RNA–Protein interactions for RNA: ENST00000469017.6

SPIN1-203, Transcript of spindlin 1, humanhuman

TSL 2

Gene SPIN1, Length 2,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-203ENST00000469017 SMARCA1P28370 1054 aa23.34■■□□□ 1.33
SPIN1-203ENST00000469017 CPXCR1Q8N123 301 aa23.34■■□□□ 1.33
SPIN1-203ENST00000469017 VPS37CA5D8V6 355 aaPredicted RBP23.34■■□□□ 1.33
SPIN1-203ENST00000469017 SPDYE16A6NNV3 312 aaPredicted RBP23.34■■□□□ 1.33
SPIN1-203ENST00000469017 AOC2O75106 756 aa23.34■■□□□ 1.33
SPIN1-203ENST00000469017 COG2Q14746 738 aa23.34■■□□□ 1.33
SPIN1-203ENST00000469017 PNMA6FA0A0J9YX94 578 aa23.33■■□□□ 1.33
SPIN1-203ENST00000469017 DSG3P32926 999 aa23.33■■□□□ 1.33
SPIN1-203ENST00000469017 DEFB115Q30KQ5 88 aa23.33■■□□□ 1.33
SPIN1-203ENST00000469017 C8orf76Q96K31 380 aa23.33■■□□□ 1.33
SPIN1-203ENST00000469017 RANBP17Q9H2T7 1088 aaKnown RBP23.33■■□□□ 1.33
SPIN1-203ENST00000469017 CWC22Q9HCG8 908 aaKnown RBP23.33■■□□□ 1.33
SPIN1-203ENST00000469017 RAVER2Q9HCJ3 691 aaKnown RBP23.33■■□□□ 1.33
SPIN1-203ENST00000469017 PDHXO00330 501 aa23.32■■□□□ 1.32
SPIN1-203ENST00000469017 VWA5AO00534 786 aa23.32■■□□□ 1.32
SPIN1-203ENST00000469017 PLA2G6O60733 806 aa23.32■■□□□ 1.32
SPIN1-203ENST00000469017 HOXA7P31268 230 aaPredicted RBP23.32■■□□□ 1.32
SPIN1-203ENST00000469017 IRX3P78415 501 aaPredicted RBP23.32■■□□□ 1.32
SPIN1-203ENST00000469017 AGBL1Q96MI9 1066 aa23.32■■□□□ 1.32
SPIN1-203ENST00000469017 IGF2BP3O00425 579 aaKnown RBP eCLIP23.32■■□□□ 1.32
SPIN1-203ENST00000469017 ZNF536O15090 1300 aa23.31■■□□□ 1.32
SPIN1-203ENST00000469017 STXBP3O00186 592 aa23.31■■□□□ 1.32
SPIN1-203ENST00000469017 CCDC102AQ96A19 550 aa23.31■■□□□ 1.32
SPIN1-203ENST00000469017 SLC38A10Q9HBR0 1119 aa23.31■■□□□ 1.32
SPIN1-203ENST00000469017 STX6O43752 255 aa23.31■■□□□ 1.32
SPIN1-203ENST00000469017 KRT40Q6A162 431 aa23.31■■□□□ 1.32
SPIN1-203ENST00000469017 CAPNS2Q96L46 248 aa23.31■■□□□ 1.32
SPIN1-203ENST00000469017 ZDHHC9Q9Y397 364 aa23.31■■□□□ 1.32
SPIN1-203ENST00000469017 RASSF10A6NK89 507 aa23.3■■□□□ 1.32
SPIN1-203ENST00000469017 FERMT3Q86UX7 667 aa23.3■■□□□ 1.32
SPIN1-203ENST00000469017 PAGR1Q9BTK6 254 aa23.3■■□□□ 1.32
SPIN1-203ENST00000469017 BARHL2Q9NY43 387 aa23.3■■□□□ 1.32
SPIN1-203ENST00000469017 PCDHA1Q9Y5I3 950 aa23.3■■□□□ 1.32
SPIN1-203ENST00000469017 H3BQV1 296 aa23.29■■□□□ 1.32
SPIN1-203ENST00000469017 NAPAP54920 295 aa23.29■■□□□ 1.32
SPIN1-203ENST00000469017 HERVK_113P62684 666 aa23.29■■□□□ 1.32
SPIN1-203ENST00000469017 KIF23Q02241 960 aaPredicted RBP23.29■■□□□ 1.32
SPIN1-203ENST00000469017 TMEM132BQ14DG7 1078 aa23.29■■□□□ 1.32
SPIN1-203ENST00000469017 IFFO2Q5TF58 517 aa23.29■■□□□ 1.32
SPIN1-203ENST00000469017 FBXO11Q86XK2 927 aa23.29■■□□□ 1.32
SPIN1-203ENST00000469017 WASF1Q92558 559 aa23.29■■□□□ 1.32
SPIN1-203ENST00000469017 HHIPL1Q96JK4 782 aa23.29■■□□□ 1.32
SPIN1-203ENST00000469017 MTMR6Q9Y217 621 aa23.29■■□□□ 1.32
SPIN1-203ENST00000469017 PLS1Q14651 629 aa23.29■■□□□ 1.32
SPIN1-203ENST00000469017 REPS2Q8NFH8 660 aa23.29■■□□□ 1.32
SPIN1-203ENST00000469017 FBXO18Q8NFZ0 1043 aa23.29■■□□□ 1.32
SPIN1-203ENST00000469017 TXNRD2Q9NNW7 524 aa23.29■■□□□ 1.32
SPIN1-203ENST00000469017 HOMER2Q9NSB8 354 aa23.29■■□□□ 1.32
SPIN1-203ENST00000469017 HOXC10Q9NYD6 342 aa23.29■■□□□ 1.32
SPIN1-203ENST00000469017 BTBD7Q9P203 1132 aa23.29■■□□□ 1.32
SPIN1-203ENST00000469017 FOXD4L6Q3SYB3 417 aaPredicted RBP23.28■■□□□ 1.32
SPIN1-203ENST00000469017 FOXD4L3Q6VB84 417 aaPredicted RBP23.28■■□□□ 1.32
SPIN1-203ENST00000469017 OXER1Q8TDS5 423 aa23.28■■□□□ 1.32
SPIN1-203ENST00000469017 RBM27Q9P2N5 1060 aaKnown RBP23.28■■□□□ 1.32
SPIN1-203ENST00000469017 ADAMTS5Q9UNA0 930 aa23.28■■□□□ 1.32
SPIN1-203ENST00000469017 KIF3AQ9Y496 699 aa23.28■■□□□ 1.32
SPIN1-203ENST00000469017 RIPK3Q9Y572 518 aa23.28■■□□□ 1.32
SPIN1-203ENST00000469017 CTDP1Q9Y5B0 961 aaPredicted RBP23.28■■□□□ 1.32
SPIN1-203ENST00000469017 MANSC4A6NHS7 340 aaPredicted RBP23.28■■□□□ 1.32
SPIN1-203ENST00000469017 MCTP1Q6DN14 999 aa23.28■■□□□ 1.32
SPIN1-203ENST00000469017 CHAMP1Q96JM3 812 aa23.28■■□□□ 1.32
SPIN1-203ENST00000469017 AMNQ9BXJ7 453 aa23.28■■□□□ 1.32
SPIN1-203ENST00000469017 R3HDMLQ9H3Y0 253 aa23.28■■□□□ 1.32
SPIN1-203ENST00000469017 CCPG1Q9ULG6 757 aa23.28■■□□□ 1.32
SPIN1-203ENST00000469017 TESPA1A2RU30 521 aaPredicted RBP23.27■■□□□ 1.32
SPIN1-203ENST00000469017 ZBED4O75132 1171 aa23.27■■□□□ 1.32
SPIN1-203ENST00000469017 OSBPP22059 807 aa23.27■■□□□ 1.32
SPIN1-203ENST00000469017 ANKRD23Q86SG2 305 aa23.27■■□□□ 1.32
SPIN1-203ENST00000469017 ZNF214Q9UL59 606 aaPredicted RBP23.27■■□□□ 1.32
SPIN1-203ENST00000469017 NLRP5P59047 1200 aa23.26■■□□□ 1.31
SPIN1-203ENST00000469017 TRIM29Q14134 588 aa23.26■■□□□ 1.31
SPIN1-203ENST00000469017 NPY5RQ15761 445 aa23.26■■□□□ 1.31
SPIN1-203ENST00000469017 RASGRP4Q8TDF6 673 aa23.26■■□□□ 1.31
SPIN1-203ENST00000469017 PHF20Q9BVI0 1012 aa23.26■■□□□ 1.31
SPIN1-203ENST00000469017 KIF28PB7ZC32 967 aa23.26■■□□□ 1.31
SPIN1-203ENST00000469017 ALAS1P13196 640 aa23.26■■□□□ 1.31
SPIN1-203ENST00000469017 PDCP20941 246 aa23.26■■□□□ 1.31
SPIN1-203ENST00000469017 NR5A1Q13285 461 aa23.26■■□□□ 1.31
SPIN1-203ENST00000469017 PABPC4Q13310 644 aaKnown RBP eCLIP23.26■■□□□ 1.31
SPIN1-203ENST00000469017 NOM1Q5C9Z4 860 aaKnown RBP23.26■■□□□ 1.31
SPIN1-203ENST00000469017 SMCR8Q8TEV9 937 aaPredicted RBP23.26■■□□□ 1.31
SPIN1-203ENST00000469017 SMCO2A6NFE2 343 aa23.25■■□□□ 1.31
SPIN1-203ENST00000469017 CNMDO75829 334 aa23.25■■□□□ 1.31
SPIN1-203ENST00000469017 ECM2O94769 699 aaPredicted RBP23.25■■□□□ 1.31
SPIN1-203ENST00000469017 MMP1P03956 469 aa23.25■■□□□ 1.31
SPIN1-203ENST00000469017 ICAM1P05362 532 aa23.25■■□□□ 1.31
SPIN1-203ENST00000469017 Q3C1V9 767 aa23.25■■□□□ 1.31
SPIN1-203ENST00000469017 SNRNP48Q6IEG0 339 aaKnown RBP23.25■■□□□ 1.31
SPIN1-203ENST00000469017 LBX2Q6XYB7 198 aa23.25■■□□□ 1.31
SPIN1-203ENST00000469017 IFNL1Q8IU54 200 aa23.25■■□□□ 1.31
SPIN1-203ENST00000469017 TBC1D5Q92609 795 aa23.25■■□□□ 1.31
SPIN1-203ENST00000469017 RBPJLQ9UBG7 517 aa23.25■■□□□ 1.31
SPIN1-203ENST00000469017 BTBD18B2RXH4 712 aa23.24■■□□□ 1.31
SPIN1-203ENST00000469017 OPLAHO14841 1288 aa23.24■■□□□ 1.31
SPIN1-203ENST00000469017 VEGFBP49765 207 aa23.24■■□□□ 1.31
SPIN1-203ENST00000469017 MUM1L1Q5H9M0 696 aa23.24■■□□□ 1.31
SPIN1-203ENST00000469017 FAM173BQ6P4H8 233 aa23.24■■□□□ 1.31
SPIN1-203ENST00000469017 UBE2SQ16763 222 aa23.24■■□□□ 1.31
SPIN1-203ENST00000469017 A0A0G2JMZ2 1700 aa23.24■■□□□ 1.31
SPIN1-203ENST00000469017 BRD1O95696 1058 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms