RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 TRERF1Q96PN7 1200 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 DISC1Q9NRI5 854 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 LTBP4Q8N2S1 1624 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 TTC26A0AVF1 554 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 GOLGA6L9A6NEM1 432 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 EFCAB8A8MWE9 144 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 ZRANB2O95218 330 aaKnown RBP eCLIP14.28□□□□□ -0.12
CLIC4-202ENST00000488683 TBC1D8O95759 1140 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 PARP1P09874 1014 aaKnown RBP14.28□□□□□ -0.12
CLIC4-202ENST00000488683 RASA1P20936 1047 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 TXNRD1Q16881 649 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 FILIP1LQ4L180 1135 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 COA7Q96BR5 231 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 CTAGE1Q96RT6 745 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 PNKPQ96T60 521 aa14.28□□□□□ -0.12
CLIC4-202ENST00000488683 RTCBQ9Y3I0 505 aaKnown RBP14.28□□□□□ -0.12
CLIC4-202ENST00000488683 MYH1P12882 1939 aa14.27□□□□□ -0.12
CLIC4-202ENST00000488683 STXBP3O00186 592 aa14.27□□□□□ -0.12
CLIC4-202ENST00000488683 RIMBP2O15034 1052 aa14.27□□□□□ -0.12
CLIC4-202ENST00000488683 CALML3P27482 149 aa14.27□□□□□ -0.12
CLIC4-202ENST00000488683 NAPAP54920 295 aa14.27□□□□□ -0.12
CLIC4-202ENST00000488683 ST5P78524 1137 aa14.27□□□□□ -0.12
CLIC4-202ENST00000488683 ATP2B2Q01814 1243 aa14.27□□□□□ -0.12
CLIC4-202ENST00000488683 ZNF658Q5TYW1 1059 aaPredicted RBP14.27□□□□□ -0.12
CLIC4-202ENST00000488683 ARL6IP4Q66PJ3 421 aaKnown RBP14.27□□□□□ -0.12
CLIC4-202ENST00000488683 FAM196AQ6ZSG2 479 aa14.27□□□□□ -0.12
CLIC4-202ENST00000488683 PIGSQ96S52 555 aa14.27□□□□□ -0.12
CLIC4-202ENST00000488683 AGPAT5Q9NUQ2 364 aa14.27□□□□□ -0.12
CLIC4-202ENST00000488683 LIMA1Q9UHB6 759 aaKnown RBP14.27□□□□□ -0.12
CLIC4-202ENST00000488683 RWDD2AQ9UIY3 292 aa14.27□□□□□ -0.12
CLIC4-202ENST00000488683 USP17L5A8MUK1 530 aa14.27□□□□□ -0.13
CLIC4-202ENST00000488683 RGL2O15211 777 aa14.27□□□□□ -0.13
CLIC4-202ENST00000488683 RAD21O60216 631 aa14.27□□□□□ -0.13
CLIC4-202ENST00000488683 PLCG1P19174 1290 aa14.27□□□□□ -0.13
CLIC4-202ENST00000488683 RFC4P35249 363 aa14.27□□□□□ -0.13
CLIC4-202ENST00000488683 LONP1P36776 959 aaKnown RBP14.27□□□□□ -0.13
CLIC4-202ENST00000488683 UBA7P41226 1012 aa14.27□□□□□ -0.13
CLIC4-202ENST00000488683 BMS1Q14692 1282 aaKnown RBP14.27□□□□□ -0.13
CLIC4-202ENST00000488683 SPTY2D1Q68D10 685 aaPredicted RBP14.27□□□□□ -0.13
CLIC4-202ENST00000488683 CC2D1AQ6P1N0 951 aaPredicted RBP14.27□□□□□ -0.13
CLIC4-202ENST00000488683 LRRC47Q8N1G4 583 aaKnown RBP14.27□□□□□ -0.13
CLIC4-202ENST00000488683 REXO2Q9Y3B8 237 aaKnown RBP14.27□□□□□ -0.13
CLIC4-202ENST00000488683 DUSP10Q9Y6W6 482 aa14.27□□□□□ -0.13
CLIC4-202ENST00000488683 ROBO3Q96MS0 1386 aa14.27□□□□□ -0.13
CLIC4-202ENST00000488683 TAF1LQ8IZX4 1826 aa14.27□□□□□ -0.13
CLIC4-202ENST00000488683 KLRC4O43908 158 aa14.26□□□□□ -0.13
CLIC4-202ENST00000488683 UFL1O94874 794 aa14.26□□□□□ -0.13
CLIC4-202ENST00000488683 MRPS25P82663 173 aaKnown RBP14.26□□□□□ -0.13
CLIC4-202ENST00000488683 STK4Q13043 487 aa14.26□□□□□ -0.13
CLIC4-202ENST00000488683 KCTD19Q17RG1 926 aaPredicted RBP14.26□□□□□ -0.13
CLIC4-202ENST00000488683 GLIS3Q8NEA6 775 aa14.26□□□□□ -0.13
CLIC4-202ENST00000488683 ANKS1AQ92625 1134 aa14.26□□□□□ -0.13
CLIC4-202ENST00000488683 TRIM47Q96LD4 638 aa14.26□□□□□ -0.13
CLIC4-202ENST00000488683 GDAP1L1Q96MZ0 367 aa14.26□□□□□ -0.13
CLIC4-202ENST00000488683 LRRC10BA6NIK2 292 aa14.26□□□□□ -0.13
CLIC4-202ENST00000488683 SHROOM1Q2M3G4 852 aaPredicted RBP14.26□□□□□ -0.13
CLIC4-202ENST00000488683 DYMQ7RTS9 669 aa14.26□□□□□ -0.13
CLIC4-202ENST00000488683 POTEDQ86YR6 584 aa14.26□□□□□ -0.13
CLIC4-202ENST00000488683 CEP95Q96GE4 821 aa14.26□□□□□ -0.13
CLIC4-202ENST00000488683 SH3GLB2Q9NR46 395 aa14.26□□□□□ -0.13
CLIC4-202ENST00000488683 DDX60LQ5H9U9 1706 aaKnown RBP14.26□□□□□ -0.13
CLIC4-202ENST00000488683 TXKP42681 527 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 CDK8P49336 464 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 RSRC2Q7L4I2 434 aaKnown RBP14.25□□□□□ -0.13
CLIC4-202ENST00000488683 NEK11Q8NG66 645 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 WDR66Q8TBY9 1149 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 CAPZA3Q96KX2 299 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 EYA3Q99504 573 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 RTFDC1Q9BY42 306 aaPredicted RBP14.25□□□□□ -0.13
CLIC4-202ENST00000488683 SLC39A2Q9NP94 309 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 SNED1Q8TER0 1413 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 ITIH6Q6UXX5 1313 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 FAM170AA1A519 330 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 SMCO2A6NFE2 343 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 KIF5CO60282 957 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 ZMYND10O75800 440 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 ARHGAP25P42331 645 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 CHMP4BP1P59074 171 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 CYP27A1Q02318 531 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 GRAPQ13588 217 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 MCM6Q14566 821 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 NOA1Q8NC60 698 aaKnown RBP14.25□□□□□ -0.13
CLIC4-202ENST00000488683 GRAPLQ8TC17 118 aaPredicted RBP14.25□□□□□ -0.13
CLIC4-202ENST00000488683 ZFP91Q96JP5 570 aaPredicted RBP14.25□□□□□ -0.13
CLIC4-202ENST00000488683 ANKZF1Q9H8Y5 726 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 LRRC4BQ9NT99 713 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 BARHL2Q9NY43 387 aa14.25□□□□□ -0.13
CLIC4-202ENST00000488683 PALM3A6NDB9 673 aaPredicted RBP14.24□□□□□ -0.13
CLIC4-202ENST00000488683 RCCD1A6NED2 376 aa14.24□□□□□ -0.13
CLIC4-202ENST00000488683 ZBTB22O15209 634 aa14.24□□□□□ -0.13
CLIC4-202ENST00000488683 PLEKP08567 350 aaPredicted RBP14.24□□□□□ -0.13
CLIC4-202ENST00000488683 FECHP22830 423 aa14.24□□□□□ -0.13
CLIC4-202ENST00000488683 GABPB1Q06547 395 aaPredicted RBP14.24□□□□□ -0.13
CLIC4-202ENST00000488683 TEX11Q8IYF3 940 aa14.24□□□□□ -0.13
CLIC4-202ENST00000488683 PCMTD1Q96MG8 357 aaPredicted RBP14.24□□□□□ -0.13
CLIC4-202ENST00000488683 NAA15Q9BXJ9 866 aaKnown RBP14.24□□□□□ -0.13
CLIC4-202ENST00000488683 GPCPD1Q9NPB8 672 aa14.24□□□□□ -0.13
CLIC4-202ENST00000488683 N4BP1O75113 896 aaKnown RBP14.24□□□□□ -0.13
CLIC4-202ENST00000488683 VPS72Q15906 364 aa14.24□□□□□ -0.13
CLIC4-202ENST00000488683 ANKRD40Q6AI12 368 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms