RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 ZBTB5O15062 677 aa12.96□□□□□ -0.33
CLDN11-205ENST00000480067 PPFIA3O75145 1194 aa12.96□□□□□ -0.33
CLDN11-205ENST00000480067 TBC1D8O95759 1140 aa12.96□□□□□ -0.33
CLDN11-205ENST00000480067 SLC4A3P48751 1232 aa12.96□□□□□ -0.33
CLDN11-205ENST00000480067 SSRP1Q08945 709 aaKnown RBP12.96□□□□□ -0.33
CLDN11-205ENST00000480067 FUT2Q10981 343 aa12.96□□□□□ -0.33
CLDN11-205ENST00000480067 TMEM132BQ14DG7 1078 aa12.96□□□□□ -0.33
CLDN11-205ENST00000480067 CDC37Q16543 378 aaPredicted RBP12.96□□□□□ -0.33
CLDN11-205ENST00000480067 SLC35G1Q2M3R5 365 aa12.96□□□□□ -0.33
CLDN11-205ENST00000480067 SLC26A6Q9BXS9 759 aa12.96□□□□□ -0.33
CLDN11-205ENST00000480067 RAVER2Q9HCJ3 691 aaKnown RBP12.96□□□□□ -0.33
CLDN11-205ENST00000480067 CPA4Q9UI42 421 aa12.96□□□□□ -0.33
CLDN11-205ENST00000480067 PNMA2Q9UL42 364 aa12.96□□□□□ -0.33
CLDN11-205ENST00000480067 hCG_1642624A0A1W2PR95 340 aa12.95□□□□□ -0.34
CLDN11-205ENST00000480067 ICAM1P05362 532 aa12.95□□□□□ -0.34
CLDN11-205ENST00000480067 STAT3P40763 770 aa12.95□□□□□ -0.34
CLDN11-205ENST00000480067 OAZ1P54368 228 aa12.95□□□□□ -0.34
CLDN11-205ENST00000480067 CCNA1P78396 465 aa12.95□□□□□ -0.34
CLDN11-205ENST00000480067 TRAF1Q13077 416 aa12.95□□□□□ -0.34
CLDN11-205ENST00000480067 QRICH1Q2TAL8 776 aa12.95□□□□□ -0.34
CLDN11-205ENST00000480067 POTEEQ6S8J3 1075 aa12.95□□□□□ -0.34
CLDN11-205ENST00000480067 C17orf99Q6UX52 265 aa12.95□□□□□ -0.34
CLDN11-205ENST00000480067 CCAR1Q8IX12 1150 aaKnown RBP12.95□□□□□ -0.34
CLDN11-205ENST00000480067 MTMR8Q96EF0 704 aa12.95□□□□□ -0.34
CLDN11-205ENST00000480067 LLPHQ9BRT6 129 aaKnown RBP12.95□□□□□ -0.34
CLDN11-205ENST00000480067 TEX13BQ9BXU2 312 aa12.95□□□□□ -0.34
CLDN11-205ENST00000480067 SPATC1LQ9H0A9 340 aa12.95□□□□□ -0.34
CLDN11-205ENST00000480067 TXNRD2Q9NNW7 524 aa12.95□□□□□ -0.34
CLDN11-205ENST00000480067 SAGE1Q9NXZ1 904 aa12.95□□□□□ -0.34
CLDN11-205ENST00000480067 BTBD7Q9P203 1132 aa12.95□□□□□ -0.34
CLDN11-205ENST00000480067 RBM27Q9P2N5 1060 aaKnown RBP12.95□□□□□ -0.34
CLDN11-205ENST00000480067 CNTNAP5Q8WYK1 1306 aa12.95□□□□□ -0.34
CLDN11-205ENST00000480067 ATP2A1O14983 1001 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 PRPF3O43395 683 aaKnown RBP12.94□□□□□ -0.34
CLDN11-205ENST00000480067 PEX10O60683 326 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 FMNL1O95466 1100 aaPredicted RBP12.94□□□□□ -0.34
CLDN11-205ENST00000480067 CTDNEP1O95476 244 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 ERVK-9P63128 1117 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 ERVK-24P63145 666 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 BECN1Q14457 450 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 FAM110CQ1W6H9 321 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 Q3C1V9 767 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 SNRNP48Q6IEG0 339 aaKnown RBP12.94□□□□□ -0.34
CLDN11-205ENST00000480067 FBXO11Q86XK2 927 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 REPS2Q8NFH8 660 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 AGBL1Q96MI9 1066 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 AMNQ9BXJ7 453 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 CFHR5Q9BXR6 569 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 RNF26Q9BY78 433 aaPredicted RBP12.94□□□□□ -0.34
CLDN11-205ENST00000480067 WBP1LQ9NX94 342 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 MORF4L1Q9UBU8 362 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 ZNF214Q9UL59 606 aaPredicted RBP12.94□□□□□ -0.34
CLDN11-205ENST00000480067 CCPG1Q9ULG6 757 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 PTPDC1A2A3K4 754 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 CNMDO75829 334 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 HSP90AA1P07900 732 aaKnown RBP12.94□□□□□ -0.34
CLDN11-205ENST00000480067 BCRP11274 1271 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 ANP32AP39687 249 aaKnown RBP12.94□□□□□ -0.34
CLDN11-205ENST00000480067 ST3GAL1Q11201 340 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 USH1GQ495M9 461 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 NSUN7Q8NE18 718 aaKnown RBP12.94□□□□□ -0.34
CLDN11-205ENST00000480067 DDX11Q96FC9 970 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 R3HDMLQ9H3Y0 253 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.94□□□□□ -0.34
CLDN11-205ENST00000480067 PCDHA1Q9Y5I3 950 aa12.94□□□□□ -0.34
CLDN11-205ENST00000480067 ZNF536O15090 1300 aa12.93□□□□□ -0.34
CLDN11-205ENST00000480067 ADGRA2Q96PE1 1338 aa12.93□□□□□ -0.34
CLDN11-205ENST00000480067 JAK2O60674 1132 aa12.93□□□□□ -0.34
CLDN11-205ENST00000480067 DEXIO95424 95 aa12.93□□□□□ -0.34
CLDN11-205ENST00000480067 SLC25A27O95847 323 aa12.93□□□□□ -0.34
CLDN11-205ENST00000480067 ALAS1P13196 640 aa12.93□□□□□ -0.34
CLDN11-205ENST00000480067 CUL4AQ13619 759 aa12.93□□□□□ -0.34
CLDN11-205ENST00000480067 PFKFB3Q16875 520 aaPredicted RBP12.93□□□□□ -0.34
CLDN11-205ENST00000480067 HEATR3Q7Z4Q2 680 aa12.93□□□□□ -0.34
CLDN11-205ENST00000480067 NCAPG2Q86XI2 1143 aa12.93□□□□□ -0.34
CLDN11-205ENST00000480067 WASF1Q92558 559 aa12.93□□□□□ -0.34
CLDN11-205ENST00000480067 MOV10L1Q9BXT6 1211 aaKnown RBP12.93□□□□□ -0.34
CLDN11-205ENST00000480067 TSHZ2Q9NRE2 1034 aa12.93□□□□□ -0.34
CLDN11-205ENST00000480067 ORC3Q9UBD5 711 aaPredicted RBP12.93□□□□□ -0.34
CLDN11-205ENST00000480067 PPP1R11O60927 126 aaPredicted RBP12.92□□□□□ -0.34
CLDN11-205ENST00000480067 DTNBO60941 627 aa12.92□□□□□ -0.34
CLDN11-205ENST00000480067 SCG2P13521 617 aa12.92□□□□□ -0.34
CLDN11-205ENST00000480067 COPB2P35606 906 aa12.92□□□□□ -0.34
CLDN11-205ENST00000480067 HMGN5P82970 282 aaKnown RBP12.92□□□□□ -0.34
CLDN11-205ENST00000480067 WDR78Q5VTH9 848 aa12.92□□□□□ -0.34
CLDN11-205ENST00000480067 RIOX2Q8IUF8 465 aa12.92□□□□□ -0.34
CLDN11-205ENST00000480067 JMYQ8N9B5 988 aa12.92□□□□□ -0.34
CLDN11-205ENST00000480067 FAM184AQ8NB25 1140 aa12.92□□□□□ -0.34
CLDN11-205ENST00000480067 TRERF1Q96PN7 1200 aa12.92□□□□□ -0.34
CLDN11-205ENST00000480067 MROH8Q9H579 483 aa12.92□□□□□ -0.34
CLDN11-205ENST00000480067 CWC22Q9HCG8 908 aaKnown RBP12.92□□□□□ -0.34
CLDN11-205ENST00000480067 HOMER2Q9NSB8 354 aa12.92□□□□□ -0.34
CLDN11-205ENST00000480067 RIPK3Q9Y572 518 aa12.92□□□□□ -0.34
CLDN11-205ENST00000480067 STK36Q9NRP7 1315 aa12.92□□□□□ -0.34
CLDN11-205ENST00000480067 ERCC3P19447 782 aa12.91□□□□□ -0.34
CLDN11-205ENST00000480067 SP3Q02447 781 aa12.91□□□□□ -0.34
CLDN11-205ENST00000480067 PKN1Q16512 942 aa12.91□□□□□ -0.34
CLDN11-205ENST00000480067 TKFCQ3LXA3 575 aa12.91□□□□□ -0.34
CLDN11-205ENST00000480067 SMARCC2Q8TAQ2 1214 aa12.91□□□□□ -0.34
CLDN11-205ENST00000480067 COA7Q96BR5 231 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms