2Q9NSB8 354 aa12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 MORF4L1Q9UBU8 362 aa12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 CCPG1Q9ULG6 757 aa12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 V9GY48 417 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-227ENST00000491104 PTPDC1A2A3K4 754 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 PRPF3O43395 683 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 FMNL1O95466 1100 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 ICAM1P05362 532 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 ALAS1P13196 640 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 SMARCA1P28370 1054 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 STAT3P40763 770 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 FOSBP53539 338 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 SSRP1Q08945 709 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 PPP2R5BQ15173 497 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 FAM110CQ1W6H9 321 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 WDR78Q5VTH9 848 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 FBXO11Q86XK2 927 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 IL27Q8NEV9 243 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 GPRC5AQ8NFJ5 357 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 AIFM3Q96NN9 605 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 CFHR5Q9BXR6 569 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 ARHGAP39Q9C0H5 1083 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 EFCC1Q9HA90 598 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 FOXD4L1Q9NU39 408 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 SAGE1Q9NXZ1 904 aa12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 SEC63Q9UGP8 760 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-227ENST00000491104 DOCK3Q8IZD9 2030 aa12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 PNMA6FA0A0J9YX94 578 aa12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 GPR25O00155 361 aa12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 HSPA1AP0DMV8 641 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 HSPA1BP0DMV9 641 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 FDX1P10109 184 aa12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 FDPSP14324 419 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 ERCC3P19447 782 aa12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 CTGFP29279 349 aa12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 CAP1Q01518 475 aa12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 AKAP17AQ02040 695 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 PKN1Q16512 942 aa12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 MUM1L1Q5H9M0 696 aa12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 WWC2Q6AWC2 1192 aa12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 CPLX2Q6PUV4 134 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 HEATR3Q7Z4Q2 680 aa12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 NCAPG2Q86XI2 1143 aa12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 RIOX2Q8IUF8 465 aa12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 TEX13BQ9BXU2 312 aa12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 RNF26Q9BY78 433 aaPredicted RBP12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 RNF146Q9NTX7 359 aa12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 LCTP09848 1927 aa12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 ZNFX1Q9P2E3 1918 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-227ENST00000491104 STK36Q9NRP7 1315 aa12.44□□□□□ -0.42
CACNA1C-227ENST00000491104 ATP2A1O14983 1001 aa12.44□□□□□ -0.42
CACNA1C-227ENST00000491104 FOXN1O15353 648 aa12.44□□□□□ -0.42
CACNA1C-227ENST00000491104 CDKL5O76039 1030 aa12.44□□□□□ -0.42
CACNA1C-227ENST00000491104 OAZ1P54368 228 aa12.44□□□□□ -0.42
CACNA1C-227ENST00000491104 CUL4AQ13619 759 aa12.44□□□□□ -0.42
CACNA1C-227ENST00000491104 TYW1BQ6NUM6 668 aa12.44□□□□□ -0.42
CACNA1C-227ENST00000491104 TRIM22Q8IYM9 498 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms