RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 LEFTY1O75610 366 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 HSP90B1P14625 803 aaKnown RBP4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 AFMP43652 599 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 CDK8P49336 464 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 MFAP1P55081 439 aaKnown RBP4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 DAB2P98082 770 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 CDK5R2Q13319 367 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 AOC3Q16853 763 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 ZXDCQ2QGD7 858 aaPredicted RBP4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 CYP27C1Q4G0S4 372 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 MAP1SQ66K74 1059 aaPredicted RBP4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 CENPQQ7L2Z9 268 aaPredicted RBP4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 CYFIP1Q7L576 1253 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 RNF214Q8ND24 703 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 FRMD6Q96NE9 622 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 SMG5Q9UPR3 1016 aaKnown RBP4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 CTNND2Q9UQB3 1225 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 DAGLAQ9Y4D2 1042 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 AK5Q9Y6K8 562 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 MED14O60244 1454 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 ALS2Q96Q42 1657 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 PHLPP1O60346 1717 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 ZNF521Q96K83 1311 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 ZNF335Q9H4Z2 1342 aaPredicted RBP4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 PRR36Q9H6K5 1346 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 PLEKHG1Q9ULL1 1385 aa4.4□□□□□ -1.71
CRNKL1-203ENST00000490258 NSD3Q9BZ95 1437 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 PLCH1Q4KWH8 1693 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 CDK11BP21127 795 aaKnown RBP4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 FBLN1P23142 703 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 RBM25P49756 843 aaKnown RBP4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 LINC00310P59036 64 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 XPCQ01831 940 aaPredicted RBP4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 INPP5AQ14642 412 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 ZBTB37Q5TC79 503 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 MEI1Q5TIA1 1274 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 LLGL2Q6P1M3 1020 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 SV2BQ7L1I2 683 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 SMYD4Q8IYR2 804 aaPredicted RBP4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 PRAM1Q96QH2 718 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 DIRC2Q96SL1 478 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 CEP44Q9C0F1 390 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 IRF2BPLQ9H1B7 796 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 PRDM7Q9NQW5 492 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 RAD18Q9NS91 495 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 RTEL1Q9NZ71 1219 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 SPG7Q9UQ90 795 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 CNTNAP4Q9C0A0 1308 aa4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 COL16A1Q07092 1604 aaPredicted RBP4.39□□□□□ -1.71
CRNKL1-203ENST00000490258 SHANK3Q9BYB0 1731 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 FSD2A1L4K1 749 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 GFRA2O00451 464 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 HCLS1P14317 486 aaPredicted RBP4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 TMEM67Q5HYA8 995 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 LRFN4Q6PJG9 635 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 TMC4Q7Z404 712 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 FAM181AQ8N9Y4 354 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 KCNB2Q92953 911 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 CRELD1Q96HD1 420 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 HRASLS5Q96KN8 279 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 HEXIM2Q96MH2 286 aaKnown RBP4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 PUS7Q96PZ0 661 aaKnown RBP4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 TESK2Q96S53 571 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 CRBNQ96SW2 442 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 DUSP23Q9BVJ7 150 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 EMILIN2Q9BXX0 1053 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 GZF1Q9H116 711 aaPredicted RBP4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 NSUN3Q9H649 340 aaKnown RBP4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 FBRSQ9HAH7 460 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 PLAGL2Q9UPG8 496 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 USP19O94966 1318 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 LTBP4Q8N2S1 1624 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 KIF1AQ12756 1690 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 USP54Q70EL1 1684 aa4.38□□□□□ -1.71
CRNKL1-203ENST00000490258 MED1Q15648 1581 aaPredicted RBP4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 E9PSI1 815 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 SLFN14P0C7P3 912 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 FAM87AP0C7U9 286 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 KCNA6P17658 529 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 GLDCP23378 1020 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 CAP2P40123 477 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 OXCT1P55809 520 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 RPS26P62854 115 aaKnown RBP4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 ATP2B2Q01814 1243 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 SLBPQ14493 270 aaKnown RBP eCLIP4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 IFI16Q16666 785 aaKnown RBP4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 EAPPQ56P03 285 aaPredicted RBP4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 PPM1JQ5JR12 505 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 CC2D1BQ5T0F9 858 aaKnown RBP4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 LDLRAD1Q5T700 205 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 L1TD1Q5T7N2 865 aaKnown RBP4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 AGMOQ6ZNB7 445 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 KIRREL1Q96J84 757 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 PKNOX2Q96KN3 472 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 KCNC2Q96PR1 638 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 TNKS2Q9H2K2 1166 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 ANTXR1Q9H6X2 564 aa4.37□□□□□ -1.71
CRNKL1-203ENST00000490258 LGR6Q9HBX8 967 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms