RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 AKT3Q9Y243 479 aa6.3□□□□□ -1.4
CLK1-208ENST00000464454 TMEM82A0PJX8 343 aa6.29□□□□□ -1.4
CLK1-208ENST00000464454 HPXP02790 462 aa6.29□□□□□ -1.4
CLK1-208ENST00000464454 CD3EP07766 207 aa6.29□□□□□ -1.4
CLK1-208ENST00000464454 KIR2DL1P43626 348 aaPredicted RBP6.29□□□□□ -1.4
CLK1-208ENST00000464454 KIR2DL2P43627 348 aaPredicted RBP6.29□□□□□ -1.4
CLK1-208ENST00000464454 AMPD2Q01433 879 aa6.29□□□□□ -1.4
CLK1-208ENST00000464454 CYP2R1Q6VVX0 501 aa6.29□□□□□ -1.4
CLK1-208ENST00000464454 LILRA2Q8N149 483 aa6.29□□□□□ -1.4
CLK1-208ENST00000464454 CELF2-AS1Q8N7Q2 184 aa6.29□□□□□ -1.4
CLK1-208ENST00000464454 MICAL1Q8TDZ2 1067 aa6.29□□□□□ -1.4
CLK1-208ENST00000464454 LINC01599Q8WXQ3 324 aa6.29□□□□□ -1.4
CLK1-208ENST00000464454 PPP1R14AQ96A00 147 aa6.29□□□□□ -1.4
CLK1-208ENST00000464454 MAP6Q96JE9 813 aa6.29□□□□□ -1.4
CLK1-208ENST00000464454 FMNL2Q96PY5 1086 aa6.29□□□□□ -1.4
CLK1-208ENST00000464454 SLC12A9Q9BXP2 914 aa6.29□□□□□ -1.4
CLK1-208ENST00000464454 ST7Q9NRC1 585 aa6.29□□□□□ -1.4
CLK1-208ENST00000464454 C19orf73Q9NVV2 129 aa6.29□□□□□ -1.4
CLK1-208ENST00000464454 SIRPGQ9P1W8 387 aa6.29□□□□□ -1.4
CLK1-208ENST00000464454 TNFRSF10DQ9UBN6 386 aa6.29□□□□□ -1.4
CLK1-208ENST00000464454 GSTM1P09488 218 aa6.28□□□□□ -1.4
CLK1-208ENST00000464454 TAL1P17542 331 aaPredicted RBP6.28□□□□□ -1.4
CLK1-208ENST00000464454 RBM10P98175 930 aaKnown RBP6.28□□□□□ -1.4
CLK1-208ENST00000464454 NR0B2Q15466 257 aa6.28□□□□□ -1.4
CLK1-208ENST00000464454 SV2CQ496J9 727 aa6.28□□□□□ -1.4
CLK1-208ENST00000464454 NAT16Q8N8M0 369 aa6.28□□□□□ -1.4
CLK1-208ENST00000464454 MYLIPQ8WY64 445 aa6.28□□□□□ -1.4
CLK1-208ENST00000464454 ASIC4Q96FT7 647 aa6.28□□□□□ -1.4
CLK1-208ENST00000464454 LRP2BPQ9P2M1 347 aa6.28□□□□□ -1.4
CLK1-208ENST00000464454 APEX2Q9UBZ4 518 aa6.28□□□□□ -1.4
CLK1-208ENST00000464454 EMC9Q9Y3B6 208 aa6.28□□□□□ -1.4
CLK1-208ENST00000464454 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
CLK1-208ENST00000464454 PAPLNO95428 1278 aa6.27□□□□□ -1.41
CLK1-208ENST00000464454 KCNMB1Q16558 191 aa6.27□□□□□ -1.41
CLK1-208ENST00000464454 RTP2Q5QGT7 225 aa6.27□□□□□ -1.41
CLK1-208ENST00000464454 EEF1DP3Q658K8 133 aa6.27□□□□□ -1.41
CLK1-208ENST00000464454 MRM1Q6IN84 353 aaKnown RBP6.27□□□□□ -1.41
CLK1-208ENST00000464454 ZSWIM9Q86XI8 627 aa6.27□□□□□ -1.41
CLK1-208ENST00000464454 ZNF513Q8N8E2 541 aaPredicted RBP6.27□□□□□ -1.41
CLK1-208ENST00000464454 ST13P5Q8NFI4 369 aaPredicted RBP6.27□□□□□ -1.41
CLK1-208ENST00000464454 ABHD4Q8TB40 342 aa6.27□□□□□ -1.41
CLK1-208ENST00000464454 KIRREL1Q96J84 757 aa6.27□□□□□ -1.41
CLK1-208ENST00000464454 G6PC3Q9BUM1 346 aa6.27□□□□□ -1.41
CLK1-208ENST00000464454 AP5S1Q9NUS5 200 aa6.27□□□□□ -1.41
CLK1-208ENST00000464454 ERVK13-1Q9NX77 482 aa6.27□□□□□ -1.41
CLK1-208ENST00000464454 IQCA1LA6NCM1 817 aa6.26□□□□□ -1.41
CLK1-208ENST00000464454 AURKAO14965 403 aa6.26□□□□□ -1.41
CLK1-208ENST00000464454 SNX17Q15036 470 aa6.26□□□□□ -1.41
CLK1-208ENST00000464454 SLC14A2Q15849 920 aa6.26□□□□□ -1.41
CLK1-208ENST00000464454 SLC10A6Q3KNW5 377 aa6.26□□□□□ -1.41
CLK1-208ENST00000464454 RCSD1Q6JBY9 416 aa6.26□□□□□ -1.41
CLK1-208ENST00000464454 DPH6Q7L8W6 267 aa6.26□□□□□ -1.41
CLK1-208ENST00000464454 KSR1Q8IVT5 923 aa6.26□□□□□ -1.41
CLK1-208ENST00000464454 TRIM59Q8IWR1 403 aa6.26□□□□□ -1.41
CLK1-208ENST00000464454 PMFBP1Q8TBY8 1022 aa6.26□□□□□ -1.41
CLK1-208ENST00000464454 ZNF669Q96BR6 464 aaPredicted RBP6.26□□□□□ -1.41
CLK1-208ENST00000464454 FCRL3Q96P31 734 aaPredicted RBP6.26□□□□□ -1.41
CLK1-208ENST00000464454 LNPKQ9C0E8 428 aa6.26□□□□□ -1.41
CLK1-208ENST00000464454 MSRB2Q9Y3D2 182 aa6.26□□□□□ -1.41
CLK1-208ENST00000464454 BACE2Q9Y5Z0 518 aa6.26□□□□□ -1.41
CLK1-208ENST00000464454 SHROOM4Q9ULL8 1493 aa6.26□□□□□ -1.41
CLK1-208ENST00000464454 TRBV23OR9-2A0A075B6M9 112 aa6.25□□□□□ -1.41
CLK1-208ENST00000464454 FGF10O15520 208 aaPredicted RBP6.25□□□□□ -1.41
CLK1-208ENST00000464454 USP2O75604 605 aaPredicted RBP6.25□□□□□ -1.41
CLK1-208ENST00000464454 KCNH1O95259 989 aa6.25□□□□□ -1.41
CLK1-208ENST00000464454 TBC1D8O95759 1140 aa6.25□□□□□ -1.41
CLK1-208ENST00000464454 GLI1P08151 1106 aa6.25□□□□□ -1.41
CLK1-208ENST00000464454 SEPHS1P49903 392 aa6.25□□□□□ -1.41
CLK1-208ENST00000464454 TMEM67Q5HYA8 995 aa6.25□□□□□ -1.41
CLK1-208ENST00000464454 HLA-DQA1Q5Y7H0 255 aa6.25□□□□□ -1.41
CLK1-208ENST00000464454 CEP128Q6ZU80 1094 aa6.25□□□□□ -1.41
CLK1-208ENST00000464454 LRP10Q7Z4F1 713 aa6.25□□□□□ -1.41
CLK1-208ENST00000464454 ZNF227Q86WZ6 799 aa6.25□□□□□ -1.41
CLK1-208ENST00000464454 FAM168AQ92567 244 aa6.25□□□□□ -1.41
CLK1-208ENST00000464454 SGSM3Q96HU1 749 aa6.25□□□□□ -1.41
CLK1-208ENST00000464454 HHIPL1Q96JK4 782 aa6.25□□□□□ -1.41
CLK1-208ENST00000464454 CCDC113Q9H0I3 377 aa6.25□□□□□ -1.41
CLK1-208ENST00000464454 CWC22Q9HCG8 908 aaKnown RBP6.25□□□□□ -1.41
CLK1-208ENST00000464454 A0A1W2PQ45 241 aaPredicted RBP6.24□□□□□ -1.41
CLK1-208ENST00000464454 A0A1W2PQY0 241 aa6.24□□□□□ -1.41
CLK1-208ENST00000464454 WTIPA6NIX2 430 aaPredicted RBP6.24□□□□□ -1.41
CLK1-208ENST00000464454 STXBP3O00186 592 aa6.24□□□□□ -1.41
CLK1-208ENST00000464454 PDPK1O15530 556 aa6.24□□□□□ -1.41
CLK1-208ENST00000464454 NRDCO43847 1150 aa6.24□□□□□ -1.41
CLK1-208ENST00000464454 VAMP4O75379 141 aa6.24□□□□□ -1.41
CLK1-208ENST00000464454 IFNGR1P15260 489 aa6.24□□□□□ -1.41
CLK1-208ENST00000464454 RTP1P59025 263 aa6.24□□□□□ -1.41
CLK1-208ENST00000464454 SERINC3Q13530 473 aa6.24□□□□□ -1.41
CLK1-208ENST00000464454 DPY19L1Q2PZI1 675 aa6.24□□□□□ -1.41
CLK1-208ENST00000464454 GTF2IRD2BQ6EKJ0 949 aa6.24□□□□□ -1.41
CLK1-208ENST00000464454 GALNT18Q6P9A2 607 aa6.24□□□□□ -1.41
CLK1-208ENST00000464454 ZPBP2Q6X784 338 aa6.24□□□□□ -1.41
CLK1-208ENST00000464454 GTF2IRD2Q86UP8 949 aa6.24□□□□□ -1.41
CLK1-208ENST00000464454 MRGPRX3Q96LB0 322 aa6.24□□□□□ -1.41
CLK1-208ENST00000464454 CCDC140Q96MF4 163 aa6.24□□□□□ -1.41
CLK1-208ENST00000464454 PTCHD1Q96NR3 888 aa6.24□□□□□ -1.41
CLK1-208ENST00000464454 GPR55Q9Y2T6 319 aaPredicted RBP6.24□□□□□ -1.41
CLK1-208ENST00000464454 TAF6LQ9Y6J9 622 aa6.24□□□□□ -1.41
CLK1-208ENST00000464454 LOC105371045A0A1W2PR82 267 aa6.23□□□□□ -1.41
CLK1-208ENST00000464454 C2orf71A6NGG8 1288 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms