RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 STXBP3O00186 592 aa8.45□□□□□ -1.06
XRN1-207ENST00000468894 VAMP4O75379 141 aa8.45□□□□□ -1.06
XRN1-207ENST00000468894 EFEMP2O95967 443 aa8.45□□□□□ -1.06
XRN1-207ENST00000468894 RAC2P15153 192 aa8.45□□□□□ -1.06
XRN1-207ENST00000468894 NBPF6Q5VWK0 638 aa8.45□□□□□ -1.06
XRN1-207ENST00000468894 EEPD1Q7L9B9 569 aa8.45□□□□□ -1.06
XRN1-207ENST00000468894 ZSWIM9Q86XI8 627 aa8.45□□□□□ -1.06
XRN1-207ENST00000468894 FAM168AQ92567 244 aa8.45□□□□□ -1.06
XRN1-207ENST00000468894 KIRREL1Q96J84 757 aa8.45□□□□□ -1.06
XRN1-207ENST00000468894 NBPF4Q96M43 638 aa8.45□□□□□ -1.06
XRN1-207ENST00000468894 C19orf44Q9H6X5 657 aa8.45□□□□□ -1.06
XRN1-207ENST00000468894 AURKAO14965 403 aa8.44□□□□□ -1.06
XRN1-207ENST00000468894 FGF10O15520 208 aaPredicted RBP8.44□□□□□ -1.06
XRN1-207ENST00000468894 KIR2DL1P43626 348 aaPredicted RBP8.44□□□□□ -1.06
XRN1-207ENST00000468894 KIR2DL2P43627 348 aaPredicted RBP8.44□□□□□ -1.06
XRN1-207ENST00000468894 AMPD2Q01433 879 aa8.44□□□□□ -1.06
XRN1-207ENST00000468894 CHRNEQ04844 493 aa8.44□□□□□ -1.06
XRN1-207ENST00000468894 RBL2Q08999 1139 aa8.44□□□□□ -1.06
XRN1-207ENST00000468894 NR0B2Q15466 257 aa8.44□□□□□ -1.06
XRN1-207ENST00000468894 DPY19L1Q2PZI1 675 aa8.44□□□□□ -1.06
XRN1-207ENST00000468894 ZNF227Q86WZ6 799 aa8.44□□□□□ -1.06
XRN1-207ENST00000468894 OXR1Q8N573 874 aa8.44□□□□□ -1.06
XRN1-207ENST00000468894 MYLIPQ8WY64 445 aa8.44□□□□□ -1.06
XRN1-207ENST00000468894 PPP1R14AQ96A00 147 aa8.44□□□□□ -1.06
XRN1-207ENST00000468894 MRGPRX3Q96LB0 322 aa8.44□□□□□ -1.06
XRN1-207ENST00000468894 HIRIP3Q9BW71 556 aaPredicted RBP8.44□□□□□ -1.06
XRN1-207ENST00000468894 GPR55Q9Y2T6 319 aaPredicted RBP8.44□□□□□ -1.06
XRN1-207ENST00000468894 MSRB2Q9Y3D2 182 aa8.44□□□□□ -1.06
XRN1-207ENST00000468894 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.44□□□□□ -1.06
XRN1-207ENST00000468894 FADS2P1A8MWK0 482 aa8.43□□□□□ -1.06
XRN1-207ENST00000468894 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.43□□□□□ -1.06
XRN1-207ENST00000468894 TBX1O43435 398 aa8.43□□□□□ -1.06
XRN1-207ENST00000468894 KCNH1O95259 989 aa8.43□□□□□ -1.06
XRN1-207ENST00000468894 SERINC3Q13530 473 aa8.43□□□□□ -1.06
XRN1-207ENST00000468894 KCNMB1Q16558 191 aa8.43□□□□□ -1.06
XRN1-207ENST00000468894 SV2CQ496J9 727 aa8.43□□□□□ -1.06
XRN1-207ENST00000468894 TRIM59Q8IWR1 403 aa8.43□□□□□ -1.06
XRN1-207ENST00000468894 TMEM52Q8NDY8 209 aa8.43□□□□□ -1.06
XRN1-207ENST00000468894 ABHD4Q8TB40 342 aa8.43□□□□□ -1.06
XRN1-207ENST00000468894 PPP1R1BQ9UD71 204 aaPredicted RBP8.43□□□□□ -1.06
XRN1-207ENST00000468894 ITGAVP06756 1048 aa8.42□□□□□ -1.06
XRN1-207ENST00000468894 NOP2P46087 812 aaKnown RBP8.42□□□□□ -1.06
XRN1-207ENST00000468894 RCSD1Q6JBY9 416 aa8.42□□□□□ -1.06
XRN1-207ENST00000468894 CEP128Q6ZU80 1094 aa8.42□□□□□ -1.06
XRN1-207ENST00000468894 CRACR2BQ8N4Y2 399 aaPredicted RBP8.42□□□□□ -1.06
XRN1-207ENST00000468894 RNF32Q9H0A6 362 aa8.42□□□□□ -1.06
XRN1-207ENST00000468894 TNFRSF10DQ9UBN6 386 aa8.42□□□□□ -1.06
XRN1-207ENST00000468894 NOP56O00567 594 aaKnown RBP8.41□□□□□ -1.06
XRN1-207ENST00000468894 GLI1P08151 1106 aa8.41□□□□□ -1.06
XRN1-207ENST00000468894 GTF2IRD2BQ6EKJ0 949 aa8.41□□□□□ -1.06
XRN1-207ENST00000468894 POMZP3Q6PJE2 187 aa8.41□□□□□ -1.06
XRN1-207ENST00000468894 SLCO6A1Q86UG4 719 aa8.41□□□□□ -1.06
XRN1-207ENST00000468894 GTF2IRD2Q86UP8 949 aa8.41□□□□□ -1.06
XRN1-207ENST00000468894 SPPL2CQ8IUH8 684 aa8.41□□□□□ -1.06
XRN1-207ENST00000468894 LILRA2Q8N149 483 aa8.41□□□□□ -1.06
XRN1-207ENST00000468894 NAT16Q8N8M0 369 aa8.41□□□□□ -1.06
XRN1-207ENST00000468894 BTN2A2Q8WVV5 523 aa8.41□□□□□ -1.06
XRN1-207ENST00000468894 SHISA4Q96DD7 197 aa8.41□□□□□ -1.06
XRN1-207ENST00000468894 EPN3Q9H201 632 aa8.41□□□□□ -1.06
XRN1-207ENST00000468894 BACE2Q9Y5Z0 518 aa8.41□□□□□ -1.06
XRN1-207ENST00000468894 ZNF503-AS2A6NEH8 195 aa8.4□□□□□ -1.06
XRN1-207ENST00000468894 U2SURPO15042 1029 aaKnown RBP8.4□□□□□ -1.06
XRN1-207ENST00000468894 NRDCO43847 1150 aa8.4□□□□□ -1.06
XRN1-207ENST00000468894 PSPNO60542 156 aa8.4□□□□□ -1.06
XRN1-207ENST00000468894 CYP2R1Q6VVX0 501 aa8.4□□□□□ -1.06
XRN1-207ENST00000468894 ASIC4Q96FT7 647 aa8.4□□□□□ -1.06
XRN1-207ENST00000468894 PTCHD1Q96NR3 888 aa8.4□□□□□ -1.06
XRN1-207ENST00000468894 DNAJC2Q99543 621 aaKnown RBP8.4□□□□□ -1.06
XRN1-207ENST00000468894 PLCD4Q9BRC7 762 aa8.4□□□□□ -1.06
XRN1-207ENST00000468894 GPR160Q9UJ42 338 aa8.4□□□□□ -1.06
XRN1-207ENST00000468894 RTP1P59025 263 aa8.39□□□□□ -1.07
XRN1-207ENST00000468894 CYP4F3Q08477 520 aa8.39□□□□□ -1.07
XRN1-207ENST00000468894 HSF5Q4G112 596 aaPredicted RBP8.39□□□□□ -1.07
XRN1-207ENST00000468894 TMEM67Q5HYA8 995 aa8.39□□□□□ -1.07
XRN1-207ENST00000468894 EEF1DP3Q658K8 133 aa8.39□□□□□ -1.07
XRN1-207ENST00000468894 NLRX1Q86UT6 975 aa8.39□□□□□ -1.07
XRN1-207ENST00000468894 ST13P5Q8NFI4 369 aaPredicted RBP8.39□□□□□ -1.07
XRN1-207ENST00000468894 NKX2-4Q9H2Z4 354 aa8.39□□□□□ -1.07
XRN1-207ENST00000468894 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.39□□□□□ -1.07
XRN1-207ENST00000468894 SIRPGQ9P1W8 387 aa8.39□□□□□ -1.07
XRN1-207ENST00000468894 LRP2BPQ9P2M1 347 aa8.39□□□□□ -1.07
XRN1-207ENST00000468894 C2orf71A6NGG8 1288 aa8.38□□□□□ -1.07
XRN1-207ENST00000468894 CAPNS1P04632 268 aa8.38□□□□□ -1.07
XRN1-207ENST00000468894 GALK1P51570 392 aa8.38□□□□□ -1.07
XRN1-207ENST00000468894 SCRN1Q12765 414 aa8.38□□□□□ -1.07
XRN1-207ENST00000468894 KIR3DS1Q14943 382 aa8.38□□□□□ -1.07
XRN1-207ENST00000468894 SLC14A2Q15849 920 aa8.38□□□□□ -1.07
XRN1-207ENST00000468894 COPS5Q92905 334 aa8.38□□□□□ -1.07
XRN1-207ENST00000468894 LIN37Q96GY3 246 aaPredicted RBP8.38□□□□□ -1.07
XRN1-207ENST00000468894 JMJD8Q96S16 334 aa8.38□□□□□ -1.07
XRN1-207ENST00000468894 A0A1W2PQ45 241 aaPredicted RBP8.37□□□□□ -1.07
XRN1-207ENST00000468894 A0A1W2PQU0 124 aa8.37□□□□□ -1.07
XRN1-207ENST00000468894 A0A1W2PQY0 241 aa8.37□□□□□ -1.07
XRN1-207ENST00000468894 CCDC85CA6NKD9 419 aa8.37□□□□□ -1.07
XRN1-207ENST00000468894 SEPHS1P49903 392 aa8.37□□□□□ -1.07
XRN1-207ENST00000468894 RASA3Q14644 834 aa8.37□□□□□ -1.07
XRN1-207ENST00000468894 KSR1Q8IVT5 923 aa8.37□□□□□ -1.07
XRN1-207ENST00000468894 PMFBP1Q8TBY8 1022 aa8.37□□□□□ -1.07
XRN1-207ENST00000468894 DRC1Q96MC2 740 aa8.37□□□□□ -1.07
XRN1-207ENST00000468894 TAF6LQ9Y6J9 622 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms