RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 IER2Q9BTL4 223 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 ZSWIM5Q9P217 1185 aa6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 MRPS23Q9Y3D9 190 aaKnown RBP6.31□□□□□ -1.4
HMGB1P16-201ENST00000447155 H3BS24 57 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 VAMP4O75379 141 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 CPP00450 1065 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 SCG5P05408 212 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 SNRPB2P08579 225 aaKnown RBP6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 NCLP19338 710 aaKnown RBP6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 GFRA1P56159 465 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 SUMO1P63165 101 aaKnown RBP6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 MAP4K2Q12851 820 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 GAB4Q2WGN9 574 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 TMPRSS7Q7RTY8 843 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 KCTD13Q8WZ19 329 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 UBE2FQ969M7 185 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 TMX1Q9H3N1 280 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 SEMA3GQ9NS98 782 aa6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 ZC3H7BQ9UGR2 993 aaKnown RBP6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 GPR55Q9Y2T6 319 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P16-201ENST00000447155 PITPNM2Q9BZ72 1349 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 DLX3O60479 287 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 CD3EP07766 207 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 VAV1P15498 845 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 KCNJ6P48051 423 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 PCBP3P57721 371 aaKnown RBP6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 DPY19L1Q2PZI1 675 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 TKFCQ3LXA3 575 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 USHBP1Q8N6Y0 703 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 LINC00116Q8NCU8 138 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 NCOA5Q9HCD5 579 aaKnown RBP6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 RNF112Q9ULX5 631 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 BACE2Q9Y5Z0 518 aa6.29□□□□□ -1.4
HMGB1P16-201ENST00000447155 SSU72P8A0A1W2PR75 194 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 STXBP3O00186 592 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 PLD2O14939 933 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 AURKAO14965 403 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 PPP1R12AO14974 1030 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 ZNF205O95201 554 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 TGFB1P01137 390 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 SYPP08247 313 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 ENDOUP21128 410 aaKnown RBP6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 GYS2P54840 703 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 RNF187Q5TA31 235 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 RNF111Q6ZNA4 994 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 HRASLS5Q96KN8 279 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 FCRL3Q96P31 734 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 SLC12A9Q9BXP2 914 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 MRPL4Q9BYD3 311 aaKnown RBP6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 DUSP13Q9UII6 198 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 PLAAQ9Y263 795 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 PRKAB1Q9Y478 270 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 CD2APQ9Y5K6 639 aa6.28□□□□□ -1.4
HMGB1P16-201ENST00000447155 WASH4PA8MWX3 477 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 RFPL3O75679 317 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 CENPBP07199 599 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 FURINP09958 794 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 LTKP29376 864 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 HOXA10P31260 410 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 GRIK1P39086 918 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 ECI1P42126 302 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 SCRN1Q12765 414 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 SF1Q15637 639 aaKnown RBP6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 FNDC3BQ53EP0 1204 aaKnown RBP6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 PRSS36Q5K4E3 855 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 SLC35F1Q5T1Q4 408 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 INTS5Q6P9B9 1019 aaKnown RBP6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 CREG2Q8IUH2 290 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 TMEM145Q8NBT3 493 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 ASB11Q8WXH4 323 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 COPS5Q92905 334 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 MISP3Q96FF7 219 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 C1orf159Q96HA4 380 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 MCMBPQ9BTE3 642 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 PCGF6Q9BYE7 350 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 ATP13A1Q9HD20 1204 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 VAV3Q9UKW4 847 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 TCFL5Q9UL49 500 aa6.27□□□□□ -1.41
HMGB1P16-201ENST00000447155 C2orf71A6NGG8 1288 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 IFNGR1P15260 489 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 SEPHS1P49903 392 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 PRKCQQ04759 706 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 CYP4F3Q08477 520 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 PABPC4Q13310 644 aaKnown RBP eCLIP6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 AOC3Q16853 763 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 MSMPQ1L6U9 139 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 DALRD3Q5D0E6 543 aaKnown RBP6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 RTP2Q5QGT7 225 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 EEF1DP3Q658K8 133 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 RCSD1Q6JBY9 416 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 STK11IPQ8N1F8 1099 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 KREMEN2Q8NCW0 462 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 FOXP3Q9BZS1 431 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 SEMA6BQ9H3T3 888 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 PCDHA11Q9Y5I1 949 aa6.26□□□□□ -1.41
HMGB1P16-201ENST00000447155 RAPGEF3O95398 923 aa6.25□□□□□ -1.41
HMGB1P16-201ENST00000447155 ESR1P03372 595 aa6.25□□□□□ -1.41
HMGB1P16-201ENST00000447155 THBDP07204 575 aa6.25□□□□□ -1.41
HMGB1P16-201ENST00000447155 GSTM1P09488 218 aa6.25□□□□□ -1.41
HMGB1P16-201ENST00000447155 C6orf222P0C671 652 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms