RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 TPRNQ4KMQ1 711 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 NOM1Q5C9Z4 860 aaKnown RBP10.73□□□□□ -0.69
VPS52-216ENST00000471309 DPY19L2Q6NUT2 758 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 SCYL3Q8IZE3 742 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 REXO1Q8N1G1 1221 aaKnown RBP10.73□□□□□ -0.69
VPS52-216ENST00000471309 KRI1Q8N9T8 703 aaKnown RBP10.73□□□□□ -0.69
VPS52-216ENST00000471309 ENGASEQ8NFI3 743 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 LPAR1Q92633 364 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 FEZ1Q99689 392 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 KIAA1683Q9H0B3 1180 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 GLT8D2Q9H1C3 349 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 RIC8AQ9NPQ8 531 aa10.73□□□□□ -0.69
VPS52-216ENST00000471309 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.73□□□□□ -0.69
VPS52-216ENST00000471309 FBXO2Q9UK22 296 aaPredicted RBP10.73□□□□□ -0.69
VPS52-216ENST00000471309 TMEM232C9JQI7 657 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 KINO60870 393 aaKnown RBP10.72□□□□□ -0.69
VPS52-216ENST00000471309 MARCKSP29966 332 aaPredicted RBP10.72□□□□□ -0.69
VPS52-216ENST00000471309 DEKP35659 375 aaKnown RBP10.72□□□□□ -0.69
VPS52-216ENST00000471309 ATP2C1P98194 919 aaPredicted RBP10.72□□□□□ -0.69
VPS52-216ENST00000471309 TRAF1Q13077 416 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 IKQ13123 557 aaPredicted RBP10.72□□□□□ -0.69
VPS52-216ENST00000471309 ORC2Q13416 577 aaPredicted RBP10.72□□□□□ -0.69
VPS52-216ENST00000471309 SNW1Q13573 536 aaKnown RBP10.72□□□□□ -0.69
VPS52-216ENST00000471309 NONOQ15233 471 aaKnown RBP eCLIP10.72□□□□□ -0.69
VPS52-216ENST00000471309 MAP3K11Q16584 847 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 SUPT20HL1Q3ZLR7 823 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 KIAA1755Q5JYT7 1200 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 NOL9Q5SY16 702 aaKnown RBP10.72□□□□□ -0.69
VPS52-216ENST00000471309 FAM83BQ5T0W9 1011 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 L1TD1Q5T7N2 865 aaKnown RBP10.72□□□□□ -0.69
VPS52-216ENST00000471309 RESP18Q5W5W9 173 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 SHC4Q6S5L8 630 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 RBM43Q6ZSC3 357 aaKnown RBP10.72□□□□□ -0.69
VPS52-216ENST00000471309 USP50Q70EL3 339 aaPredicted RBP10.72□□□□□ -0.69
VPS52-216ENST00000471309 FAM160B2Q86V87 743 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 GAS2L3Q86XJ1 694 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 TEX2Q8IWB9 1127 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 FMR1NBQ8N0W7 255 aaPredicted RBP10.72□□□□□ -0.69
VPS52-216ENST00000471309 SPICE1Q8N0Z3 855 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 ZNF579Q8NAF0 562 aaKnown RBP10.72□□□□□ -0.69
VPS52-216ENST00000471309 RASGRP4Q8TDF6 673 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 FERMT2Q96AC1 680 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 COA7Q96BR5 231 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 AMNQ9BXJ7 453 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 GLIS2Q9BZE0 524 aaPredicted RBP10.72□□□□□ -0.69
VPS52-216ENST00000471309 TNMDQ9H2S6 317 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 PRR12Q9ULL5 1215 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 HPSEQ9Y251 543 aa10.72□□□□□ -0.69
VPS52-216ENST00000471309 SRPRBQ9Y5M8 271 aaKnown RBP10.72□□□□□ -0.69
VPS52-216ENST00000471309 WNT7AO00755 349 aa10.71□□□□□ -0.69
VPS52-216ENST00000471309 WDR46O15213 610 aaKnown RBP10.71□□□□□ -0.69
VPS52-216ENST00000471309 CTAGE5O15320 804 aa10.71□□□□□ -0.69
VPS52-216ENST00000471309 PFKFB1P16118 471 aa10.71□□□□□ -0.69
VPS52-216ENST00000471309 ATP2B1P20020 1258 aa10.71□□□□□ -0.69
VPS52-216ENST00000471309 INPP5BP32019 993 aa10.71□□□□□ -0.69
VPS52-216ENST00000471309 CLK2P49760 499 aaKnown RBP10.71□□□□□ -0.69
VPS52-216ENST00000471309 MRE11P49959 708 aa10.71□□□□□ -0.69
VPS52-216ENST00000471309 PARP14Q460N5 1801 aa10.71□□□□□ -0.69
VPS52-216ENST00000471309 RBBP6Q7Z6E9 1792 aaKnown RBP10.71□□□□□ -0.69
VPS52-216ENST00000471309 ZC3H15Q8WU90 426 aaKnown RBP10.71□□□□□ -0.69
VPS52-216ENST00000471309 CHURC1Q8WUH1 139 aa10.71□□□□□ -0.69
VPS52-216ENST00000471309 CUL5Q93034 780 aa10.71□□□□□ -0.69
VPS52-216ENST00000471309 DCPSQ96C86 337 aaKnown RBP10.71□□□□□ -0.69
VPS52-216ENST00000471309 KLRG1Q96E93 195 aa10.71□□□□□ -0.69
VPS52-216ENST00000471309 WRNIP1Q96S55 665 aa10.71□□□□□ -0.69
VPS52-216ENST00000471309 WDR18Q9BV38 432 aa10.71□□□□□ -0.69
VPS52-216ENST00000471309 RANBP17Q9H2T7 1088 aaKnown RBP10.71□□□□□ -0.69
VPS52-216ENST00000471309 AS3MTQ9HBK9 375 aa10.71□□□□□ -0.69
VPS52-216ENST00000471309 FEM1BQ9UK73 627 aa10.71□□□□□ -0.69
VPS52-216ENST00000471309 A0A1B0GVL5 298 aa10.7□□□□□ -0.7
VPS52-216ENST00000471309 GLTPD2A6NH11 291 aa10.7□□□□□ -0.7
VPS52-216ENST00000471309 LAD1O00515 517 aa10.7□□□□□ -0.7
VPS52-216ENST00000471309 EPHX2P34913 555 aa10.7□□□□□ -0.7
VPS52-216ENST00000471309 NDUFA8P51970 172 aa10.7□□□□□ -0.7
VPS52-216ENST00000471309 MRPL12P52815 198 aaKnown RBP10.7□□□□□ -0.7
VPS52-216ENST00000471309 USP14P54578 494 aa10.7□□□□□ -0.7
VPS52-216ENST00000471309 ZNF174Q15697 407 aa10.7□□□□□ -0.7
VPS52-216ENST00000471309 ZYXQ15942 572 aaKnown RBP10.7□□□□□ -0.7
VPS52-216ENST00000471309 INF2Q27J81 1249 aa10.7□□□□□ -0.7
VPS52-216ENST00000471309 ARL6IP4Q66PJ3 421 aaKnown RBP10.7□□□□□ -0.7
VPS52-216ENST00000471309 MCTP2Q6DN12 878 aa10.7□□□□□ -0.7
VPS52-216ENST00000471309 CCDC84Q86UT8 332 aaPredicted RBP10.7□□□□□ -0.7
VPS52-216ENST00000471309 FBXO11Q86XK2 927 aa10.7□□□□□ -0.7
VPS52-216ENST00000471309 SULF1Q8IWU6 871 aa10.7□□□□□ -0.7
VPS52-216ENST00000471309 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.7□□□□□ -0.7
VPS52-216ENST00000471309 TIGD1Q96MW7 591 aa10.7□□□□□ -0.7
VPS52-216ENST00000471309 FUCA2Q9BTY2 467 aa10.7□□□□□ -0.7
VPS52-216ENST00000471309 TSPY26PQ9H489 355 aa10.7□□□□□ -0.7
VPS52-216ENST00000471309 GRPEL1Q9HAV7 217 aa10.7□□□□□ -0.7
VPS52-216ENST00000471309 PICK1Q9NRD5 415 aa10.7□□□□□ -0.7
VPS52-216ENST00000471309 PCDHA1Q9Y5I3 950 aa10.7□□□□□ -0.7
VPS52-216ENST00000471309 IQCA1LA6NCM1 817 aa10.69□□□□□ -0.7
VPS52-216ENST00000471309 ADM5C9JUS6 153 aa10.69□□□□□ -0.7
VPS52-216ENST00000471309 PTPRAP18433 802 aa10.69□□□□□ -0.7
VPS52-216ENST00000471309 MCM7P33993 719 aa10.69□□□□□ -0.7
VPS52-216ENST00000471309 PTGDRQ13258 359 aa10.69□□□□□ -0.7
VPS52-216ENST00000471309 AP3B2Q13367 1082 aa10.69□□□□□ -0.7
VPS52-216ENST00000471309 PRAMEF18Q5VWM3 479 aa10.69□□□□□ -0.7
VPS52-216ENST00000471309 NEK8Q86SG6 692 aa10.69□□□□□ -0.7
VPS52-216ENST00000471309 TBCKQ8TEA7 893 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms