RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 SSPNQ14714 243 aa7.56□□□□□ -1.2
SFXN1-202ENST00000421887 XYLT2Q9H1B5 865 aa7.56□□□□□ -1.2
SFXN1-202ENST00000421887 GCM1Q9NP62 436 aa7.56□□□□□ -1.2
SFXN1-202ENST00000421887 BRWD3Q6RI45 1802 aa7.56□□□□□ -1.2
SFXN1-202ENST00000421887 MYOM3Q5VTT5 1437 aa7.55□□□□□ -1.2
SFXN1-202ENST00000421887 OTOL1A6NHN0 477 aaPredicted RBP7.55□□□□□ -1.2
SFXN1-202ENST00000421887 PTPN11Q06124 597 aaPredicted RBP7.55□□□□□ -1.2
SFXN1-202ENST00000421887 EGR3Q06889 387 aa7.55□□□□□ -1.2
SFXN1-202ENST00000421887 PIWIL2Q8TC59 973 aaKnown RBP7.55□□□□□ -1.2
SFXN1-202ENST00000421887 TMPRSS5Q9H3S3 457 aa7.55□□□□□ -1.2
SFXN1-202ENST00000421887 ZNF552Q9H707 407 aaPredicted RBP7.55□□□□□ -1.2
SFXN1-202ENST00000421887 CWC22Q9HCG8 908 aaKnown RBP7.55□□□□□ -1.2
SFXN1-202ENST00000421887 DUSP13Q9UII6 198 aa7.55□□□□□ -1.2
SFXN1-202ENST00000421887 CYP8B1Q9UNU6 501 aa7.55□□□□□ -1.2
SFXN1-202ENST00000421887 LMTK2Q8IWU2 1503 aa7.55□□□□□ -1.2
SFXN1-202ENST00000421887 SPHKAPQ2M3C7 1700 aa7.55□□□□□ -1.2
SFXN1-202ENST00000421887 RPRD2Q5VT52 1461 aaKnown RBP7.55□□□□□ -1.2
SFXN1-202ENST00000421887 ADAMTS13Q76LX8 1427 aa7.54□□□□□ -1.2
SFXN1-202ENST00000421887 TMEM131LA2VDJ0 1609 aa7.54□□□□□ -1.2
SFXN1-202ENST00000421887 FITM1A5D6W6 292 aa7.54□□□□□ -1.2
SFXN1-202ENST00000421887 CST3P01034 146 aaPredicted RBP7.54□□□□□ -1.2
SFXN1-202ENST00000421887 ZGLP1P0C6A0 271 aa7.54□□□□□ -1.2
SFXN1-202ENST00000421887 GSTT1P30711 240 aa7.54□□□□□ -1.2
SFXN1-202ENST00000421887 NFKB2Q00653 900 aa7.54□□□□□ -1.2
SFXN1-202ENST00000421887 SCARA3Q6AZY7 606 aa7.54□□□□□ -1.2
SFXN1-202ENST00000421887 B4GALNT3Q6L9W6 998 aa7.54□□□□□ -1.2
SFXN1-202ENST00000421887 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.54□□□□□ -1.2
SFXN1-202ENST00000421887 TRIT1Q9H3H1 467 aaKnown RBP7.54□□□□□ -1.2
SFXN1-202ENST00000421887 YBX2Q9Y2T7 364 aaKnown RBP7.54□□□□□ -1.2
SFXN1-202ENST00000421887 CROCC2H7BZ55 1655 aa7.54□□□□□ -1.2
SFXN1-202ENST00000421887 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.53□□□□□ -1.2
SFXN1-202ENST00000421887 PI3P19957 117 aa7.53□□□□□ -1.2
SFXN1-202ENST00000421887 WIPI1Q5MNZ9 446 aaPredicted RBP7.53□□□□□ -1.2
SFXN1-202ENST00000421887 ERICH6BQ5W0A0 696 aa7.53□□□□□ -1.2
SFXN1-202ENST00000421887 PCNX4Q63HM2 1172 aa7.53□□□□□ -1.2
SFXN1-202ENST00000421887 ZDHHC14Q8IZN3 488 aa7.53□□□□□ -1.2
SFXN1-202ENST00000421887 PANK1Q8TE04 598 aa7.53□□□□□ -1.2
SFXN1-202ENST00000421887 SYTL4Q96C24 671 aaPredicted RBP7.53□□□□□ -1.2
SFXN1-202ENST00000421887 BORCS6Q96GS4 357 aa7.53□□□□□ -1.2
SFXN1-202ENST00000421887 DPH2Q9BQC3 489 aaPredicted RBP7.53□□□□□ -1.2
SFXN1-202ENST00000421887 DUSP15Q9H1R2 295 aaPredicted RBP7.53□□□□□ -1.2
SFXN1-202ENST00000421887 GPR160Q9UJ42 338 aa7.53□□□□□ -1.2
SFXN1-202ENST00000421887 BCL9LQ86UU0 1499 aa7.53□□□□□ -1.2
SFXN1-202ENST00000421887 ADRB1P08588 477 aa7.52□□□□□ -1.21
SFXN1-202ENST00000421887 GRK4P32298 578 aa7.52□□□□□ -1.21
SFXN1-202ENST00000421887 CDK8P49336 464 aa7.52□□□□□ -1.21
SFXN1-202ENST00000421887 GALK1P51570 392 aa7.52□□□□□ -1.21
SFXN1-202ENST00000421887 R3HDM1Q15032 1099 aaKnown RBP7.52□□□□□ -1.21
SFXN1-202ENST00000421887 FEZF2Q8TBJ5 459 aa7.52□□□□□ -1.21
SFXN1-202ENST00000421887 DHX38Q92620 1227 aaKnown RBP7.52□□□□□ -1.21
SFXN1-202ENST00000421887 Q96M66 194 aa7.52□□□□□ -1.21
SFXN1-202ENST00000421887 RBCK1Q9BYM8 510 aa7.52□□□□□ -1.21
SFXN1-202ENST00000421887 CCDC9Q9Y3X0 531 aaKnown RBP7.52□□□□□ -1.21
SFXN1-202ENST00000421887 COL22A1Q8NFW1 1626 aaPredicted RBP7.52□□□□□ -1.21
SFXN1-202ENST00000421887 ADGRL3Q9HAR2 1447 aa7.52□□□□□ -1.21
SFXN1-202ENST00000421887 PNMA6FA0A0J9YX94 578 aa7.51□□□□□ -1.21
SFXN1-202ENST00000421887 CELA3AP09093 270 aa7.51□□□□□ -1.21
SFXN1-202ENST00000421887 GAB4Q2WGN9 574 aa7.51□□□□□ -1.21
SFXN1-202ENST00000421887 KRT27Q7Z3Y8 459 aa7.51□□□□□ -1.21
SFXN1-202ENST00000421887 UNC5CLQ8IV45 518 aa7.51□□□□□ -1.21
SFXN1-202ENST00000421887 GPATCH2Q9NW75 528 aa7.51□□□□□ -1.21
SFXN1-202ENST00000421887 PPM1HQ9ULR3 514 aa7.51□□□□□ -1.21
SFXN1-202ENST00000421887 IRAK3Q9Y616 596 aa7.51□□□□□ -1.21
SFXN1-202ENST00000421887 SNCAIPQ9Y6H5 919 aa7.51□□□□□ -1.21
SFXN1-202ENST00000421887 NALCNQ8IZF0 1738 aa7.51□□□□□ -1.21
SFXN1-202ENST00000421887 XRN1Q8IZH2 1706 aaKnown RBP7.51□□□□□ -1.21
SFXN1-202ENST00000421887 LAMC1P11047 1609 aa7.51□□□□□ -1.21
SFXN1-202ENST00000421887 PTPRUQ92729 1446 aa7.51□□□□□ -1.21
SFXN1-202ENST00000421887 C1orf167Q5SNV9 1468 aa7.5□□□□□ -1.21
SFXN1-202ENST00000421887 RALGAPBQ86X10 1494 aa7.5□□□□□ -1.21
SFXN1-202ENST00000421887 ANKRD30AQ9BXX3 1397 aa7.5□□□□□ -1.21
SFXN1-202ENST00000421887 ETV3P41162 512 aa7.5□□□□□ -1.21
SFXN1-202ENST00000421887 AFF3P51826 1226 aaKnown RBP7.5□□□□□ -1.21
SFXN1-202ENST00000421887 CCDC82Q8N4S0 544 aa7.5□□□□□ -1.21
SFXN1-202ENST00000421887 PPP1R1BQ9UD71 204 aaPredicted RBP7.5□□□□□ -1.21
SFXN1-202ENST00000421887 NR0B2Q15466 257 aa7.49□□□□□ -1.21
SFXN1-202ENST00000421887 VMACQ2NL98 169 aa7.49□□□□□ -1.21
SFXN1-202ENST00000421887 SPPL2CQ8IUH8 684 aa7.49□□□□□ -1.21
SFXN1-202ENST00000421887 SIRT2Q8IXJ6 389 aa7.49□□□□□ -1.21
SFXN1-202ENST00000421887 SIGLEC10Q96LC7 697 aa7.49□□□□□ -1.21
SFXN1-202ENST00000421887 ORAI2Q96SN7 254 aa7.49□□□□□ -1.21
SFXN1-202ENST00000421887 GLI3P10071 1580 aa7.49□□□□□ -1.21
SFXN1-202ENST00000421887 RGPD1P0DJD0 1748 aa7.49□□□□□ -1.21
SFXN1-202ENST00000421887 NPHP3Q7Z494 1330 aa7.49□□□□□ -1.21
SFXN1-202ENST00000421887 PSPNO60542 156 aa7.48□□□□□ -1.21
SFXN1-202ENST00000421887 SRSF3P84103 164 aaKnown RBP7.48□□□□□ -1.21
SFXN1-202ENST00000421887 TMC7Q7Z402 723 aa7.48□□□□□ -1.21
SFXN1-202ENST00000421887 HOMEZQ8IX15 550 aa7.48□□□□□ -1.21
SFXN1-202ENST00000421887 PPP1R13LQ8WUF5 828 aa7.48□□□□□ -1.21
SFXN1-202ENST00000421887 PCDHA11Q9Y5I1 949 aa7.48□□□□□ -1.21
SFXN1-202ENST00000421887 MYOM2P54296 1465 aa7.48□□□□□ -1.21
SFXN1-202ENST00000421887 ABCC5O15440 1437 aa7.47□□□□□ -1.21
SFXN1-202ENST00000421887 DAPK1P53355 1430 aa7.47□□□□□ -1.21
SFXN1-202ENST00000421887 OR14I1A6ND48 311 aa7.47□□□□□ -1.21
SFXN1-202ENST00000421887 SNX17Q15036 470 aa7.47□□□□□ -1.21
SFXN1-202ENST00000421887 ZXDCQ2QGD7 858 aaPredicted RBP7.47□□□□□ -1.21
SFXN1-202ENST00000421887 ZNF326Q5BKZ1 582 aaKnown RBP7.47□□□□□ -1.21
SFXN1-202ENST00000421887 ADGRF1Q5T601 910 aa7.47□□□□□ -1.21
SFXN1-202ENST00000421887 TSPYL5Q86VY4 417 aaPredicted RBP7.47□□□□□ -1.21
SFXN1-202ENST00000421887 SIRT5Q9NXA8 310 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms