RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 STXBP3O00186 592 aa8.26□□□□□ -1.09
CCDC39-206ENST00000489868 ZNF143P52747 638 aaPredicted RBP8.26□□□□□ -1.09
CCDC39-206ENST00000489868 KIR3DS1Q14943 382 aa8.26□□□□□ -1.09
CCDC39-206ENST00000489868 NR0B2Q15466 257 aa8.26□□□□□ -1.09
CCDC39-206ENST00000489868 KCNMB1Q16558 191 aa8.26□□□□□ -1.09
CCDC39-206ENST00000489868 DPY19L1Q2PZI1 675 aa8.26□□□□□ -1.09
CCDC39-206ENST00000489868 ANKS4BQ8N8V4 417 aa8.26□□□□□ -1.09
CCDC39-206ENST00000489868 ABHD4Q8TB40 342 aa8.26□□□□□ -1.09
CCDC39-206ENST00000489868 RNF32Q9H0A6 362 aa8.26□□□□□ -1.09
CCDC39-206ENST00000489868 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.26□□□□□ -1.09
CCDC39-206ENST00000489868 AKT3Q9Y243 479 aa8.26□□□□□ -1.09
CCDC39-206ENST00000489868 GPR55Q9Y2T6 319 aaPredicted RBP8.26□□□□□ -1.09
CCDC39-206ENST00000489868 FGF10O15520 208 aaPredicted RBP8.25□□□□□ -1.09
CCDC39-206ENST00000489868 OXR1Q8N573 874 aa8.25□□□□□ -1.09
CCDC39-206ENST00000489868 BVESQ8NE79 360 aa8.25□□□□□ -1.09
CCDC39-206ENST00000489868 SYTL4Q96C24 671 aaPredicted RBP8.25□□□□□ -1.09
CCDC39-206ENST00000489868 LIN37Q96GY3 246 aaPredicted RBP8.25□□□□□ -1.09
CCDC39-206ENST00000489868 MRGPRX3Q96LB0 322 aa8.25□□□□□ -1.09
CCDC39-206ENST00000489868 PLCD4Q9BRC7 762 aa8.25□□□□□ -1.09
CCDC39-206ENST00000489868 R3HCC1Q9Y3T6 440 aaKnown RBP8.25□□□□□ -1.09
CCDC39-206ENST00000489868 AURKAO14965 403 aa8.24□□□□□ -1.09
CCDC39-206ENST00000489868 KCNH1O95259 989 aa8.24□□□□□ -1.09
CCDC39-206ENST00000489868 ITGAVP06756 1048 aa8.24□□□□□ -1.09
CCDC39-206ENST00000489868 GLI1P08151 1106 aa8.24□□□□□ -1.09
CCDC39-206ENST00000489868 RAC2P15153 192 aa8.24□□□□□ -1.09
CCDC39-206ENST00000489868 KIR2DL1P43626 348 aaPredicted RBP8.24□□□□□ -1.09
CCDC39-206ENST00000489868 KIR2DL2P43627 348 aaPredicted RBP8.24□□□□□ -1.09
CCDC39-206ENST00000489868 POU4F1Q01851 419 aa8.24□□□□□ -1.09
CCDC39-206ENST00000489868 CYP4F3Q08477 520 aa8.24□□□□□ -1.09
CCDC39-206ENST00000489868 GRB10Q13322 594 aa8.24□□□□□ -1.09
CCDC39-206ENST00000489868 SLC10A6Q3KNW5 377 aa8.24□□□□□ -1.09
CCDC39-206ENST00000489868 CEP128Q6ZU80 1094 aa8.24□□□□□ -1.09
CCDC39-206ENST00000489868 SLCO6A1Q86UG4 719 aa8.24□□□□□ -1.09
CCDC39-206ENST00000489868 PPP1R14AQ96A00 147 aa8.24□□□□□ -1.09
CCDC39-206ENST00000489868 ASIC4Q96FT7 647 aa8.24□□□□□ -1.09
CCDC39-206ENST00000489868 CHRNEQ04844 493 aa8.23□□□□□ -1.09
CCDC39-206ENST00000489868 ZNF227Q86WZ6 799 aa8.23□□□□□ -1.09
CCDC39-206ENST00000489868 TRIM59Q8IWR1 403 aa8.23□□□□□ -1.09
CCDC39-206ENST00000489868 CKAP2LQ8IYA6 745 aa8.23□□□□□ -1.09
CCDC39-206ENST00000489868 JMJD8Q96S16 334 aa8.23□□□□□ -1.09
CCDC39-206ENST00000489868 TNFRSF10DQ9UBN6 386 aa8.23□□□□□ -1.09
CCDC39-206ENST00000489868 MSRB2Q9Y3D2 182 aa8.23□□□□□ -1.09
CCDC39-206ENST00000489868 NRDCO43847 1150 aa8.22□□□□□ -1.09
CCDC39-206ENST00000489868 RTP1P59025 263 aa8.22□□□□□ -1.09
CCDC39-206ENST00000489868 AMPD2Q01433 879 aa8.22□□□□□ -1.09
CCDC39-206ENST00000489868 RBL2Q08999 1139 aa8.22□□□□□ -1.09
CCDC39-206ENST00000489868 SV2CQ496J9 727 aa8.22□□□□□ -1.09
CCDC39-206ENST00000489868 HSF5Q4G112 596 aaPredicted RBP8.22□□□□□ -1.09
CCDC39-206ENST00000489868 TMEM67Q5HYA8 995 aa8.22□□□□□ -1.09
CCDC39-206ENST00000489868 GTF2IRD2BQ6EKJ0 949 aa8.22□□□□□ -1.09
CCDC39-206ENST00000489868 RCSD1Q6JBY9 416 aa8.22□□□□□ -1.09
CCDC39-206ENST00000489868 EEPD1Q7L9B9 569 aa8.22□□□□□ -1.09
CCDC39-206ENST00000489868 GTF2IRD2Q86UP8 949 aa8.22□□□□□ -1.09
CCDC39-206ENST00000489868 NLRX1Q86UT6 975 aa8.22□□□□□ -1.09
CCDC39-206ENST00000489868 SPPL2CQ8IUH8 684 aa8.22□□□□□ -1.09
CCDC39-206ENST00000489868 LILRA2Q8N149 483 aa8.22□□□□□ -1.09
CCDC39-206ENST00000489868 PTCHD1Q96NR3 888 aa8.22□□□□□ -1.09
CCDC39-206ENST00000489868 GPR160Q9UJ42 338 aa8.22□□□□□ -1.09
CCDC39-206ENST00000489868 CAPNS1P04632 268 aa8.21□□□□□ -1.1
CCDC39-206ENST00000489868 NAT2P11245 290 aa8.21□□□□□ -1.1
CCDC39-206ENST00000489868 ENDOUP21128 410 aaKnown RBP8.21□□□□□ -1.1
CCDC39-206ENST00000489868 NOP2P46087 812 aaKnown RBP8.21□□□□□ -1.1
CCDC39-206ENST00000489868 SERINC3Q13530 473 aa8.21□□□□□ -1.1
CCDC39-206ENST00000489868 SIRT2Q8IXJ6 389 aa8.21□□□□□ -1.1
CCDC39-206ENST00000489868 BTN2A2Q8WVV5 523 aa8.21□□□□□ -1.1
CCDC39-206ENST00000489868 SREK1Q8WXA9 508 aaKnown RBP8.21□□□□□ -1.1
CCDC39-206ENST00000489868 ARMC5Q96C12 935 aa8.21□□□□□ -1.1
CCDC39-206ENST00000489868 TRIM55Q9BYV6 548 aa8.21□□□□□ -1.1
CCDC39-206ENST00000489868 RNF114Q9Y508 228 aa8.21□□□□□ -1.1
CCDC39-206ENST00000489868 C2orf71A6NGG8 1288 aa8.2□□□□□ -1.1
CCDC39-206ENST00000489868 GRIA2P42262 883 aa8.2□□□□□ -1.1
CCDC39-206ENST00000489868 SF1Q15637 639 aaKnown RBP8.2□□□□□ -1.1
CCDC39-206ENST00000489868 NAT16Q8N8M0 369 aa8.2□□□□□ -1.1
CCDC39-206ENST00000489868 COPS5Q92905 334 aa8.2□□□□□ -1.1
CCDC39-206ENST00000489868 FMNL2Q96PY5 1086 aa8.2□□□□□ -1.1
CCDC39-206ENST00000489868 KCNK12Q9HB15 430 aa8.2□□□□□ -1.1
CCDC39-206ENST00000489868 BACE2Q9Y5Z0 518 aa8.2□□□□□ -1.1
CCDC39-206ENST00000489868 SCRN1Q12765 414 aa8.19□□□□□ -1.1
CCDC39-206ENST00000489868 SF3A1Q15459 793 aaKnown RBP8.19□□□□□ -1.1
CCDC39-206ENST00000489868 SLC14A2Q15849 920 aa8.19□□□□□ -1.1
CCDC39-206ENST00000489868 PRR23BQ6ZRT6 265 aa8.19□□□□□ -1.1
CCDC39-206ENST00000489868 KRTAP4-8Q9BYQ9 185 aa8.19□□□□□ -1.1
CCDC39-206ENST00000489868 NKX2-4Q9H2Z4 354 aa8.19□□□□□ -1.1
CCDC39-206ENST00000489868 GPRC5CQ9NQ84 441 aa8.19□□□□□ -1.1
CCDC39-206ENST00000489868 PPP1R1BQ9UD71 204 aaPredicted RBP8.19□□□□□ -1.1
CCDC39-206ENST00000489868 YBX2Q9Y2T7 364 aaKnown RBP8.19□□□□□ -1.1
CCDC39-206ENST00000489868 A0A1W2PQU0 124 aa8.18□□□□□ -1.1
CCDC39-206ENST00000489868 NOP56O00567 594 aaKnown RBP8.18□□□□□ -1.1
CCDC39-206ENST00000489868 PAX4O43316 350 aa8.18□□□□□ -1.1
CCDC39-206ENST00000489868 MSL3P1P0C860 447 aa8.18□□□□□ -1.1
CCDC39-206ENST00000489868 NBPF6Q5VWK0 638 aa8.18□□□□□ -1.1
CCDC39-206ENST00000489868 EEF1DP3Q658K8 133 aa8.18□□□□□ -1.1
CCDC39-206ENST00000489868 POMZP3Q6PJE2 187 aa8.18□□□□□ -1.1
CCDC39-206ENST00000489868 NBPF4Q96M43 638 aa8.18□□□□□ -1.1
CCDC39-206ENST00000489868 DNAJC2Q99543 621 aaKnown RBP8.18□□□□□ -1.1
CCDC39-206ENST00000489868 LRP2BPQ9P2M1 347 aa8.18□□□□□ -1.1
CCDC39-206ENST00000489868 IMPACTQ9P2X3 320 aa8.18□□□□□ -1.1
CCDC39-206ENST00000489868 A0A1W2PQ45 241 aaPredicted RBP8.17□□□□□ -1.1
CCDC39-206ENST00000489868 A0A1W2PQY0 241 aa8.17□□□□□ -1.1
CCDC39-206ENST00000489868 ARNTLO00327 626 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms