RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 TANGO6Q9C0B7 1094 aa10.13□□□□□ -0.79
SMC5-203ENST00000475540 GPR160Q9UJ42 338 aa10.13□□□□□ -0.79
SMC5-203ENST00000475540 USP2O75604 605 aaPredicted RBP10.12□□□□□ -0.79
SMC5-203ENST00000475540 CD3EP07766 207 aa10.12□□□□□ -0.79
SMC5-203ENST00000475540 ATP2B1P20020 1258 aa10.12□□□□□ -0.79
SMC5-203ENST00000475540 RTP1P59025 263 aa10.12□□□□□ -0.79
SMC5-203ENST00000475540 NAT16Q8N8M0 369 aa10.12□□□□□ -0.79
SMC5-203ENST00000475540 LIN37Q96GY3 246 aaPredicted RBP10.12□□□□□ -0.79
SMC5-203ENST00000475540 CWC22Q9HCG8 908 aaKnown RBP10.12□□□□□ -0.79
SMC5-203ENST00000475540 AKT3Q9Y243 479 aa10.12□□□□□ -0.79
SMC5-203ENST00000475540 VAMP4O75379 141 aa10.11□□□□□ -0.79
SMC5-203ENST00000475540 STK10O94804 968 aaKnown RBP10.11□□□□□ -0.79
SMC5-203ENST00000475540 HNRNPLLQ8WVV9 542 aaKnown RBP10.11□□□□□ -0.79
SMC5-203ENST00000475540 PPP1R14AQ96A00 147 aa10.11□□□□□ -0.79
SMC5-203ENST00000475540 RNF32Q9H0A6 362 aa10.11□□□□□ -0.79
SMC5-203ENST00000475540 ERVK13-1Q9NX77 482 aa10.11□□□□□ -0.79
SMC5-203ENST00000475540 PPP1R1BQ9UD71 204 aaPredicted RBP10.11□□□□□ -0.79
SMC5-203ENST00000475540 CGGBP1Q9UFW8 167 aaPredicted RBP10.11□□□□□ -0.79
SMC5-203ENST00000475540 LRRC10BA6NIK2 292 aa10.1□□□□□ -0.79
SMC5-203ENST00000475540 FADS2P1A8MWK0 482 aa10.1□□□□□ -0.79
SMC5-203ENST00000475540 NOP56O00567 594 aaKnown RBP10.1□□□□□ -0.79
SMC5-203ENST00000475540 PSPNO60542 156 aa10.1□□□□□ -0.79
SMC5-203ENST00000475540 AMPD2Q01433 879 aa10.1□□□□□ -0.79
SMC5-203ENST00000475540 TIGD5Q53EQ6 642 aa10.1□□□□□ -0.79
SMC5-203ENST00000475540 POMZP3Q6PJE2 187 aa10.1□□□□□ -0.79
SMC5-203ENST00000475540 CRACR2BQ8N4Y2 399 aaPredicted RBP10.1□□□□□ -0.79
SMC5-203ENST00000475540 BVESQ8NE79 360 aa10.1□□□□□ -0.79
SMC5-203ENST00000475540 NRDCO43847 1150 aa10.09□□□□□ -0.79
SMC5-203ENST00000475540 GRB10Q13322 594 aa10.09□□□□□ -0.79
SMC5-203ENST00000475540 MLANAQ16655 118 aa10.09□□□□□ -0.79
SMC5-203ENST00000475540 DPY19L1Q2PZI1 675 aa10.09□□□□□ -0.79
SMC5-203ENST00000475540 HLA-DQA1Q5Y7H0 255 aa10.09□□□□□ -0.79
SMC5-203ENST00000475540 MICAL1Q8TDZ2 1067 aa10.09□□□□□ -0.79
SMC5-203ENST00000475540 APEX2Q9UBZ4 518 aa10.09□□□□□ -0.79
SMC5-203ENST00000475540 A0A1W2PQ45 241 aaPredicted RBP10.08□□□□□ -0.8
SMC5-203ENST00000475540 A0A1W2PQY0 241 aa10.08□□□□□ -0.8
SMC5-203ENST00000475540 WTIPA6NIX2 430 aaPredicted RBP10.08□□□□□ -0.8
SMC5-203ENST00000475540 B2RBV5 119 aa10.08□□□□□ -0.8
SMC5-203ENST00000475540 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.08□□□□□ -0.8
SMC5-203ENST00000475540 IFNGR1P15260 489 aa10.08□□□□□ -0.8
SMC5-203ENST00000475540 SV2CQ496J9 727 aa10.08□□□□□ -0.8
SMC5-203ENST00000475540 GALNT18Q6P9A2 607 aa10.08□□□□□ -0.8
SMC5-203ENST00000475540 ZNF513Q8N8E2 541 aaPredicted RBP10.08□□□□□ -0.8
SMC5-203ENST00000475540 ST7Q9NRC1 585 aa10.08□□□□□ -0.8
SMC5-203ENST00000475540 GPR55Q9Y2T6 319 aaPredicted RBP10.08□□□□□ -0.8
SMC5-203ENST00000475540 NOTOA8MTQ0 251 aa10.07□□□□□ -0.8
SMC5-203ENST00000475540 FGF10O15520 208 aaPredicted RBP10.07□□□□□ -0.8
SMC5-203ENST00000475540 KLF4O43474 513 aa10.07□□□□□ -0.8
SMC5-203ENST00000475540 GJB6O95452 261 aa10.07□□□□□ -0.8
SMC5-203ENST00000475540 TBC1D8O95759 1140 aa10.07□□□□□ -0.8
SMC5-203ENST00000475540 OGFOD2Q6N063 350 aa10.07□□□□□ -0.8
SMC5-203ENST00000475540 CYP2R1Q6VVX0 501 aa10.07□□□□□ -0.8
SMC5-203ENST00000475540 NPM2Q86SE8 214 aaKnown RBP10.07□□□□□ -0.8
SMC5-203ENST00000475540 SIRT2Q8IXJ6 389 aa10.07□□□□□ -0.8
SMC5-203ENST00000475540 CKAP2LQ8IYA6 745 aa10.07□□□□□ -0.8
SMC5-203ENST00000475540 TMEM52Q8NDY8 209 aa10.07□□□□□ -0.8
SMC5-203ENST00000475540 SLC6A17Q9H1V8 727 aa10.07□□□□□ -0.8
SMC5-203ENST00000475540 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.07□□□□□ -0.8
SMC5-203ENST00000475540 LRP2BPQ9P2M1 347 aa10.07□□□□□ -0.8
SMC5-203ENST00000475540 YBX2Q9Y2T7 364 aaKnown RBP10.07□□□□□ -0.8
SMC5-203ENST00000475540 EMC9Q9Y3B6 208 aa10.07□□□□□ -0.8
SMC5-203ENST00000475540 AURKAO14965 403 aa10.06□□□□□ -0.8
SMC5-203ENST00000475540 SUSD5O60279 629 aa10.06□□□□□ -0.8
SMC5-203ENST00000475540 KCNH1O95259 989 aa10.06□□□□□ -0.8
SMC5-203ENST00000475540 EEF1DP3Q658K8 133 aa10.06□□□□□ -0.8
SMC5-203ENST00000475540 PRR23BQ6ZRT6 265 aa10.06□□□□□ -0.8
SMC5-203ENST00000475540 EEPD1Q7L9B9 569 aa10.06□□□□□ -0.8
SMC5-203ENST00000475540 NLRX1Q86UT6 975 aa10.06□□□□□ -0.8
SMC5-203ENST00000475540 JAMLQ86YT9 394 aa10.06□□□□□ -0.8
SMC5-203ENST00000475540 PTCHD1Q96NR3 888 aa10.06□□□□□ -0.8
SMC5-203ENST00000475540 TRIM55Q9BYV6 548 aa10.06□□□□□ -0.8
SMC5-203ENST00000475540 TAF6LQ9Y6J9 622 aa10.06□□□□□ -0.8
SMC5-203ENST00000475540 A0A1W2PQ27 194 aa10.05□□□□□ -0.8
SMC5-203ENST00000475540 A0A1W2PQ64 194 aa10.05□□□□□ -0.8
SMC5-203ENST00000475540 A0A1W2PQC6 194 aa10.05□□□□□ -0.8
SMC5-203ENST00000475540 A0A1W2PQD8 194 aa10.05□□□□□ -0.8
SMC5-203ENST00000475540 C2orf71A6NGG8 1288 aa10.05□□□□□ -0.8
SMC5-203ENST00000475540 STXBP3O00186 592 aa10.05□□□□□ -0.8
SMC5-203ENST00000475540 FARP2O94887 1054 aaPredicted RBP10.05□□□□□ -0.8
SMC5-203ENST00000475540 SEPHS1P49903 392 aa10.05□□□□□ -0.8
SMC5-203ENST00000475540 HSF5Q4G112 596 aaPredicted RBP10.05□□□□□ -0.8
SMC5-203ENST00000475540 RCSD1Q6JBY9 416 aa10.05□□□□□ -0.8
SMC5-203ENST00000475540 SLCO6A1Q86UG4 719 aa10.05□□□□□ -0.8
SMC5-203ENST00000475540 CELF2-AS1Q8N7Q2 184 aa10.05□□□□□ -0.8
SMC5-203ENST00000475540 SHISA4Q96DD7 197 aa10.05□□□□□ -0.8
SMC5-203ENST00000475540 CRTAC1Q9NQ79 661 aa10.05□□□□□ -0.8
SMC5-203ENST00000475540 BACE2Q9Y5Z0 518 aa10.05□□□□□ -0.8
SMC5-203ENST00000475540 GTF2F1P35269 517 aaKnown RBP eCLIP10.04□□□□□ -0.8
SMC5-203ENST00000475540 GALK1P51570 392 aa10.04□□□□□ -0.8
SMC5-203ENST00000475540 RAB33AQ14088 237 aa10.04□□□□□ -0.8
SMC5-203ENST00000475540 DDR2Q16832 855 aa10.04□□□□□ -0.8
SMC5-203ENST00000475540 POU5F2Q8N7G0 328 aa10.04□□□□□ -0.8
SMC5-203ENST00000475540 INTS4Q96HW7 963 aaKnown RBP10.04□□□□□ -0.8
SMC5-203ENST00000475540 DIRC2Q96SL1 478 aa10.04□□□□□ -0.8
SMC5-203ENST00000475540 MCMBPQ9BTE3 642 aa10.04□□□□□ -0.8
SMC5-203ENST00000475540 NSUN3Q9H649 340 aaKnown RBP10.04□□□□□ -0.8
SMC5-203ENST00000475540 U2SURPO15042 1029 aaKnown RBP10.03□□□□□ -0.8
SMC5-203ENST00000475540 PDE6BP35913 854 aa10.03□□□□□ -0.8
SMC5-203ENST00000475540 MRM1Q6IN84 353 aaKnown RBP10.03□□□□□ -0.8
SMC5-203ENST00000475540 KSR1Q8IVT5 923 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms