RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 SUGT1Q9Y2Z0 365 aa6.26□□□□□ -1.41
GPNMB-207ENST00000468723 SF3B6Q9Y3B4 125 aaKnown RBP6.26□□□□□ -1.41
GPNMB-207ENST00000468723 LOC105371045A0A1W2PR82 267 aa6.25□□□□□ -1.41
GPNMB-207ENST00000468723 FADS2P1A8MWK0 482 aa6.25□□□□□ -1.41
GPNMB-207ENST00000468723 C8AP07357 584 aa6.25□□□□□ -1.41
GPNMB-207ENST00000468723 IFNGR1P15260 489 aa6.25□□□□□ -1.41
GPNMB-207ENST00000468723 PDE6BP35913 854 aa6.25□□□□□ -1.41
GPNMB-207ENST00000468723 KIR2DL1P43626 348 aaPredicted RBP6.25□□□□□ -1.41
GPNMB-207ENST00000468723 KIR2DL2P43627 348 aaPredicted RBP6.25□□□□□ -1.41
GPNMB-207ENST00000468723 MESP2Q0VG99 397 aa6.25□□□□□ -1.41
GPNMB-207ENST00000468723 DPY19L1Q2PZI1 675 aa6.25□□□□□ -1.41
GPNMB-207ENST00000468723 KSR1Q8IVT5 923 aa6.25□□□□□ -1.41
GPNMB-207ENST00000468723 NAT16Q8N8M0 369 aa6.25□□□□□ -1.41
GPNMB-207ENST00000468723 SHISA4Q96DD7 197 aa6.25□□□□□ -1.41
GPNMB-207ENST00000468723 FCRL3Q96P31 734 aaPredicted RBP6.25□□□□□ -1.41
GPNMB-207ENST00000468723 PLCD4Q9BRC7 762 aa6.25□□□□□ -1.41
GPNMB-207ENST00000468723 GBP3Q9H0R5 595 aa6.25□□□□□ -1.41
GPNMB-207ENST00000468723 CWC22Q9HCG8 908 aaKnown RBP6.25□□□□□ -1.41
GPNMB-207ENST00000468723 DCP1AQ9NPI6 582 aaPredicted RBP6.25□□□□□ -1.41
GPNMB-207ENST00000468723 YBX2Q9Y2T7 364 aaKnown RBP6.25□□□□□ -1.41
GPNMB-207ENST00000468723 NRDCO43847 1150 aa6.24□□□□□ -1.41
GPNMB-207ENST00000468723 PPM1BO75688 479 aa6.24□□□□□ -1.41
GPNMB-207ENST00000468723 NOP2P46087 812 aaKnown RBP6.24□□□□□ -1.41
GPNMB-207ENST00000468723 POU4F1Q01851 419 aa6.24□□□□□ -1.41
GPNMB-207ENST00000468723 SYDE1Q6ZW31 735 aaPredicted RBP6.24□□□□□ -1.41
GPNMB-207ENST00000468723 MCF2L2Q86YR7 1114 aa6.24□□□□□ -1.41
GPNMB-207ENST00000468723 TMEM52Q8NDY8 209 aa6.24□□□□□ -1.41
GPNMB-207ENST00000468723 PPP1R14AQ96A00 147 aa6.24□□□□□ -1.41
GPNMB-207ENST00000468723 INTS4Q96HW7 963 aaKnown RBP6.24□□□□□ -1.41
GPNMB-207ENST00000468723 FAM84AQ96KN4 292 aa6.24□□□□□ -1.41
GPNMB-207ENST00000468723 SLC38A3Q99624 504 aa6.24□□□□□ -1.41
GPNMB-207ENST00000468723 SLC6A17Q9H1V8 727 aa6.24□□□□□ -1.41
GPNMB-207ENST00000468723 EPB41L4BQ9H329 900 aa6.24□□□□□ -1.41
GPNMB-207ENST00000468723 ZNF408Q9H9D4 720 aa6.24□□□□□ -1.41
GPNMB-207ENST00000468723 ACTR10Q9NZ32 417 aa6.24□□□□□ -1.41
GPNMB-207ENST00000468723 TNFRSF10DQ9UBN6 386 aa6.24□□□□□ -1.41
GPNMB-207ENST00000468723 SUSD2Q9UGT4 822 aa6.24□□□□□ -1.41
GPNMB-207ENST00000468723 DIS3Q9Y2L1 958 aaKnown RBP6.24□□□□□ -1.41
GPNMB-207ENST00000468723 A0A087WZG4 1122 aa6.23□□□□□ -1.41
GPNMB-207ENST00000468723 B2RBV5 119 aa6.23□□□□□ -1.41
GPNMB-207ENST00000468723 FGRP09769 529 aa6.23□□□□□ -1.41
GPNMB-207ENST00000468723 ENDOUP21128 410 aaKnown RBP6.23□□□□□ -1.41
GPNMB-207ENST00000468723 SDHBP21912 280 aa6.23□□□□□ -1.41
GPNMB-207ENST00000468723 CEBPAP49715 358 aaPredicted RBP6.23□□□□□ -1.41
GPNMB-207ENST00000468723 SNX17Q15036 470 aa6.23□□□□□ -1.41
GPNMB-207ENST00000468723 HSF5Q4G112 596 aaPredicted RBP6.23□□□□□ -1.41
GPNMB-207ENST00000468723 C6orf15Q6UXA7 325 aaPredicted RBP6.23□□□□□ -1.41
GPNMB-207ENST00000468723 ZNF605Q86T29 641 aa6.23□□□□□ -1.41
GPNMB-207ENST00000468723 NLRX1Q86UT6 975 aa6.23□□□□□ -1.41
GPNMB-207ENST00000468723 MCMBPQ9BTE3 642 aa6.23□□□□□ -1.41
GPNMB-207ENST00000468723 LGR4Q9BXB1 951 aa6.23□□□□□ -1.41
GPNMB-207ENST00000468723 APEX2Q9UBZ4 518 aa6.23□□□□□ -1.41
GPNMB-207ENST00000468723 CGGBP1Q9UFW8 167 aaPredicted RBP6.23□□□□□ -1.41
GPNMB-207ENST00000468723 PRKAG3Q9UGI9 489 aa6.23□□□□□ -1.41
GPNMB-207ENST00000468723 ANKRD34BA5PLL1 514 aa6.22□□□□□ -1.41
GPNMB-207ENST00000468723 BTBD11A6QL63 1104 aa6.22□□□□□ -1.41
GPNMB-207ENST00000468723 STXBP3O00186 592 aa6.22□□□□□ -1.41
GPNMB-207ENST00000468723 DDAH1O94760 285 aa6.22□□□□□ -1.41
GPNMB-207ENST00000468723 TNNI3KQ59H18 835 aa6.22□□□□□ -1.41
GPNMB-207ENST00000468723 ADGRF1Q5T601 910 aa6.22□□□□□ -1.41
GPNMB-207ENST00000468723 GALNT18Q6P9A2 607 aa6.22□□□□□ -1.41
GPNMB-207ENST00000468723 SLCO6A1Q86UG4 719 aa6.22□□□□□ -1.41
GPNMB-207ENST00000468723 KRTAP19-1Q8IUB9 90 aa6.22□□□□□ -1.41
GPNMB-207ENST00000468723 FBXO15Q8NCQ5 510 aaPredicted RBP6.22□□□□□ -1.41
GPNMB-207ENST00000468723 MICAL1Q8TDZ2 1067 aa6.22□□□□□ -1.41
GPNMB-207ENST00000468723 JMJD8Q96S16 334 aa6.22□□□□□ -1.41
GPNMB-207ENST00000468723 APBA2Q99767 749 aa6.22□□□□□ -1.41
GPNMB-207ENST00000468723 AKT3Q9Y243 479 aa6.22□□□□□ -1.41
GPNMB-207ENST00000468723 TAF6LQ9Y6J9 622 aa6.22□□□□□ -1.41
GPNMB-207ENST00000468723 WTIPA6NIX2 430 aaPredicted RBP6.21□□□□□ -1.42
GPNMB-207ENST00000468723 FGF10O15520 208 aaPredicted RBP6.21□□□□□ -1.42
GPNMB-207ENST00000468723 PRKCAP17252 672 aa6.21□□□□□ -1.42
GPNMB-207ENST00000468723 JAMLQ86YT9 394 aa6.21□□□□□ -1.42
GPNMB-207ENST00000468723 FAM178BQ8IXR5 827 aa6.21□□□□□ -1.42
GPNMB-207ENST00000468723 ARHGEF39Q8N4T4 335 aa6.21□□□□□ -1.42
GPNMB-207ENST00000468723 SLC43A3Q8NBI5 491 aa6.21□□□□□ -1.42
GPNMB-207ENST00000468723 NUP43Q8NFH3 380 aa6.21□□□□□ -1.42
GPNMB-207ENST00000468723 IMPACTQ9P2X3 320 aa6.21□□□□□ -1.42
GPNMB-207ENST00000468723 A0A1W2PQ27 194 aa6.2□□□□□ -1.42
GPNMB-207ENST00000468723 A0A1W2PQ45 241 aaPredicted RBP6.2□□□□□ -1.42
GPNMB-207ENST00000468723 A0A1W2PQ64 194 aa6.2□□□□□ -1.42
GPNMB-207ENST00000468723 A0A1W2PQC6 194 aa6.2□□□□□ -1.42
GPNMB-207ENST00000468723 A0A1W2PQD8 194 aa6.2□□□□□ -1.42
GPNMB-207ENST00000468723 A0A1W2PQY0 241 aa6.2□□□□□ -1.42
GPNMB-207ENST00000468723 KCNH1O95259 989 aa6.2□□□□□ -1.42
GPNMB-207ENST00000468723 YBX3P16989 372 aaKnown RBP eCLIP6.2□□□□□ -1.42
GPNMB-207ENST00000468723 AMPD2Q01433 879 aa6.2□□□□□ -1.42
GPNMB-207ENST00000468723 NCAPHQ15003 741 aa6.2□□□□□ -1.42
GPNMB-207ENST00000468723 PKN1Q16512 942 aa6.2□□□□□ -1.42
GPNMB-207ENST00000468723 HLA-DQA1Q5Y7H0 255 aa6.2□□□□□ -1.42
GPNMB-207ENST00000468723 IRF2BP1Q8IU81 584 aa6.2□□□□□ -1.42
GPNMB-207ENST00000468723 ZNF513Q8N8E2 541 aaPredicted RBP6.2□□□□□ -1.42
GPNMB-207ENST00000468723 HNRNPLLQ8WVV9 542 aaKnown RBP6.2□□□□□ -1.42
GPNMB-207ENST00000468723 PTCHD1Q96NR3 888 aa6.2□□□□□ -1.42
GPNMB-207ENST00000468723 ST7Q9NRC1 585 aa6.2□□□□□ -1.42
GPNMB-207ENST00000468723 OR14I1A6ND48 311 aa6.19□□□□□ -1.42
GPNMB-207ENST00000468723 AURKAO14965 403 aa6.19□□□□□ -1.42
GPNMB-207ENST00000468723 PNLIPP16233 465 aa6.19□□□□□ -1.42
GPNMB-207ENST00000468723 CYP4F8P98187 520 aa6.19□□□□□ -1.42
GPNMB-207ENST00000468723 FXNQ16595 210 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms