RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 GRB10Q13322 594 aa6.21□□□□□ -1.42
BRCA2-202ENST00000470094 SLC14A2Q15849 920 aa6.21□□□□□ -1.42
BRCA2-202ENST00000470094 RTP2Q5QGT7 225 aa6.21□□□□□ -1.42
BRCA2-202ENST00000470094 POMZP3Q6PJE2 187 aa6.21□□□□□ -1.42
BRCA2-202ENST00000470094 MPZL3Q6UWV2 235 aa6.21□□□□□ -1.42
BRCA2-202ENST00000470094 CEP128Q6ZU80 1094 aa6.21□□□□□ -1.42
BRCA2-202ENST00000470094 ARHGEF39Q8N4T4 335 aa6.21□□□□□ -1.42
BRCA2-202ENST00000470094 MICAL1Q8TDZ2 1067 aa6.21□□□□□ -1.42
BRCA2-202ENST00000470094 PPP1R14AQ96A00 147 aa6.21□□□□□ -1.42
BRCA2-202ENST00000470094 HHIPL1Q96JK4 782 aa6.21□□□□□ -1.42
BRCA2-202ENST00000470094 TRIM55Q9BYV6 548 aa6.21□□□□□ -1.42
BRCA2-202ENST00000470094 ST7Q9NRC1 585 aa6.21□□□□□ -1.42
BRCA2-202ENST00000470094 ERVK13-1Q9NX77 482 aa6.21□□□□□ -1.42
BRCA2-202ENST00000470094 AKT3Q9Y243 479 aa6.21□□□□□ -1.42
BRCA2-202ENST00000470094 CARMIL2Q6F5E8 1435 aa6.21□□□□□ -1.42
BRCA2-202ENST00000470094 NOP56O00567 594 aaKnown RBP6.2□□□□□ -1.42
BRCA2-202ENST00000470094 KLF4O43474 513 aa6.2□□□□□ -1.42
BRCA2-202ENST00000470094 GJB6O95452 261 aa6.2□□□□□ -1.42
BRCA2-202ENST00000470094 GTF2F1P35269 517 aaKnown RBP eCLIP6.2□□□□□ -1.42
BRCA2-202ENST00000470094 AMPD2Q01433 879 aa6.2□□□□□ -1.42
BRCA2-202ENST00000470094 SF3A1Q15459 793 aaKnown RBP6.2□□□□□ -1.42
BRCA2-202ENST00000470094 DDR2Q16832 855 aa6.2□□□□□ -1.42
BRCA2-202ENST00000470094 TIGD5Q53EQ6 642 aa6.2□□□□□ -1.42
BRCA2-202ENST00000470094 EEPD1Q7L9B9 569 aa6.2□□□□□ -1.42
BRCA2-202ENST00000470094 BVESQ8NE79 360 aa6.2□□□□□ -1.42
BRCA2-202ENST00000470094 FCRL3Q96P31 734 aaPredicted RBP6.2□□□□□ -1.42
BRCA2-202ENST00000470094 SP110Q9HB58 689 aa6.2□□□□□ -1.42
BRCA2-202ENST00000470094 FAM53CQ9NYF3 392 aa6.2□□□□□ -1.42
BRCA2-202ENST00000470094 GPR160Q9UJ42 338 aa6.2□□□□□ -1.42
BRCA2-202ENST00000470094 GPR55Q9Y2T6 319 aaPredicted RBP6.2□□□□□ -1.42
BRCA2-202ENST00000470094 SUSD5O60279 629 aa6.19□□□□□ -1.42
BRCA2-202ENST00000470094 VAMP4O75379 141 aa6.19□□□□□ -1.42
BRCA2-202ENST00000470094 KCNH1O95259 989 aa6.19□□□□□ -1.42
BRCA2-202ENST00000470094 IFNGR1P15260 489 aa6.19□□□□□ -1.42
BRCA2-202ENST00000470094 RTP1P59025 263 aa6.19□□□□□ -1.42
BRCA2-202ENST00000470094 SNX17Q15036 470 aa6.19□□□□□ -1.42
BRCA2-202ENST00000470094 DPY19L1Q2PZI1 675 aa6.19□□□□□ -1.42
BRCA2-202ENST00000470094 SV2CQ496J9 727 aa6.19□□□□□ -1.42
BRCA2-202ENST00000470094 CYP2R1Q6VVX0 501 aa6.19□□□□□ -1.42
BRCA2-202ENST00000470094 CELF2-AS1Q8N7Q2 184 aa6.19□□□□□ -1.42
BRCA2-202ENST00000470094 ZNF513Q8N8E2 541 aaPredicted RBP6.19□□□□□ -1.42
BRCA2-202ENST00000470094 RNF32Q9H0A6 362 aa6.19□□□□□ -1.42
BRCA2-202ENST00000470094 CWC22Q9HCG8 908 aaKnown RBP6.19□□□□□ -1.42
BRCA2-202ENST00000470094 TAF6LQ9Y6J9 622 aa6.19□□□□□ -1.42
BRCA2-202ENST00000470094 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.19□□□□□ -1.42
BRCA2-202ENST00000470094 ZNF503-AS2A6NEH8 195 aa6.18□□□□□ -1.42
BRCA2-202ENST00000470094 FADS2P1A8MWK0 482 aa6.18□□□□□ -1.42
BRCA2-202ENST00000470094 STXBP3O00186 592 aa6.18□□□□□ -1.42
BRCA2-202ENST00000470094 U2SURPO15042 1029 aaKnown RBP6.18□□□□□ -1.42
BRCA2-202ENST00000470094 FGF10O15520 208 aaPredicted RBP6.18□□□□□ -1.42
BRCA2-202ENST00000470094 NRDCO43847 1150 aa6.18□□□□□ -1.42
BRCA2-202ENST00000470094 PSPNO60542 156 aa6.18□□□□□ -1.42
BRCA2-202ENST00000470094 SEPHS1P49903 392 aa6.18□□□□□ -1.42
BRCA2-202ENST00000470094 RAB33AQ14088 237 aa6.18□□□□□ -1.42
BRCA2-202ENST00000470094 EEF1DP3Q658K8 133 aa6.18□□□□□ -1.42
BRCA2-202ENST00000470094 MRM1Q6IN84 353 aaKnown RBP6.18□□□□□ -1.42
BRCA2-202ENST00000470094 GALNT18Q6P9A2 607 aa6.18□□□□□ -1.42
BRCA2-202ENST00000470094 ARMC5Q96C12 935 aa6.18□□□□□ -1.42
BRCA2-202ENST00000470094 LIN37Q96GY3 246 aaPredicted RBP6.18□□□□□ -1.42
BRCA2-202ENST00000470094 HIRIP3Q9BW71 556 aaPredicted RBP6.18□□□□□ -1.42
BRCA2-202ENST00000470094 GOLGA2P5Q9HBQ8 144 aa6.18□□□□□ -1.42
BRCA2-202ENST00000470094 LRP2BPQ9P2M1 347 aa6.18□□□□□ -1.42
BRCA2-202ENST00000470094 EMC9Q9Y3B6 208 aa6.18□□□□□ -1.42
BRCA2-202ENST00000470094 BACE2Q9Y5Z0 518 aa6.18□□□□□ -1.42
BRCA2-202ENST00000470094 A0A1W2PQ45 241 aaPredicted RBP6.17□□□□□ -1.42
BRCA2-202ENST00000470094 A0A1W2PQY0 241 aa6.17□□□□□ -1.42
BRCA2-202ENST00000470094 LRRC10BA6NIK2 292 aa6.17□□□□□ -1.42
BRCA2-202ENST00000470094 WTIPA6NIX2 430 aaPredicted RBP6.17□□□□□ -1.42
BRCA2-202ENST00000470094 AGRPO00253 132 aa6.17□□□□□ -1.42
BRCA2-202ENST00000470094 AURKAO14965 403 aa6.17□□□□□ -1.42
BRCA2-202ENST00000470094 HSF5Q4G112 596 aaPredicted RBP6.17□□□□□ -1.42
BRCA2-202ENST00000470094 HLA-DQA1Q5Y7H0 255 aa6.17□□□□□ -1.42
BRCA2-202ENST00000470094 RCSD1Q6JBY9 416 aa6.17□□□□□ -1.42
BRCA2-202ENST00000470094 SLCO6A1Q86UG4 719 aa6.17□□□□□ -1.42
BRCA2-202ENST00000470094 JAMLQ86YT9 394 aa6.17□□□□□ -1.42
BRCA2-202ENST00000470094 KSR1Q8IVT5 923 aa6.17□□□□□ -1.42
BRCA2-202ENST00000470094 TRIM59Q8IWR1 403 aa6.17□□□□□ -1.42
BRCA2-202ENST00000470094 PTCHD1Q96NR3 888 aa6.17□□□□□ -1.42
BRCA2-202ENST00000470094 FMNL2Q96PY5 1086 aa6.17□□□□□ -1.42
BRCA2-202ENST00000470094 MCMBPQ9BTE3 642 aa6.17□□□□□ -1.42
BRCA2-202ENST00000470094 SLC6A17Q9H1V8 727 aa6.17□□□□□ -1.42
BRCA2-202ENST00000470094 EPN3Q9H201 632 aa6.17□□□□□ -1.42
BRCA2-202ENST00000470094 C2orf71A6NGG8 1288 aa6.16□□□□□ -1.42
BRCA2-202ENST00000470094 NOTOA8MTQ0 251 aa6.16□□□□□ -1.42
BRCA2-202ENST00000470094 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.16□□□□□ -1.42
BRCA2-202ENST00000470094 TBC1D8O95759 1140 aa6.16□□□□□ -1.42
BRCA2-202ENST00000470094 MLANAQ16655 118 aa6.16□□□□□ -1.42
BRCA2-202ENST00000470094 NBPF6Q5VWK0 638 aa6.16□□□□□ -1.42
BRCA2-202ENST00000470094 NLRX1Q86UT6 975 aa6.16□□□□□ -1.42
BRCA2-202ENST00000470094 ZNF227Q86WZ6 799 aa6.16□□□□□ -1.42
BRCA2-202ENST00000470094 TMEM52Q8NDY8 209 aa6.16□□□□□ -1.42
BRCA2-202ENST00000470094 SREK1Q8WXA9 508 aaKnown RBP6.16□□□□□ -1.42
BRCA2-202ENST00000470094 NBPF4Q96M43 638 aa6.16□□□□□ -1.42
BRCA2-202ENST00000470094 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.16□□□□□ -1.42
BRCA2-202ENST00000470094 YBX2Q9Y2T7 364 aaKnown RBP6.16□□□□□ -1.42
BRCA2-202ENST00000470094 A0A1W2PQ27 194 aa6.15□□□□□ -1.42
BRCA2-202ENST00000470094 A0A1W2PQ64 194 aa6.15□□□□□ -1.42
BRCA2-202ENST00000470094 A0A1W2PQC6 194 aa6.15□□□□□ -1.42
BRCA2-202ENST00000470094 A0A1W2PQD8 194 aa6.15□□□□□ -1.42
BRCA2-202ENST00000470094 ITGAVP06756 1048 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms