RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ATP2B1P20020 1258 aa10.79□□□□□ -0.68
SF3B1-211ENST00000487698 ATP2C1P98194 919 aaPredicted RBP10.79□□□□□ -0.68
SF3B1-211ENST00000487698 QRICH1Q2TAL8 776 aa10.79□□□□□ -0.68
SF3B1-211ENST00000487698 VCPKMTQ9H867 229 aa10.79□□□□□ -0.68
SF3B1-211ENST00000487698 GOPCQ9HD26 462 aa10.79□□□□□ -0.68
SF3B1-211ENST00000487698 GGA3Q9NZ52 723 aa10.79□□□□□ -0.68
SF3B1-211ENST00000487698 MRVI1Q9Y6F6 885 aa10.79□□□□□ -0.68
SF3B1-211ENST00000487698 CTAGE5O15320 804 aa10.79□□□□□ -0.68
SF3B1-211ENST00000487698 CTNND1O60716 968 aaKnown RBP10.79□□□□□ -0.68
SF3B1-211ENST00000487698 KINO60870 393 aaKnown RBP10.79□□□□□ -0.68
SF3B1-211ENST00000487698 DDNO94850 711 aaPredicted RBP10.79□□□□□ -0.68
SF3B1-211ENST00000487698 ADCY7P51828 1080 aa10.79□□□□□ -0.68
SF3B1-211ENST00000487698 GRIN1Q05586 938 aa10.79□□□□□ -0.68
SF3B1-211ENST00000487698 CDC37Q16543 378 aaPredicted RBP10.79□□□□□ -0.68
SF3B1-211ENST00000487698 NBPF12Q5TAG4 269 aaPredicted RBP10.79□□□□□ -0.68
SF3B1-211ENST00000487698 KRT25Q7Z3Z0 450 aa10.79□□□□□ -0.68
SF3B1-211ENST00000487698 REXO1Q8N1G1 1221 aaKnown RBP10.79□□□□□ -0.68
SF3B1-211ENST00000487698 GLIS2Q9BZE0 524 aaPredicted RBP10.79□□□□□ -0.68
SF3B1-211ENST00000487698 SH2D4AQ9H788 454 aa10.79□□□□□ -0.68
SF3B1-211ENST00000487698 RIC8AQ9NPQ8 531 aa10.79□□□□□ -0.68
SF3B1-211ENST00000487698 PPP2R3BQ9Y5P8 575 aa10.79□□□□□ -0.68
SF3B1-211ENST00000487698 OTOFQ9HC10 1997 aa10.79□□□□□ -0.68
SF3B1-211ENST00000487698 PITPNM2Q9BZ72 1349 aa10.79□□□□□ -0.68
SF3B1-211ENST00000487698 TMEM232C9JQI7 657 aa10.78□□□□□ -0.68
SF3B1-211ENST00000487698 ZNF174Q15697 407 aa10.78□□□□□ -0.68
SF3B1-211ENST00000487698 SYDE2Q5VT97 1194 aa10.78□□□□□ -0.68
SF3B1-211ENST00000487698 SPICE1Q8N0Z3 855 aa10.78□□□□□ -0.68
SF3B1-211ENST00000487698 FERMT2Q96AC1 680 aa10.78□□□□□ -0.68
SF3B1-211ENST00000487698 ZNF112Q9UJU3 913 aa10.78□□□□□ -0.68
SF3B1-211ENST00000487698 ZNF202O95125 648 aa10.78□□□□□ -0.68
SF3B1-211ENST00000487698 CLK2P49760 499 aaKnown RBP10.78□□□□□ -0.68
SF3B1-211ENST00000487698 PTGDRQ13258 359 aa10.78□□□□□ -0.68
SF3B1-211ENST00000487698 NONOQ15233 471 aaKnown RBP eCLIP10.78□□□□□ -0.68
SF3B1-211ENST00000487698 INF2Q27J81 1249 aa10.78□□□□□ -0.68
SF3B1-211ENST00000487698 C9orf131Q5VYM1 1079 aa10.78□□□□□ -0.68
SF3B1-211ENST00000487698 DCAF15Q66K64 600 aa10.78□□□□□ -0.68
SF3B1-211ENST00000487698 CKAP2LQ8IYA6 745 aa10.78□□□□□ -0.68
SF3B1-211ENST00000487698 C4orf32Q8N8J7 132 aa10.78□□□□□ -0.68
SF3B1-211ENST00000487698 HOOK2Q96ED9 719 aa10.78□□□□□ -0.68
SF3B1-211ENST00000487698 TIGD1Q96MW7 591 aa10.78□□□□□ -0.68
SF3B1-211ENST00000487698 SCN4AP35499 1836 aa10.77□□□□□ -0.68
SF3B1-211ENST00000487698 PLA2G6O60733 806 aa10.77□□□□□ -0.69
SF3B1-211ENST00000487698 CCDC192P0DO97 292 aa10.77□□□□□ -0.69
SF3B1-211ENST00000487698 STAT2P52630 851 aa10.77□□□□□ -0.69
SF3B1-211ENST00000487698 FAM83BQ5T0W9 1011 aa10.77□□□□□ -0.69
SF3B1-211ENST00000487698 CCDC84Q86UT8 332 aaPredicted RBP10.77□□□□□ -0.69
SF3B1-211ENST00000487698 ZNF341Q9BYN7 854 aa10.77□□□□□ -0.69
SF3B1-211ENST00000487698 PANK2Q9BZ23 570 aa10.77□□□□□ -0.69
SF3B1-211ENST00000487698 CSRNP2Q9H175 543 aa10.77□□□□□ -0.69
SF3B1-211ENST00000487698 ADARB2Q9NS39 739 aaKnown RBP10.77□□□□□ -0.69
SF3B1-211ENST00000487698 PRR12Q9ULL5 1215 aa10.77□□□□□ -0.69
SF3B1-211ENST00000487698 WDR90Q96KV7 1748 aa10.77□□□□□ -0.69
SF3B1-211ENST00000487698 LMOD1P29536 600 aaPredicted RBP10.76□□□□□ -0.69
SF3B1-211ENST00000487698 INPP5BP32019 993 aa10.76□□□□□ -0.69
SF3B1-211ENST00000487698 MCM7P33993 719 aa10.76□□□□□ -0.69
SF3B1-211ENST00000487698 SYKP43405 635 aa10.76□□□□□ -0.69
SF3B1-211ENST00000487698 TYRO3Q06418 890 aa10.76□□□□□ -0.69
SF3B1-211ENST00000487698 ARL6IP4Q66PJ3 421 aaKnown RBP10.76□□□□□ -0.69
SF3B1-211ENST00000487698 CUL5Q93034 780 aa10.76□□□□□ -0.69
SF3B1-211ENST00000487698 L3MBTL3Q96JM7 780 aaPredicted RBP10.76□□□□□ -0.69
SF3B1-211ENST00000487698 TMEM260Q9NX78 707 aa10.76□□□□□ -0.69
SF3B1-211ENST00000487698 BIN2Q9UBW5 565 aaPredicted RBP10.76□□□□□ -0.69
SF3B1-211ENST00000487698 KCNH3Q9ULD8 1083 aa10.76□□□□□ -0.69
SF3B1-211ENST00000487698 PTPRFP10586 1907 aa10.76□□□□□ -0.69
SF3B1-211ENST00000487698 RLFQ13129 1914 aa10.76□□□□□ -0.69
SF3B1-211ENST00000487698 ORC2Q13416 577 aaPredicted RBP10.76□□□□□ -0.69
SF3B1-211ENST00000487698 SCYL3Q8IZE3 742 aa10.76□□□□□ -0.69
SF3B1-211ENST00000487698 AMNQ9BXJ7 453 aa10.76□□□□□ -0.69
SF3B1-211ENST00000487698 KIAA1683Q9H0B3 1180 aa10.76□□□□□ -0.69
SF3B1-211ENST00000487698 GLT8D2Q9H1C3 349 aa10.76□□□□□ -0.69
SF3B1-211ENST00000487698 PCDHA1Q9Y5I3 950 aa10.76□□□□□ -0.69
SF3B1-211ENST00000487698 ZC3H4Q9UPT8 1303 aaKnown RBP10.76□□□□□ -0.69
SF3B1-211ENST00000487698 RBBP6Q7Z6E9 1792 aaKnown RBP10.75□□□□□ -0.69
SF3B1-211ENST00000487698 IKQ13123 557 aaPredicted RBP10.75□□□□□ -0.69
SF3B1-211ENST00000487698 ZYXQ15942 572 aaKnown RBP10.75□□□□□ -0.69
SF3B1-211ENST00000487698 IL17AQ16552 155 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 SPECC1Q5M775 1068 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 JAKMIP3Q5VZ66 844 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 USP49Q70CQ1 688 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 NEK8Q86SG6 692 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 TBCKQ8TEA7 893 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 PSTPIP2Q9H939 334 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 FAM13BQ9NYF5 915 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 LAD1O00515 517 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 EDIL3O43854 480 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 PRPHP41219 470 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 MRPL12P52815 198 aaKnown RBP10.75□□□□□ -0.69
SF3B1-211ENST00000487698 SNAP25P60880 206 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 UBE2SQ16763 222 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 PRAMEF18Q5VWM3 479 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 FAM160B2Q86V87 743 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 FBXO11Q86XK2 927 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 ELOA2Q8IYF1 753 aaPredicted RBP10.75□□□□□ -0.69
SF3B1-211ENST00000487698 CHURC1Q8WUH1 139 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 LPAR1Q92633 364 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 FEZ1Q99689 392 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 TMEM60Q9H2L4 133 aa10.75□□□□□ -0.69
SF3B1-211ENST00000487698 RANBP17Q9H2T7 1088 aaKnown RBP10.75□□□□□ -0.69
SF3B1-211ENST00000487698 OPLAHO14841 1288 aa10.74□□□□□ -0.69
SF3B1-211ENST00000487698 WDR46O15213 610 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms