RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 SUSD5O60279 629 aa4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 GJB6O95452 261 aa4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 CD3EP07766 207 aa4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 GTF2F1P35269 517 aaKnown RBP eCLIP4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 RAB33AQ14088 237 aa4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 SNX17Q15036 470 aa4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 SF3A1Q15459 793 aaKnown RBP4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 SLC14A2Q15849 920 aa4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 DDR2Q16832 855 aa4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 POMZP3Q6PJE2 187 aa4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 CELF2-AS1Q8N7Q2 184 aa4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 HHIPL1Q96JK4 782 aa4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 ST7Q9NRC1 585 aa4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 ERVK13-1Q9NX77 482 aa4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 FAM53CQ9NYF3 392 aa4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 APEX2Q9UBZ4 518 aa4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 EMC9Q9Y3B6 208 aa4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 RNF114Q9Y508 228 aa4.74□□□□□ -1.65
SCARNA18-201ENST00000459004 A0A1W2PQ45 241 aaPredicted RBP4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 A0A1W2PQY0 241 aa4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 AURKAO14965 403 aa4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 NRDCO43847 1150 aa4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 USP2O75604 605 aaPredicted RBP4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 TRHRP34981 398 aaPredicted RBP4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 AMPD2Q01433 879 aa4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 RBL2Q08999 1139 aa4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 SV2CQ496J9 727 aa4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 NBPF6Q5VWK0 638 aa4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 CEP128Q6ZU80 1094 aa4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 EEPD1Q7L9B9 569 aa4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 NAT16Q8N8M0 369 aa4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 TMEM52Q8NDY8 209 aa4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 PPP1R14AQ96A00 147 aa4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 NBPF4Q96M43 638 aa4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 FMNL2Q96PY5 1086 aa4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 HIRIP3Q9BW71 556 aaPredicted RBP4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 TRIM55Q9BYV6 548 aa4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 EPN3Q9H201 632 aa4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 C19orf44Q9H6X5 657 aa4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 CWC22Q9HCG8 908 aaKnown RBP4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.73□□□□□ -1.65
SCARNA18-201ENST00000459004 ZNF503-AS2A6NEH8 195 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 WTIPA6NIX2 430 aaPredicted RBP4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 U2SURPO15042 1029 aaKnown RBP4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 FGF10O15520 208 aaPredicted RBP4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 PSPNO60542 156 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 KCNH1O95259 989 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 TBC1D8O95759 1140 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 IFNGR1P15260 489 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 RTP1P59025 263 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 DPY19L1Q2PZI1 675 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 TIGD5Q53EQ6 642 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 HLA-DQA1Q5Y7H0 255 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 MRM1Q6IN84 353 aaKnown RBP4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 RCSD1Q6JBY9 416 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 GALNT18Q6P9A2 607 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 CYP2R1Q6VVX0 501 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 TRIM59Q8IWR1 403 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 MRGPRX3Q96LB0 322 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 MCMBPQ9BTE3 642 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 LRP2BPQ9P2M1 347 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 GPR160Q9UJ42 338 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 GPR55Q9Y2T6 319 aaPredicted RBP4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 BACE2Q9Y5Z0 518 aa4.72□□□□□ -1.65
SCARNA18-201ENST00000459004 C2orf71A6NGG8 1288 aa4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 NOTOA8MTQ0 251 aa4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 AGRPO00253 132 aa4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 TXKP42681 527 aa4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 CEBPAP49715 358 aaPredicted RBP4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 HSF5Q4G112 596 aaPredicted RBP4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 SOGA3Q5TF21 947 aa4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 EEF1DP3Q658K8 133 aa4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 MPZL3Q6UWV2 235 aa4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 SLCO6A1Q86UG4 719 aa4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 NLRX1Q86UT6 975 aa4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 SREK1Q8WXA9 508 aaKnown RBP4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 SHISA4Q96DD7 197 aa4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 PTCHD1Q96NR3 888 aa4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 RNF32Q9H0A6 362 aa4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 SLC6A17Q9H1V8 727 aa4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 CRTAC1Q9NQ79 661 aa4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 SIRPGQ9P1W8 387 aa4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 YBX2Q9Y2T7 364 aaKnown RBP4.71□□□□□ -1.66
SCARNA18-201ENST00000459004 STXBP3O00186 592 aa4.7□□□□□ -1.66
SCARNA18-201ENST00000459004 ITGAVP06756 1048 aa4.7□□□□□ -1.66
SCARNA18-201ENST00000459004 PNLIPP16233 465 aa4.7□□□□□ -1.66
SCARNA18-201ENST00000459004 HOXC12P31275 282 aa4.7□□□□□ -1.66
SCARNA18-201ENST00000459004 SEPHS1P49903 392 aa4.7□□□□□ -1.66
SCARNA18-201ENST00000459004 GTF2IRD2BQ6EKJ0 949 aa4.7□□□□□ -1.66
SCARNA18-201ENST00000459004 GTF2IRD2Q86UP8 949 aa4.7□□□□□ -1.66
SCARNA18-201ENST00000459004 JAMLQ86YT9 394 aa4.7□□□□□ -1.66
SCARNA18-201ENST00000459004 KSR1Q8IVT5 923 aa4.7□□□□□ -1.66
SCARNA18-201ENST00000459004 ST13P5Q8NFI4 369 aaPredicted RBP4.7□□□□□ -1.66
SCARNA18-201ENST00000459004 COPS5Q92905 334 aa4.7□□□□□ -1.66
SCARNA18-201ENST00000459004 LIN37Q96GY3 246 aaPredicted RBP4.7□□□□□ -1.66
SCARNA18-201ENST00000459004 JMJD8Q96S16 334 aa4.7□□□□□ -1.66
SCARNA18-201ENST00000459004 CYP26B1Q9NR63 512 aa4.7□□□□□ -1.66
SCARNA18-201ENST00000459004 ACSL6Q9UKU0 697 aa4.7□□□□□ -1.66
SCARNA18-201ENST00000459004 TAF6LQ9Y6J9 622 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms