RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 ENDOUP21128 410 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 AFF3P51826 1226 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 NCAPHQ15003 741 aa5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 VMACQ2NL98 169 aa5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 SPATS1Q496A3 300 aa5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 NBPF12Q5TAG4 269 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 SOGA3Q5TF21 947 aa5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 LILRA2Q8N149 483 aa5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 DTWD2Q8NBA8 298 aa5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 SREK1Q8WXA9 508 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 ANAPC16Q96DE5 110 aa5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 HIRIP3Q9BW71 556 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 TANGO6Q9C0B7 1094 aa5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 MKRN2Q9H000 416 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 ANTXR1Q9H6X2 564 aa5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 ZNF552Q9H707 407 aaPredicted RBP5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 CWC22Q9HCG8 908 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 ACTR10Q9NZ32 417 aa5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 YBX2Q9Y2T7 364 aaKnown RBP5.17□□□□□ -1.58
ECHDC1-213ENST00000474240 ACRP10323 421 aa5.16□□□□□ -1.58
ECHDC1-213ENST00000474240 GALK1P51570 392 aa5.16□□□□□ -1.58
ECHDC1-213ENST00000474240 ZNF143P52747 638 aaPredicted RBP5.16□□□□□ -1.58
ECHDC1-213ENST00000474240 EFEMP1Q12805 493 aa5.16□□□□□ -1.58
ECHDC1-213ENST00000474240 ANKRD39Q53RE8 183 aa5.16□□□□□ -1.58
ECHDC1-213ENST00000474240 UNC5AQ6ZN44 842 aa5.16□□□□□ -1.58
ECHDC1-213ENST00000474240 CKAP2LQ8IYA6 745 aa5.16□□□□□ -1.58
ECHDC1-213ENST00000474240 DACT3Q96B18 629 aaPredicted RBP5.16□□□□□ -1.58
ECHDC1-213ENST00000474240 VWCEQ96DN2 955 aa5.16□□□□□ -1.58
ECHDC1-213ENST00000474240 BDH2Q9BUT1 245 aa5.16□□□□□ -1.58
ECHDC1-213ENST00000474240 ZNF214Q9UL59 606 aaPredicted RBP5.16□□□□□ -1.58
ECHDC1-213ENST00000474240 PCDHB12Q9Y5F1 795 aa5.16□□□□□ -1.58
ECHDC1-213ENST00000474240 IRAK3Q9Y616 596 aa5.16□□□□□ -1.58
ECHDC1-213ENST00000474240 A0A1W2PQH9 124 aa5.15□□□□□ -1.59
ECHDC1-213ENST00000474240 FITM1A5D6W6 292 aa5.15□□□□□ -1.59
ECHDC1-213ENST00000474240 POLR2BP30876 1174 aaKnown RBP5.15□□□□□ -1.59
ECHDC1-213ENST00000474240 SLC7A5Q01650 507 aa5.15□□□□□ -1.59
ECHDC1-213ENST00000474240 TCEAL1Q15170 157 aa5.15□□□□□ -1.59
ECHDC1-213ENST00000474240 PPP2R5EQ16537 467 aa5.15□□□□□ -1.59
ECHDC1-213ENST00000474240 FXNQ16595 210 aa5.15□□□□□ -1.59
ECHDC1-213ENST00000474240 CLEC16AQ2KHT3 1053 aa5.15□□□□□ -1.59
ECHDC1-213ENST00000474240 SP8Q8IXZ3 490 aa5.15□□□□□ -1.59
ECHDC1-213ENST00000474240 CCDC144CPQ8IYA2 1237 aa5.15□□□□□ -1.59
ECHDC1-213ENST00000474240 OXR1Q8N573 874 aa5.15□□□□□ -1.59
ECHDC1-213ENST00000474240 SYTL4Q96C24 671 aaPredicted RBP5.15□□□□□ -1.59
ECHDC1-213ENST00000474240 SIGLEC10Q96LC7 697 aa5.15□□□□□ -1.59
ECHDC1-213ENST00000474240 GBP3Q9H0R5 595 aa5.15□□□□□ -1.59
ECHDC1-213ENST00000474240 ZNF408Q9H9D4 720 aa5.15□□□□□ -1.59
ECHDC1-213ENST00000474240 GPR160Q9UJ42 338 aa5.15□□□□□ -1.59
ECHDC1-213ENST00000474240 TPP2P29144 1249 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-213ENST00000474240 EPHB3P54753 998 aa5.14□□□□□ -1.59
ECHDC1-213ENST00000474240 EGR3Q06889 387 aa5.14□□□□□ -1.59
ECHDC1-213ENST00000474240 NMIQ13287 307 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-213ENST00000474240 NBPF9Q3BBW0 867 aa5.14□□□□□ -1.59
ECHDC1-213ENST00000474240 TMEM192Q8IY95 271 aa5.14□□□□□ -1.59
ECHDC1-213ENST00000474240 C7orf61Q8IZ16 206 aa5.14□□□□□ -1.59
ECHDC1-213ENST00000474240 CRACR2BQ8N4Y2 399 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-213ENST00000474240 DAGLBQ8NCG7 672 aa5.14□□□□□ -1.59
ECHDC1-213ENST00000474240 SYTL5Q8TDW5 730 aaPredicted RBP5.14□□□□□ -1.59
ECHDC1-213ENST00000474240 Q96M66 194 aa5.14□□□□□ -1.59
ECHDC1-213ENST00000474240 TEPSINQ96N21 525 aa5.14□□□□□ -1.59
ECHDC1-213ENST00000474240 DUSP13Q9UII6 198 aa5.14□□□□□ -1.59
ECHDC1-213ENST00000474240 A0A087WZG4 1122 aa5.13□□□□□ -1.59
ECHDC1-213ENST00000474240 U2SURPO15042 1029 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-213ENST00000474240 SMAD7O15105 426 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-213ENST00000474240 SIGLEC6O43699 453 aa5.13□□□□□ -1.59
ECHDC1-213ENST00000474240 AKAP8O43823 692 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-213ENST00000474240 ITGA4P13612 1032 aa5.13□□□□□ -1.59
ECHDC1-213ENST00000474240 PLP2Q04941 152 aa5.13□□□□□ -1.59
ECHDC1-213ENST00000474240 AUHQ13825 339 aaKnown RBP5.13□□□□□ -1.59
ECHDC1-213ENST00000474240 GAB4Q2WGN9 574 aa5.13□□□□□ -1.59
ECHDC1-213ENST00000474240 GNPTABQ3T906 1256 aa5.13□□□□□ -1.59
ECHDC1-213ENST00000474240 VHLLQ6RSH7 139 aa5.13□□□□□ -1.59
ECHDC1-213ENST00000474240 RUFY4Q6ZNE9 571 aa5.13□□□□□ -1.59
ECHDC1-213ENST00000474240 TSPYL5Q86VY4 417 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-213ENST00000474240 ZNF655Q8N720 491 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-213ENST00000474240 TRIM55Q9BYV6 548 aa5.13□□□□□ -1.59
ECHDC1-213ENST00000474240 EPN3Q9H201 632 aa5.13□□□□□ -1.59
ECHDC1-213ENST00000474240 MBD1Q9UIS9 605 aaPredicted RBP5.13□□□□□ -1.59
ECHDC1-213ENST00000474240 ZC3H12DA2A288 527 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-213ENST00000474240 NR0B2Q15466 257 aa5.12□□□□□ -1.59
ECHDC1-213ENST00000474240 HEATR6Q6AI08 1181 aaKnown RBP5.12□□□□□ -1.59
ECHDC1-213ENST00000474240 RNF111Q6ZNA4 994 aa5.12□□□□□ -1.59
ECHDC1-213ENST00000474240 FAM169BQ8N8A8 192 aa5.12□□□□□ -1.59
ECHDC1-213ENST00000474240 DRC1Q96MC2 740 aa5.12□□□□□ -1.59
ECHDC1-213ENST00000474240 DUSP15Q9H1R2 295 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-213ENST00000474240 EPB41L4AQ9HCS5 686 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-213ENST00000474240 WHRNQ9P202 907 aa5.12□□□□□ -1.59
ECHDC1-213ENST00000474240 PPP1R1BQ9UD71 204 aaPredicted RBP5.12□□□□□ -1.59
ECHDC1-213ENST00000474240 FBXL21Q9UKT6 434 aa5.12□□□□□ -1.59
ECHDC1-213ENST00000474240 FHOD1Q9Y613 1164 aa5.12□□□□□ -1.59
ECHDC1-213ENST00000474240 MRVI1Q9Y6F6 885 aa5.12□□□□□ -1.59
ECHDC1-213ENST00000474240 ANKRD34BA5PLL1 514 aa5.11□□□□□ -1.59
ECHDC1-213ENST00000474240 PPM1BO75688 479 aa5.11□□□□□ -1.59
ECHDC1-213ENST00000474240 GSNP06396 782 aa5.11□□□□□ -1.59
ECHDC1-213ENST00000474240 LTKP29376 864 aa5.11□□□□□ -1.59
ECHDC1-213ENST00000474240 ETFBP38117 255 aa5.11□□□□□ -1.59
ECHDC1-213ENST00000474240 PCBP3P57721 371 aaKnown RBP5.11□□□□□ -1.59
ECHDC1-213ENST00000474240 ZYXQ15942 572 aaKnown RBP5.11□□□□□ -1.59
ECHDC1-213ENST00000474240 NOL9Q5SY16 702 aaKnown RBP5.11□□□□□ -1.59
ECHDC1-213ENST00000474240 ADGRF1Q5T601 910 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms