RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 DSCC1Q9BVC3 393 aa6.63□□□□□ -1.35
RBM39-228ENST00000471635 SGPP1Q9BX95 441 aa6.63□□□□□ -1.35
RBM39-228ENST00000471635 PPT2Q9UMR5 302 aa6.63□□□□□ -1.35
RBM39-228ENST00000471635 GPR55Q9Y2T6 319 aaPredicted RBP6.63□□□□□ -1.35
RBM39-228ENST00000471635 RECKO95980 971 aa6.62□□□□□ -1.35
RBM39-228ENST00000471635 SDHBP21912 280 aa6.62□□□□□ -1.35
RBM39-228ENST00000471635 PPFIBP1Q86W92 1011 aa6.62□□□□□ -1.35
RBM39-228ENST00000471635 C7orf61Q8IZ16 206 aa6.62□□□□□ -1.35
RBM39-228ENST00000471635 PLCD4Q9BRC7 762 aa6.62□□□□□ -1.35
RBM39-228ENST00000471635 FAM86C1Q9NVL1 165 aa6.62□□□□□ -1.35
RBM39-228ENST00000471635 FADS2P1A8MWK0 482 aa6.61□□□□□ -1.35
RBM39-228ENST00000471635 SHOXO15266 292 aa6.61□□□□□ -1.35
RBM39-228ENST00000471635 ZNF205O95201 554 aa6.61□□□□□ -1.35
RBM39-228ENST00000471635 BMP8BP34820 402 aa6.61□□□□□ -1.35
RBM39-228ENST00000471635 PMS1P54277 932 aaKnown RBP6.61□□□□□ -1.35
RBM39-228ENST00000471635 KIR3DS1Q14943 382 aa6.61□□□□□ -1.35
RBM39-228ENST00000471635 HSF5Q4G112 596 aaPredicted RBP6.61□□□□□ -1.35
RBM39-228ENST00000471635 DCAF15Q66K64 600 aa6.61□□□□□ -1.35
RBM39-228ENST00000471635 RUFY4Q6ZNE9 571 aa6.61□□□□□ -1.35
RBM39-228ENST00000471635 CRTAC1Q9NQ79 661 aa6.61□□□□□ -1.35
RBM39-228ENST00000471635 AP5S1Q9NUS5 200 aa6.61□□□□□ -1.35
RBM39-228ENST00000471635 ERVK13-1Q9NX77 482 aa6.61□□□□□ -1.35
RBM39-228ENST00000471635 TNFRSF10DQ9UBN6 386 aa6.61□□□□□ -1.35
RBM39-228ENST00000471635 DDX41Q9UJV9 622 aaKnown RBP6.61□□□□□ -1.35
RBM39-228ENST00000471635 TAF6LQ9Y6J9 622 aa6.61□□□□□ -1.35
RBM39-228ENST00000471635 TP53P04637 393 aaPredicted RBP6.6□□□□□ -1.35
RBM39-228ENST00000471635 GSNP06396 782 aa6.6□□□□□ -1.35
RBM39-228ENST00000471635 VAV1P15498 845 aa6.6□□□□□ -1.35
RBM39-228ENST00000471635 ZYXQ15942 572 aaKnown RBP6.6□□□□□ -1.35
RBM39-228ENST00000471635 GALNT18Q6P9A2 607 aa6.6□□□□□ -1.35
RBM39-228ENST00000471635 CCDC81Q6ZN84 652 aa6.6□□□□□ -1.35
RBM39-228ENST00000471635 TAB3Q8N5C8 712 aaPredicted RBP6.6□□□□□ -1.35
RBM39-228ENST00000471635 TEPSINQ96N21 525 aa6.6□□□□□ -1.35
RBM39-228ENST00000471635 TM9SF2Q99805 663 aa6.6□□□□□ -1.35
RBM39-228ENST00000471635 GCM1Q9NP62 436 aa6.6□□□□□ -1.35
RBM39-228ENST00000471635 PRR13Q9NZ81 148 aa6.6□□□□□ -1.35
RBM39-228ENST00000471635 MYRFQ9Y2G1 1151 aa6.6□□□□□ -1.35
RBM39-228ENST00000471635 SCAMP3O14828 347 aaKnown RBP6.59□□□□□ -1.35
RBM39-228ENST00000471635 PNLIPP16233 465 aa6.59□□□□□ -1.35
RBM39-228ENST00000471635 ENDOUP21128 410 aaKnown RBP6.59□□□□□ -1.35
RBM39-228ENST00000471635 GUCY2CP25092 1073 aa6.59□□□□□ -1.35
RBM39-228ENST00000471635 SRSF3P84103 164 aaKnown RBP6.59□□□□□ -1.35
RBM39-228ENST00000471635 PAK2Q13177 524 aa6.59□□□□□ -1.35
RBM39-228ENST00000471635 AXDND1Q5T1B0 1012 aaPredicted RBP6.59□□□□□ -1.35
RBM39-228ENST00000471635 UNC5AQ6ZN44 842 aa6.59□□□□□ -1.35
RBM39-228ENST00000471635 LSRQ86X29 649 aaPredicted RBP6.59□□□□□ -1.35
RBM39-228ENST00000471635 SP8Q8IXZ3 490 aa6.59□□□□□ -1.35
RBM39-228ENST00000471635 SMARCC1Q92922 1105 aaPredicted RBP6.59□□□□□ -1.35
RBM39-228ENST00000471635 BRF1Q92994 677 aa6.59□□□□□ -1.35
RBM39-228ENST00000471635 WTIPA6NIX2 430 aaPredicted RBP6.58□□□□□ -1.36
RBM39-228ENST00000471635 H0Y8X5 98 aa6.58□□□□□ -1.36
RBM39-228ENST00000471635 GSTM1P09488 218 aa6.58□□□□□ -1.36
RBM39-228ENST00000471635 PUM1Q14671 1186 aaKnown RBP eCLIP6.58□□□□□ -1.36
RBM39-228ENST00000471635 RTP2Q5QGT7 225 aa6.58□□□□□ -1.36
RBM39-228ENST00000471635 NOL9Q5SY16 702 aaKnown RBP6.58□□□□□ -1.36
RBM39-228ENST00000471635 CWF19L1Q69YN2 538 aaKnown RBP6.58□□□□□ -1.36
RBM39-228ENST00000471635 SLCO6A1Q86UG4 719 aa6.58□□□□□ -1.36
RBM39-228ENST00000471635 ZNF654Q8IZM8 581 aa6.58□□□□□ -1.36
RBM39-228ENST00000471635 RBBP8NLQ8NC74 664 aaPredicted RBP6.58□□□□□ -1.36
RBM39-228ENST00000471635 GP6Q9HCN6 339 aa6.58□□□□□ -1.36
RBM39-228ENST00000471635 GINM1Q9NU53 330 aa6.58□□□□□ -1.36
RBM39-228ENST00000471635 INSRRP14616 1297 aa6.57□□□□□ -1.36
RBM39-228ENST00000471635 PRKCAP17252 672 aa6.57□□□□□ -1.36
RBM39-228ENST00000471635 VIPR1P32241 457 aa6.57□□□□□ -1.36
RBM39-228ENST00000471635 CEBPAP49715 358 aaPredicted RBP6.57□□□□□ -1.36
RBM39-228ENST00000471635 ZNF445P59923 1031 aa6.57□□□□□ -1.36
RBM39-228ENST00000471635 SSPNQ14714 243 aa6.57□□□□□ -1.36
RBM39-228ENST00000471635 NAT16Q8N8M0 369 aa6.57□□□□□ -1.36
RBM39-228ENST00000471635 NUP43Q8NFH3 380 aa6.57□□□□□ -1.36
RBM39-228ENST00000471635 FEZF2Q8TBJ5 459 aa6.57□□□□□ -1.36
RBM39-228ENST00000471635 CRBNQ96SW2 442 aa6.57□□□□□ -1.36
RBM39-228ENST00000471635 SIRT5Q9NXA8 310 aa6.57□□□□□ -1.36
RBM39-228ENST00000471635 MBD1Q9UIS9 605 aaPredicted RBP6.57□□□□□ -1.36
RBM39-228ENST00000471635 A0A1W2PQ45 241 aaPredicted RBP6.56□□□□□ -1.36
RBM39-228ENST00000471635 A0A1W2PQY0 241 aa6.56□□□□□ -1.36
RBM39-228ENST00000471635 CD247P20963 164 aa6.56□□□□□ -1.36
RBM39-228ENST00000471635 VAMP1P23763 118 aa6.56□□□□□ -1.36
RBM39-228ENST00000471635 ARL4AP40617 200 aa6.56□□□□□ -1.36
RBM39-228ENST00000471635 ERVFRD-1P60508 538 aa6.56□□□□□ -1.36
RBM39-228ENST00000471635 METTL16Q86W50 562 aaKnown RBP6.56□□□□□ -1.36
RBM39-228ENST00000471635 TMEM52Q8NDY8 209 aa6.56□□□□□ -1.36
RBM39-228ENST00000471635 JMJD8Q96S16 334 aa6.56□□□□□ -1.36
RBM39-228ENST00000471635 SLC12A9Q9BXP2 914 aa6.56□□□□□ -1.36
RBM39-228ENST00000471635 IMPACTQ9P2X3 320 aa6.56□□□□□ -1.36
RBM39-228ENST00000471635 EFR3BQ9Y2G0 817 aa6.56□□□□□ -1.36
RBM39-228ENST00000471635 ZNF451Q9Y4E5 1061 aa6.56□□□□□ -1.36
RBM39-228ENST00000471635 ZC3H12DA2A288 527 aaKnown RBP6.55□□□□□ -1.36
RBM39-228ENST00000471635 HRKO00198 91 aa6.55□□□□□ -1.36
RBM39-228ENST00000471635 MPOP05164 745 aa6.55□□□□□ -1.36
RBM39-228ENST00000471635 PI3P19957 117 aa6.55□□□□□ -1.36
RBM39-228ENST00000471635 AFF3P51826 1226 aaKnown RBP6.55□□□□□ -1.36
RBM39-228ENST00000471635 EPHB3P54753 998 aa6.55□□□□□ -1.36
RBM39-228ENST00000471635 CYP4F8P98187 520 aa6.55□□□□□ -1.36
RBM39-228ENST00000471635 ANKRD39Q53RE8 183 aa6.55□□□□□ -1.36
RBM39-228ENST00000471635 C9orf131Q5VYM1 1079 aa6.55□□□□□ -1.36
RBM39-228ENST00000471635 FIBCD1Q8N539 461 aa6.55□□□□□ -1.36
RBM39-228ENST00000471635 DACT3Q96B18 629 aaPredicted RBP6.55□□□□□ -1.36
RBM39-228ENST00000471635 NOL6Q9H6R4 1146 aaKnown RBP6.55□□□□□ -1.36
RBM39-228ENST00000471635 LTBP3Q9NS15 1303 aa6.54□□□□□ -1.36
RBM39-228ENST00000471635 NUDT19A8MXV4 375 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms