RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 SHISA4Q96DD7 197 aa7.17□□□□□ -1.26
COPS3-209ENST00000486810 KIRREL1Q96J84 757 aa7.17□□□□□ -1.26
COPS3-209ENST00000486810 ZDHHC15Q96MV8 337 aa7.17□□□□□ -1.26
COPS3-209ENST00000486810 FCRL3Q96P31 734 aaPredicted RBP7.17□□□□□ -1.26
COPS3-209ENST00000486810 KRTAP4-8Q9BYQ9 185 aa7.17□□□□□ -1.26
COPS3-209ENST00000486810 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.17□□□□□ -1.26
COPS3-209ENST00000486810 CGGBP1Q9UFW8 167 aaPredicted RBP7.17□□□□□ -1.26
COPS3-209ENST00000486810 SSU72P8A0A1W2PR75 194 aa7.16□□□□□ -1.26
COPS3-209ENST00000486810 ANKRD34BA5PLL1 514 aa7.16□□□□□ -1.26
COPS3-209ENST00000486810 VAMP4O75379 141 aa7.16□□□□□ -1.26
COPS3-209ENST00000486810 USP2O75604 605 aaPredicted RBP7.16□□□□□ -1.26
COPS3-209ENST00000486810 GJB6O95452 261 aa7.16□□□□□ -1.26
COPS3-209ENST00000486810 IFNGR1P15260 489 aa7.16□□□□□ -1.26
COPS3-209ENST00000486810 MCCP23508 829 aa7.16□□□□□ -1.26
COPS3-209ENST00000486810 IRX6P78412 446 aaPredicted RBP7.16□□□□□ -1.26
COPS3-209ENST00000486810 SETQ01105 290 aaPredicted RBP7.16□□□□□ -1.26
COPS3-209ENST00000486810 CALD1Q05682 793 aaKnown RBP7.16□□□□□ -1.26
COPS3-209ENST00000486810 NCAPHQ15003 741 aa7.16□□□□□ -1.26
COPS3-209ENST00000486810 NR0B2Q15466 257 aa7.16□□□□□ -1.26
COPS3-209ENST00000486810 MYLIPQ8WY64 445 aa7.16□□□□□ -1.26
COPS3-209ENST00000486810 DHX38Q92620 1227 aaKnown RBP7.16□□□□□ -1.26
COPS3-209ENST00000486810 RCC1LQ96I51 464 aaKnown RBP7.16□□□□□ -1.26
COPS3-209ENST00000486810 FMNL2Q96PY5 1086 aa7.16□□□□□ -1.26
COPS3-209ENST00000486810 ZMYM5Q9UJ78 669 aa7.16□□□□□ -1.26
COPS3-209ENST00000486810 DIS3Q9Y2L1 958 aaKnown RBP7.16□□□□□ -1.26
COPS3-209ENST00000486810 FADS2P1A8MWK0 482 aa7.15□□□□□ -1.26
COPS3-209ENST00000486810 PSPNO60542 156 aa7.15□□□□□ -1.26
COPS3-209ENST00000486810 GSTM1P09488 218 aa7.15□□□□□ -1.26
COPS3-209ENST00000486810 PTMSP20962 102 aa7.15□□□□□ -1.26
COPS3-209ENST00000486810 CANXP27824 592 aaKnown RBP7.15□□□□□ -1.26
COPS3-209ENST00000486810 GALK1P51570 392 aa7.15□□□□□ -1.26
COPS3-209ENST00000486810 DUSP4Q13115 394 aa7.15□□□□□ -1.26
COPS3-209ENST00000486810 KCNMB1Q16558 191 aa7.15□□□□□ -1.26
COPS3-209ENST00000486810 ADAT2Q7Z6V5 191 aaKnown RBP7.15□□□□□ -1.26
COPS3-209ENST00000486810 ANKS4BQ8N8V4 417 aa7.15□□□□□ -1.26
COPS3-209ENST00000486810 ABHD4Q8TB40 342 aa7.15□□□□□ -1.26
COPS3-209ENST00000486810 ASIC4Q96FT7 647 aa7.15□□□□□ -1.26
COPS3-209ENST00000486810 FCRL2Q96LA5 508 aaPredicted RBP7.15□□□□□ -1.26
COPS3-209ENST00000486810 CDADC1Q9BWV3 514 aa7.15□□□□□ -1.26
COPS3-209ENST00000486810 TANGO6Q9C0B7 1094 aa7.15□□□□□ -1.26
COPS3-209ENST00000486810 RNF32Q9H0A6 362 aa7.15□□□□□ -1.26
COPS3-209ENST00000486810 GBP3Q9H0R5 595 aa7.15□□□□□ -1.26
COPS3-209ENST00000486810 CENPJQ9HC77 1338 aaPredicted RBP7.15□□□□□ -1.26
COPS3-209ENST00000486810 FITM1A5D6W6 292 aa7.14□□□□□ -1.27
COPS3-209ENST00000486810 PPM1BO75688 479 aa7.14□□□□□ -1.27
COPS3-209ENST00000486810 DDAH1O94760 285 aa7.14□□□□□ -1.27
COPS3-209ENST00000486810 GLI1P08151 1106 aa7.14□□□□□ -1.27
COPS3-209ENST00000486810 KIR2DL1P43626 348 aaPredicted RBP7.14□□□□□ -1.27
COPS3-209ENST00000486810 KIR2DL2P43627 348 aaPredicted RBP7.14□□□□□ -1.27
COPS3-209ENST00000486810 KIR3DS1Q14943 382 aa7.14□□□□□ -1.27
COPS3-209ENST00000486810 FXNQ16595 210 aa7.14□□□□□ -1.27
COPS3-209ENST00000486810 LIN37Q96GY3 246 aaPredicted RBP7.14□□□□□ -1.27
COPS3-209ENST00000486810 CHMP4BQ9H444 224 aaKnown RBP7.14□□□□□ -1.27
COPS3-209ENST00000486810 ST7Q9NRC1 585 aa7.14□□□□□ -1.27
COPS3-209ENST00000486810 SF3B6Q9Y3B4 125 aaKnown RBP7.14□□□□□ -1.27
COPS3-209ENST00000486810 EMC9Q9Y3B6 208 aa7.14□□□□□ -1.27
COPS3-209ENST00000486810 FGF10O15520 208 aaPredicted RBP7.13□□□□□ -1.27
COPS3-209ENST00000486810 TBX1O43435 398 aa7.13□□□□□ -1.27
COPS3-209ENST00000486810 SUSD5O60279 629 aa7.13□□□□□ -1.27
COPS3-209ENST00000486810 PTMAP06454 111 aaKnown RBP7.13□□□□□ -1.27
COPS3-209ENST00000486810 CD3EP07766 207 aa7.13□□□□□ -1.27
COPS3-209ENST00000486810 RAC2P15153 192 aa7.13□□□□□ -1.27
COPS3-209ENST00000486810 ZNF143P52747 638 aaPredicted RBP7.13□□□□□ -1.27
COPS3-209ENST00000486810 CYP4F3Q08477 520 aa7.13□□□□□ -1.27
COPS3-209ENST00000486810 CNGB1Q14028 1251 aaPredicted RBP7.13□□□□□ -1.27
COPS3-209ENST00000486810 DDR2Q16832 855 aa7.13□□□□□ -1.27
COPS3-209ENST00000486810 CWF19L1Q69YN2 538 aaKnown RBP7.13□□□□□ -1.27
COPS3-209ENST00000486810 OXR1Q8N573 874 aa7.13□□□□□ -1.27
COPS3-209ENST00000486810 MRGPRX3Q96LB0 322 aa7.13□□□□□ -1.27
COPS3-209ENST00000486810 APBA2Q99767 749 aa7.13□□□□□ -1.27
COPS3-209ENST00000486810 PLCD4Q9BRC7 762 aa7.13□□□□□ -1.27
COPS3-209ENST00000486810 PRDM4Q9UKN5 801 aa7.13□□□□□ -1.27
COPS3-209ENST00000486810 GPR55Q9Y2T6 319 aaPredicted RBP7.13□□□□□ -1.27
COPS3-209ENST00000486810 RNF114Q9Y508 228 aa7.13□□□□□ -1.27
COPS3-209ENST00000486810 AURKAO14965 403 aa7.12□□□□□ -1.27
COPS3-209ENST00000486810 NRDCO43847 1150 aa7.12□□□□□ -1.27
COPS3-209ENST00000486810 POU4F1Q01851 419 aa7.12□□□□□ -1.27
COPS3-209ENST00000486810 CHRNEQ04844 493 aa7.12□□□□□ -1.27
COPS3-209ENST00000486810 RAB33AQ14088 237 aa7.12□□□□□ -1.27
COPS3-209ENST00000486810 DPY19L1Q2PZI1 675 aa7.12□□□□□ -1.27
COPS3-209ENST00000486810 TMEM67Q5HYA8 995 aa7.12□□□□□ -1.27
COPS3-209ENST00000486810 SLCO6A1Q86UG4 719 aa7.12□□□□□ -1.27
COPS3-209ENST00000486810 NLRX1Q86UT6 975 aa7.12□□□□□ -1.27
COPS3-209ENST00000486810 SPPL2CQ8IUH8 684 aa7.12□□□□□ -1.27
COPS3-209ENST00000486810 LILRA2Q8N149 483 aa7.12□□□□□ -1.27
COPS3-209ENST00000486810 PSMD1Q99460 953 aa7.12□□□□□ -1.27
COPS3-209ENST00000486810 AKT3Q9Y243 479 aa7.12□□□□□ -1.27
COPS3-209ENST00000486810 SUGT1Q9Y2Z0 365 aa7.12□□□□□ -1.27
COPS3-209ENST00000486810 MYO15BQ96JP2 1530 aa7.11□□□□□ -1.27
COPS3-209ENST00000486810 STXBP3O00186 592 aa7.11□□□□□ -1.27
COPS3-209ENST00000486810 CLGNO14967 610 aa7.11□□□□□ -1.27
COPS3-209ENST00000486810 PAX4O43316 350 aa7.11□□□□□ -1.27
COPS3-209ENST00000486810 STK10O94804 968 aaKnown RBP7.11□□□□□ -1.27
COPS3-209ENST00000486810 CAPNS1P04632 268 aa7.11□□□□□ -1.27
COPS3-209ENST00000486810 ATP2B1P20020 1258 aa7.11□□□□□ -1.27
COPS3-209ENST00000486810 MMP14P50281 582 aa7.11□□□□□ -1.27
COPS3-209ENST00000486810 GRB10Q13322 594 aa7.11□□□□□ -1.27
COPS3-209ENST00000486810 HSF5Q4G112 596 aaPredicted RBP7.11□□□□□ -1.27
COPS3-209ENST00000486810 CEP128Q6ZU80 1094 aa7.11□□□□□ -1.27
COPS3-209ENST00000486810 BVESQ8NE79 360 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms