RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 MCM7P33993 719 aa21.45■■□□□ 1.02
CHRNA4-203ENST00000467563 ATP2C1P98194 919 aaPredicted RBP21.45■■□□□ 1.02
CHRNA4-203ENST00000467563 QRICH1Q2TAL8 776 aa21.45■■□□□ 1.02
CHRNA4-203ENST00000467563 NBPF12Q5TAG4 269 aaPredicted RBP21.45■■□□□ 1.02
CHRNA4-203ENST00000467563 ZNF579Q8NAF0 562 aaKnown RBP21.45■■□□□ 1.02
CHRNA4-203ENST00000467563 GLIS2Q9BZE0 524 aaPredicted RBP21.45■■□□□ 1.02
CHRNA4-203ENST00000467563 RNF181Q9P0P0 153 aa21.45■■□□□ 1.02
CHRNA4-203ENST00000467563 SYKP43405 635 aa21.44■■□□□ 1.02
CHRNA4-203ENST00000467563 HIRAP54198 1017 aaPredicted RBP21.44■■□□□ 1.02
CHRNA4-203ENST00000467563 TYRO3Q06418 890 aa21.44■■□□□ 1.02
CHRNA4-203ENST00000467563 CSRNP2Q9H175 543 aa21.44■■□□□ 1.02
CHRNA4-203ENST00000467563 DDNO94850 711 aaPredicted RBP21.44■■□□□ 1.02
CHRNA4-203ENST00000467563 ADCY7P51828 1080 aa21.44■■□□□ 1.02
CHRNA4-203ENST00000467563 CDC37Q16543 378 aaPredicted RBP21.44■■□□□ 1.02
CHRNA4-203ENST00000467563 PPP1R18Q6NYC8 613 aa21.44■■□□□ 1.02
CHRNA4-203ENST00000467563 KRT25Q7Z3Z0 450 aa21.44■■□□□ 1.02
CHRNA4-203ENST00000467563 REXO1Q8N1G1 1221 aaKnown RBP21.44■■□□□ 1.02
CHRNA4-203ENST00000467563 SDF4Q9BRK5 362 aa21.44■■□□□ 1.02
CHRNA4-203ENST00000467563 BIN2Q9UBW5 565 aaPredicted RBP21.44■■□□□ 1.02
CHRNA4-203ENST00000467563 BTNL9Q6UXG8 535 aa21.43■■□□□ 1.02
CHRNA4-203ENST00000467563 GOPCQ9HD26 462 aa21.43■■□□□ 1.02
CHRNA4-203ENST00000467563 TMEM260Q9NX78 707 aa21.43■■□□□ 1.02
CHRNA4-203ENST00000467563 KCNH3Q9ULD8 1083 aa21.43■■□□□ 1.02
CHRNA4-203ENST00000467563 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.43■■□□□ 1.02
CHRNA4-203ENST00000467563 SNAP25P60880 206 aa21.43■■□□□ 1.02
CHRNA4-203ENST00000467563 SYDE2Q5VT97 1194 aa21.43■■□□□ 1.02
CHRNA4-203ENST00000467563 JAKMIP3Q5VZ66 844 aa21.43■■□□□ 1.02
CHRNA4-203ENST00000467563 USP49Q70CQ1 688 aa21.43■■□□□ 1.02
CHRNA4-203ENST00000467563 APOBEC3FQ8IUX4 373 aaKnown RBP21.43■■□□□ 1.02
CHRNA4-203ENST00000467563 C4orf32Q8N8J7 132 aa21.43■■□□□ 1.02
CHRNA4-203ENST00000467563 ERCC4Q92889 916 aaPredicted RBP21.43■■□□□ 1.02
CHRNA4-203ENST00000467563 GGA3Q9NZ52 723 aa21.43■■□□□ 1.02
CHRNA4-203ENST00000467563 IKQ13123 557 aaPredicted RBP21.42■■□□□ 1.02
CHRNA4-203ENST00000467563 NONOQ15233 471 aaKnown RBP eCLIP21.42■■□□□ 1.02
CHRNA4-203ENST00000467563 ZYXQ15942 572 aaKnown RBP21.42■■□□□ 1.02
CHRNA4-203ENST00000467563 PRAMEF18Q5VWM3 479 aa21.42■■□□□ 1.02
CHRNA4-203ENST00000467563 FERMT2Q96AC1 680 aa21.42■■□□□ 1.02
CHRNA4-203ENST00000467563 VCPKMTQ9H867 229 aa21.42■■□□□ 1.02
CHRNA4-203ENST00000467563 RIC8AQ9NPQ8 531 aa21.42■■□□□ 1.02
CHRNA4-203ENST00000467563 FAM83BQ5T0W9 1011 aa21.41■■□□□ 1.02
CHRNA4-203ENST00000467563 TIGD1Q96MW7 591 aa21.41■■□□□ 1.02
CHRNA4-203ENST00000467563 SASS6Q6UVJ0 657 aa21.41■■□□□ 1.02
CHRNA4-203ENST00000467563 PCDHA1Q9Y5I3 950 aa21.41■■□□□ 1.02
CHRNA4-203ENST00000467563 IL17AQ16552 155 aa21.4■■□□□ 1.02
CHRNA4-203ENST00000467563 C9orf131Q5VYM1 1079 aa21.4■■□□□ 1.02
CHRNA4-203ENST00000467563 SH2D4AQ9H788 454 aa21.4■■□□□ 1.02
CHRNA4-203ENST00000467563 FAM13BQ9NYF5 915 aa21.4■■□□□ 1.02
CHRNA4-203ENST00000467563 VWA3AA6NCI4 1184 aa21.4■■□□□ 1.02
CHRNA4-203ENST00000467563 CTNND1O60716 968 aaKnown RBP21.4■■□□□ 1.02
CHRNA4-203ENST00000467563 INPP5BP32019 993 aa21.4■■□□□ 1.02
CHRNA4-203ENST00000467563 STAT2P52630 851 aa21.4■■□□□ 1.02
CHRNA4-203ENST00000467563 UBE2SQ16763 222 aa21.4■■□□□ 1.02
CHRNA4-203ENST00000467563 LONRF3Q496Y0 759 aa21.4■■□□□ 1.02
CHRNA4-203ENST00000467563 TBCKQ8TEA7 893 aa21.4■■□□□ 1.02
CHRNA4-203ENST00000467563 ZNF341Q9BYN7 854 aa21.4■■□□□ 1.02
CHRNA4-203ENST00000467563 PRR12Q9ULL5 1215 aa21.4■■□□□ 1.02
CHRNA4-203ENST00000467563 ATAD5Q96QE3 1844 aa21.4■■□□□ 1.02
CHRNA4-203ENST00000467563 CLK2P49760 499 aaKnown RBP21.39■■□□□ 1.01
CHRNA4-203ENST00000467563 CUL5Q93034 780 aa21.39■■□□□ 1.01
CHRNA4-203ENST00000467563 EPSTI1Q96J88 318 aa21.39■■□□□ 1.01
CHRNA4-203ENST00000467563 TMEM60Q9H2L4 133 aa21.39■■□□□ 1.01
CHRNA4-203ENST00000467563 PSTPIP2Q9H939 334 aa21.39■■□□□ 1.01
CHRNA4-203ENST00000467563 LETM2Q2VYF4 491 aa21.38■■□□□ 1.01
CHRNA4-203ENST00000467563 ANO6Q4KMQ2 910 aa21.38■■□□□ 1.01
CHRNA4-203ENST00000467563 ARL6IP4Q66PJ3 421 aaKnown RBP21.38■■□□□ 1.01
CHRNA4-203ENST00000467563 NEK8Q86SG6 692 aa21.38■■□□□ 1.01
CHRNA4-203ENST00000467563 MRPL12P52815 198 aaKnown RBP21.38■■□□□ 1.01
CHRNA4-203ENST00000467563 DCAF15Q66K64 600 aa21.38■■□□□ 1.01
CHRNA4-203ENST00000467563 KRBA2Q6ZNG9 492 aa21.38■■□□□ 1.01
CHRNA4-203ENST00000467563 SYMPKQ92797 1274 aaKnown RBP21.38■■□□□ 1.01
CHRNA4-203ENST00000467563 AMNQ9BXJ7 453 aa21.38■■□□□ 1.01
CHRNA4-203ENST00000467563 KIAA1468Q9P260 1216 aa21.38■■□□□ 1.01
CHRNA4-203ENST00000467563 FZD1Q9UP38 647 aa21.38■■□□□ 1.01
CHRNA4-203ENST00000467563 A0A087WWV3 80 aa21.37■■□□□ 1.01
CHRNA4-203ENST00000467563 POLR2DO15514 142 aaKnown RBP21.37■■□□□ 1.01
CHRNA4-203ENST00000467563 GINM1Q9NU53 330 aa21.37■■□□□ 1.01
CHRNA4-203ENST00000467563 EDIL3O43854 480 aa21.36■■□□□ 1.01
CHRNA4-203ENST00000467563 CCNT1O60563 726 aaKnown RBP21.36■■□□□ 1.01
CHRNA4-203ENST00000467563 TAL1P17542 331 aaPredicted RBP21.36■■□□□ 1.01
CHRNA4-203ENST00000467563 FBXO11Q86XK2 927 aa21.36■■□□□ 1.01
CHRNA4-203ENST00000467563 FEZ1Q99689 392 aa21.36■■□□□ 1.01
CHRNA4-203ENST00000467563 ZNF112Q9UJU3 913 aa21.36■■□□□ 1.01
CHRNA4-203ENST00000467563 A0A087X0B3 334 aa21.36■■□□□ 1.01
CHRNA4-203ENST00000467563 USH1GQ495M9 461 aa21.36■■□□□ 1.01
CHRNA4-203ENST00000467563 PDILTQ8N807 584 aa21.36■■□□□ 1.01
CHRNA4-203ENST00000467563 CNNM3Q8NE01 707 aa21.36■■□□□ 1.01
CHRNA4-203ENST00000467563 DNAJC25Q9H1X3 360 aa21.36■■□□□ 1.01
CHRNA4-203ENST00000467563 USP17L15C9J2P7 530 aa21.35■■□□□ 1.01
CHRNA4-203ENST00000467563 USP17L13C9JLJ4 530 aa21.35■■□□□ 1.01
CHRNA4-203ENST00000467563 USP17L11C9JVI0 530 aa21.35■■□□□ 1.01
CHRNA4-203ENST00000467563 USP17L18D6R9N7 530 aa21.35■■□□□ 1.01
CHRNA4-203ENST00000467563 USP17L22D6RA61 530 aa21.35■■□□□ 1.01
CHRNA4-203ENST00000467563 USP17L17D6RBQ6 530 aa21.35■■□□□ 1.01
CHRNA4-203ENST00000467563 USP17L19D6RCP7 530 aa21.35■■□□□ 1.01
CHRNA4-203ENST00000467563 USP17L20D6RJB6 530 aa21.35■■□□□ 1.01
CHRNA4-203ENST00000467563 LMOD1P29536 600 aaPredicted RBP21.35■■□□□ 1.01
CHRNA4-203ENST00000467563 USP17L24Q0WX57 530 aa21.35■■□□□ 1.01
CHRNA4-203ENST00000467563 USP17L6PQ6QN14 398 aa21.35■■□□□ 1.01
CHRNA4-203ENST00000467563 FAM200AQ8TCP9 573 aa21.35■■□□□ 1.01
CHRNA4-203ENST00000467563 ADARB2Q9NS39 739 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms