RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 PIK3R6Q5UE93 754 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 ELMSAN1Q6PJG2 1045 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 TMEM192Q8IY95 271 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 BVESQ8NE79 360 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 MYRIPQ8NFW9 859 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 PTPRN2Q92932 1015 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 CLIP3Q96DZ5 547 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 SCLYQ96I15 445 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 MAGEB10Q96LZ2 347 aaPredicted RBP4.83□□□□□ -1.64
PMS1-216ENST00000447734 MENTQ9BUN1 341 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.83□□□□□ -1.64
PMS1-216ENST00000447734 KLHL25Q9H0H3 589 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 SMG9Q9H0W8 520 aaKnown RBP4.83□□□□□ -1.64
PMS1-216ENST00000447734 SOX17Q9H6I2 414 aaPredicted RBP4.83□□□□□ -1.64
PMS1-216ENST00000447734 CASS4Q9NQ75 786 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 TPSG1Q9NRR2 321 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 PUF60Q9UHX1 559 aaKnown RBP4.83□□□□□ -1.64
PMS1-216ENST00000447734 ANAPC4Q9UJX5 808 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 FBXO9Q9UK97 447 aaPredicted RBP4.83□□□□□ -1.64
PMS1-216ENST00000447734 PNMA8BQ9ULN7 279 aaPredicted RBP4.83□□□□□ -1.64
PMS1-216ENST00000447734 CSADQ9Y600 493 aa4.83□□□□□ -1.64
PMS1-216ENST00000447734 BLACEA4D250 179 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 C9IYK1 514 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 M0R2C6 588 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 PIK3R2O00459 728 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 RGS13O14921 159 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 CBFA2T2O43439 604 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 CLEC3AO75596 197 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 PPM1BO75688 479 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 TCEA3O75764 348 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 ECEL1O95672 775 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 MT-CO1P00395 513 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 EPHA1P21709 976 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 HTR3AP46098 478 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 ARL4DP49703 201 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 SAFBQ15424 915 aaKnown RBP eCLIP4.82□□□□□ -1.64
PMS1-216ENST00000447734 SKOR2Q2VWA4 1001 aaPredicted RBP4.82□□□□□ -1.64
PMS1-216ENST00000447734 COBLL1Q53SF7 1204 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 FAM83BQ5T0W9 1011 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 ARTNQ5T4W7 220 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 ANO1Q5XXA6 986 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 DCAF15Q66K64 600 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 ERAP2Q6P179 960 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 MAMDC2Q7Z304 686 aaPredicted RBP4.82□□□□□ -1.64
PMS1-216ENST00000447734 MORC1Q86VD1 984 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 C12orf40Q86WS4 652 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 ANKLE2Q86XL3 938 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 CCDC144CPQ8IYA2 1237 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 SLFN12Q8IYM2 578 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 CRACR2BQ8N4Y2 399 aaPredicted RBP4.82□□□□□ -1.64
PMS1-216ENST00000447734 ENAHQ8N8S7 591 aaPredicted RBP4.82□□□□□ -1.64
PMS1-216ENST00000447734 KCTD13Q8WZ19 329 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 WNK4Q96J92 1243 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 ELAC2Q9BQ52 826 aaKnown RBP4.82□□□□□ -1.64
PMS1-216ENST00000447734 TMX4Q9H1E5 349 aaPredicted RBP4.82□□□□□ -1.64
PMS1-216ENST00000447734 PICK1Q9NRD5 415 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 SWAP70Q9UH65 585 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 FAM50BQ9Y247 325 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 ANKRD6Q9Y2G4 727 aa4.82□□□□□ -1.64
PMS1-216ENST00000447734 TCRBV16S1A1N1A0A5B0 115 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 ANO9A1A5B4 782 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 SPDYE3A6NKU9 549 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 DYRK3O43781 588 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 ZNF862O60290 1169 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 DLX3O60479 287 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 UBOX5O94941 541 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 CAPNS1P04632 268 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 PHKG2P15735 406 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 LIG1P18858 919 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 BDNFP23560 247 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 CDC25BP30305 580 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 CYP2C19P33261 490 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 IARSP41252 1262 aaKnown RBP4.81□□□□□ -1.64
PMS1-216ENST00000447734 SETQ01105 290 aaPredicted RBP4.81□□□□□ -1.64
PMS1-216ENST00000447734 C19orf57Q0VDD7 668 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 COL9A3Q14050 684 aaPredicted RBP4.81□□□□□ -1.64
PMS1-216ENST00000447734 GBX1Q14549 363 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 ARHGAP29Q52LW3 1261 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 FAM182BQ5T319 152 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 GDF6Q6KF10 455 aaPredicted RBP4.81□□□□□ -1.64
PMS1-216ENST00000447734 ZCCHC8Q6NZY4 707 aaKnown RBP4.81□□□□□ -1.64
PMS1-216ENST00000447734 POMZP3Q6PJE2 187 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 SYT9Q86SS6 491 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 MCATQ8IVS2 390 aaKnown RBP4.81□□□□□ -1.64
PMS1-216ENST00000447734 TRIM59Q8IWR1 403 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 ZNF513Q8N8E2 541 aaPredicted RBP4.81□□□□□ -1.64
PMS1-216ENST00000447734 BTN2A2Q8WVV5 523 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 TTC17Q96AE7 1141 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 FUBP3Q96I24 572 aaKnown RBP eCLIP4.81□□□□□ -1.64
PMS1-216ENST00000447734 TMEM87BQ96K49 555 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 STRBPQ96SI9 672 aaKnown RBP4.81□□□□□ -1.64
PMS1-216ENST00000447734 MDFIQ99750 246 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 PLVAPQ9BX97 442 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 SLC13A1Q9BZW2 595 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 WNT10AQ9GZT5 417 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 TCF7L1Q9HCS4 588 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 ZBTB21Q9ULJ3 1066 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 SLC6A14Q9UN76 642 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 AKT3Q9Y243 479 aa4.81□□□□□ -1.64
PMS1-216ENST00000447734 LZTS1Q9Y250 596 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms