RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 TCEAL1Q15170 157 aa7.65□□□□□ -1.18
LTN1-204ENST00000475344 HSF5Q4G112 596 aaPredicted RBP7.65□□□□□ -1.18
LTN1-204ENST00000475344 ANKRD39Q53RE8 183 aa7.65□□□□□ -1.18
LTN1-204ENST00000475344 RTP2Q5QGT7 225 aa7.65□□□□□ -1.18
LTN1-204ENST00000475344 GALNT18Q6P9A2 607 aa7.65□□□□□ -1.18
LTN1-204ENST00000475344 ADAT2Q7Z6V5 191 aaKnown RBP7.65□□□□□ -1.18
LTN1-204ENST00000475344 OR6P1Q8NGX9 317 aa7.65□□□□□ -1.18
LTN1-204ENST00000475344 SLC12A9Q9BXP2 914 aa7.65□□□□□ -1.18
LTN1-204ENST00000475344 FHOD1Q9Y613 1164 aa7.65□□□□□ -1.18
LTN1-204ENST00000475344 A0A1W2PQH9 124 aa7.64□□□□□ -1.19
LTN1-204ENST00000475344 WTIPA6NIX2 430 aaPredicted RBP7.64□□□□□ -1.19
LTN1-204ENST00000475344 CD3EP07766 207 aa7.64□□□□□ -1.19
LTN1-204ENST00000475344 PRKCAP17252 672 aa7.64□□□□□ -1.19
LTN1-204ENST00000475344 CFPP27918 469 aa7.64□□□□□ -1.19
LTN1-204ENST00000475344 SLC7A5Q01650 507 aa7.64□□□□□ -1.19
LTN1-204ENST00000475344 HEATR6Q6AI08 1181 aaKnown RBP7.64□□□□□ -1.19
LTN1-204ENST00000475344 NUP43Q8NFH3 380 aa7.64□□□□□ -1.19
LTN1-204ENST00000475344 ANAPC16Q96DE5 110 aa7.64□□□□□ -1.19
LTN1-204ENST00000475344 FGD4Q96M96 766 aa7.64□□□□□ -1.19
LTN1-204ENST00000475344 HAUS7Q99871 368 aa7.64□□□□□ -1.19
LTN1-204ENST00000475344 SGPP1Q9BX95 441 aa7.64□□□□□ -1.19
LTN1-204ENST00000475344 ZNF552Q9H707 407 aaPredicted RBP7.64□□□□□ -1.19
LTN1-204ENST00000475344 SF3B6Q9Y3B4 125 aaKnown RBP7.64□□□□□ -1.19
LTN1-204ENST00000475344 ARID1BQ8NFD5 2236 aaPredicted RBP7.63□□□□□ -1.19
LTN1-204ENST00000475344 MYOCOSA0A1B0GUC4 107 aa7.63□□□□□ -1.19
LTN1-204ENST00000475344 A0A1W2PQ27 194 aa7.63□□□□□ -1.19
LTN1-204ENST00000475344 A0A1W2PQ64 194 aa7.63□□□□□ -1.19
LTN1-204ENST00000475344 A0A1W2PQC6 194 aa7.63□□□□□ -1.19
LTN1-204ENST00000475344 A0A1W2PQD8 194 aa7.63□□□□□ -1.19
LTN1-204ENST00000475344 CBFA2T2O43439 604 aa7.63□□□□□ -1.19
LTN1-204ENST00000475344 ERCC5P28715 1186 aaPredicted RBP7.63□□□□□ -1.19
LTN1-204ENST00000475344 NOP2P46087 812 aaKnown RBP7.63□□□□□ -1.19
LTN1-204ENST00000475344 KCNA10Q16322 511 aa7.63□□□□□ -1.19
LTN1-204ENST00000475344 LRRC56Q8IYG6 542 aaPredicted RBP7.63□□□□□ -1.19
LTN1-204ENST00000475344 ZSCAN18Q8TBC5 510 aaPredicted RBP7.63□□□□□ -1.19
LTN1-204ENST00000475344 ZNF428Q96B54 188 aa7.63□□□□□ -1.19
LTN1-204ENST00000475344 SHDQ96IW2 340 aa7.63□□□□□ -1.19
LTN1-204ENST00000475344 PHAXQ9H814 394 aaKnown RBP7.63□□□□□ -1.19
LTN1-204ENST00000475344 CRTAC1Q9NQ79 661 aa7.63□□□□□ -1.19
LTN1-204ENST00000475344 IFNGR1P15260 489 aa7.62□□□□□ -1.19
LTN1-204ENST00000475344 PNLIPP16233 465 aa7.62□□□□□ -1.19
LTN1-204ENST00000475344 GLDCP23378 1020 aa7.62□□□□□ -1.19
LTN1-204ENST00000475344 ARL4AP40617 200 aa7.62□□□□□ -1.19
LTN1-204ENST00000475344 SRSF3P84103 164 aaKnown RBP7.62□□□□□ -1.19
LTN1-204ENST00000475344 CYP4F8P98187 520 aa7.62□□□□□ -1.19
LTN1-204ENST00000475344 POU4F1Q01851 419 aa7.62□□□□□ -1.19
LTN1-204ENST00000475344 SLCO6A1Q86UG4 719 aa7.62□□□□□ -1.19
LTN1-204ENST00000475344 JAMLQ86YT9 394 aa7.62□□□□□ -1.19
LTN1-204ENST00000475344 SEC16BQ96JE7 1060 aa7.62□□□□□ -1.19
LTN1-204ENST00000475344 JMJD8Q96S16 334 aa7.62□□□□□ -1.19
LTN1-204ENST00000475344 GBP3Q9H0R5 595 aa7.62□□□□□ -1.19
LTN1-204ENST00000475344 IMPACTQ9P2X3 320 aa7.62□□□□□ -1.19
LTN1-204ENST00000475344 SMG5Q9UPR3 1016 aaKnown RBP7.62□□□□□ -1.19
LTN1-204ENST00000475344 SUGT1Q9Y2Z0 365 aa7.62□□□□□ -1.19
LTN1-204ENST00000475344 EPHX1P07099 455 aa7.61□□□□□ -1.19
LTN1-204ENST00000475344 DPY19L1Q2PZI1 675 aa7.61□□□□□ -1.19
LTN1-204ENST00000475344 C19orf47Q8N9M1 422 aaKnown RBP7.61□□□□□ -1.19
LTN1-204ENST00000475344 TMEM52Q8NDY8 209 aa7.61□□□□□ -1.19
LTN1-204ENST00000475344 FCRL3Q96P31 734 aaPredicted RBP7.61□□□□□ -1.19
LTN1-204ENST00000475344 SIRT5Q9NXA8 310 aa7.61□□□□□ -1.19
LTN1-204ENST00000475344 WHRNQ9P202 907 aa7.61□□□□□ -1.19
LTN1-204ENST00000475344 A0A1W2PQ45 241 aaPredicted RBP7.6□□□□□ -1.19
LTN1-204ENST00000475344 A0A1W2PQY0 241 aa7.6□□□□□ -1.19
LTN1-204ENST00000475344 NUDT19A8MXV4 375 aa7.6□□□□□ -1.19
LTN1-204ENST00000475344 PEX10O60683 326 aa7.6□□□□□ -1.19
LTN1-204ENST00000475344 SEMA7AO75326 666 aa7.6□□□□□ -1.19
LTN1-204ENST00000475344 VAMP4O75379 141 aa7.6□□□□□ -1.19
LTN1-204ENST00000475344 PPM1BO75688 479 aa7.6□□□□□ -1.19
LTN1-204ENST00000475344 MED14OSP0DP75 135 aa7.6□□□□□ -1.19
LTN1-204ENST00000475344 DLG4P78352 724 aa7.6□□□□□ -1.19
LTN1-204ENST00000475344 HLA-DQA1Q5Y7H0 255 aa7.6□□□□□ -1.19
LTN1-204ENST00000475344 CIAPIN1Q6FI81 312 aa7.6□□□□□ -1.19
LTN1-204ENST00000475344 KIAA1211LQ6NV74 962 aa7.6□□□□□ -1.19
LTN1-204ENST00000475344 FAM169BQ8N8A8 192 aa7.6□□□□□ -1.19
LTN1-204ENST00000475344 CAPN10Q9HC96 672 aa7.6□□□□□ -1.19
LTN1-204ENST00000475344 CD320Q9NPF0 282 aa7.6□□□□□ -1.19
LTN1-204ENST00000475344 MRVI1Q9Y6F6 885 aa7.6□□□□□ -1.19
LTN1-204ENST00000475344 TEX51A0A1B0GUA7 166 aa7.59□□□□□ -1.19
LTN1-204ENST00000475344 STXBP3O00186 592 aa7.59□□□□□ -1.19
LTN1-204ENST00000475344 NUAK1O60285 661 aa7.59□□□□□ -1.19
LTN1-204ENST00000475344 MPOP05164 745 aa7.59□□□□□ -1.19
LTN1-204ENST00000475344 LINC00310P59036 64 aa7.59□□□□□ -1.19
LTN1-204ENST00000475344 RAB3GAP1Q15042 981 aa7.59□□□□□ -1.19
LTN1-204ENST00000475344 VHLLQ6RSH7 139 aa7.59□□□□□ -1.19
LTN1-204ENST00000475344 CILP2Q8IUL8 1156 aa7.59□□□□□ -1.19
LTN1-204ENST00000475344 KLHL6Q8WZ60 621 aa7.59□□□□□ -1.19
LTN1-204ENST00000475344 KLHL25Q9H0H3 589 aa7.59□□□□□ -1.19
LTN1-204ENST00000475344 DIS3Q9Y2L1 958 aaKnown RBP7.59□□□□□ -1.19
LTN1-204ENST00000475344 A0A1W2PQJ5 194 aa7.58□□□□□ -1.2
LTN1-204ENST00000475344 FGF10O15520 208 aaPredicted RBP7.58□□□□□ -1.2
LTN1-204ENST00000475344 VIPR1P32241 457 aa7.58□□□□□ -1.2
LTN1-204ENST00000475344 CEBPAP49715 358 aaPredicted RBP7.58□□□□□ -1.2
LTN1-204ENST00000475344 LAPTM5Q13571 262 aa7.58□□□□□ -1.2
LTN1-204ENST00000475344 CYP2R1Q6VVX0 501 aa7.58□□□□□ -1.2
LTN1-204ENST00000475344 PPP1R14AQ96A00 147 aa7.58□□□□□ -1.2
LTN1-204ENST00000475344 STRIP2Q9ULQ0 834 aa7.58□□□□□ -1.2
LTN1-204ENST00000475344 A0A087WZG4 1122 aa7.57□□□□□ -1.2
LTN1-204ENST00000475344 TBC1D8O95759 1140 aa7.57□□□□□ -1.2
LTN1-204ENST00000475344 SSBP05455 408 aaKnown RBP eCLIP7.57□□□□□ -1.2
LTN1-204ENST00000475344 ZSCAN22P10073 491 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms