RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 HIRAP54198 1017 aaPredicted RBP23.96■■□□□ 1.43
GPC1-202ENST00000420138 ZNF579Q8NAF0 562 aaKnown RBP23.96■■□□□ 1.43
GPC1-202ENST00000420138 BMP15O95972 392 aa23.95■■□□□ 1.42
GPC1-202ENST00000420138 BMP3P12645 472 aa23.95■■□□□ 1.42
GPC1-202ENST00000420138 ATP2C1P98194 919 aaPredicted RBP23.95■■□□□ 1.42
GPC1-202ENST00000420138 ANGEL2Q5VTE6 544 aaKnown RBP23.95■■□□□ 1.42
GPC1-202ENST00000420138 BTNL9Q6UXG8 535 aa23.95■■□□□ 1.42
GPC1-202ENST00000420138 RTN4Q9NQC3 1192 aaKnown RBP23.95■■□□□ 1.42
GPC1-202ENST00000420138 CCDC194A0A1B0GVG4 234 aa23.94■■□□□ 1.42
GPC1-202ENST00000420138 CTAGE5O15320 804 aa23.94■■□□□ 1.42
GPC1-202ENST00000420138 QRICH1Q2TAL8 776 aa23.94■■□□□ 1.42
GPC1-202ENST00000420138 NBPF12Q5TAG4 269 aaPredicted RBP23.94■■□□□ 1.42
GPC1-202ENST00000420138 PPP1R18Q6NYC8 613 aa23.94■■□□□ 1.42
GPC1-202ENST00000420138 APOBEC3FQ8IUX4 373 aaKnown RBP23.94■■□□□ 1.42
GPC1-202ENST00000420138 C4orf32Q8N8J7 132 aa23.94■■□□□ 1.42
GPC1-202ENST00000420138 RNF214Q8ND24 703 aa23.94■■□□□ 1.42
GPC1-202ENST00000420138 GLIS2Q9BZE0 524 aaPredicted RBP23.94■■□□□ 1.42
GPC1-202ENST00000420138 ADARB2Q9NS39 739 aaKnown RBP23.94■■□□□ 1.42
GPC1-202ENST00000420138 PTGDRQ13258 359 aa23.94■■□□□ 1.42
GPC1-202ENST00000420138 SPECC1Q5M775 1068 aa23.94■■□□□ 1.42
GPC1-202ENST00000420138 SPICE1Q8N0Z3 855 aa23.94■■□□□ 1.42
GPC1-202ENST00000420138 ASNSP08243 561 aa23.93■■□□□ 1.42
GPC1-202ENST00000420138 TYRO3Q06418 890 aa23.93■■□□□ 1.42
GPC1-202ENST00000420138 INF2Q27J81 1249 aa23.93■■□□□ 1.42
GPC1-202ENST00000420138 CCDC84Q86UT8 332 aaPredicted RBP23.93■■□□□ 1.42
GPC1-202ENST00000420138 CSRNP2Q9H175 543 aa23.93■■□□□ 1.42
GPC1-202ENST00000420138 GGA3Q9NZ52 723 aa23.93■■□□□ 1.42
GPC1-202ENST00000420138 SCN4AP35499 1836 aa23.93■■□□□ 1.42
GPC1-202ENST00000420138 ATAD5Q96QE3 1844 aa23.93■■□□□ 1.42
GPC1-202ENST00000420138 TMEM232C9JQI7 657 aa23.92■■□□□ 1.42
GPC1-202ENST00000420138 CCDC192P0DO97 292 aa23.92■■□□□ 1.42
GPC1-202ENST00000420138 MCM7P33993 719 aa23.92■■□□□ 1.42
GPC1-202ENST00000420138 SYKP43405 635 aa23.92■■□□□ 1.42
GPC1-202ENST00000420138 CDC37Q16543 378 aaPredicted RBP23.92■■□□□ 1.42
GPC1-202ENST00000420138 KRT25Q7Z3Z0 450 aa23.92■■□□□ 1.42
GPC1-202ENST00000420138 USP49Q70CQ1 688 aa23.91■■□□□ 1.42
GPC1-202ENST00000420138 TRIM44Q96DX7 344 aaPredicted RBP23.91■■□□□ 1.42
GPC1-202ENST00000420138 TIGD1Q96MW7 591 aa23.91■■□□□ 1.42
GPC1-202ENST00000420138 VCPKMTQ9H867 229 aa23.91■■□□□ 1.42
GPC1-202ENST00000420138 TMEM260Q9NX78 707 aa23.91■■□□□ 1.42
GPC1-202ENST00000420138 BIN2Q9UBW5 565 aaPredicted RBP23.91■■□□□ 1.42
GPC1-202ENST00000420138 KCNH3Q9ULD8 1083 aa23.91■■□□□ 1.42
GPC1-202ENST00000420138 CLK2P49760 499 aaKnown RBP23.91■■□□□ 1.42
GPC1-202ENST00000420138 ADCY7P51828 1080 aa23.91■■□□□ 1.42
GPC1-202ENST00000420138 IL17AQ16552 155 aa23.91■■□□□ 1.42
GPC1-202ENST00000420138 SYDE2Q5VT97 1194 aa23.91■■□□□ 1.42
GPC1-202ENST00000420138 REXO1Q8N1G1 1221 aaKnown RBP23.91■■□□□ 1.42
GPC1-202ENST00000420138 FERMT2Q96AC1 680 aa23.91■■□□□ 1.42
GPC1-202ENST00000420138 L3MBTL3Q96JM7 780 aaPredicted RBP23.91■■□□□ 1.42
GPC1-202ENST00000420138 RIC8AQ9NPQ8 531 aa23.91■■□□□ 1.42
GPC1-202ENST00000420138 GLTPD2A6NH11 291 aa23.9■■□□□ 1.42
GPC1-202ENST00000420138 GOPCQ9HD26 462 aa23.9■■□□□ 1.42
GPC1-202ENST00000420138 EDIL3O43854 480 aa23.89■■□□□ 1.42
GPC1-202ENST00000420138 NONOQ15233 471 aaKnown RBP eCLIP23.89■■□□□ 1.42
GPC1-202ENST00000420138 JAKMIP3Q5VZ66 844 aa23.89■■□□□ 1.42
GPC1-202ENST00000420138 CTNND1O60716 968 aaKnown RBP23.89■■□□□ 1.41
GPC1-202ENST00000420138 SNAP25P60880 206 aa23.89■■□□□ 1.41
GPC1-202ENST00000420138 FAM83BQ5T0W9 1011 aa23.89■■□□□ 1.41
GPC1-202ENST00000420138 PRAMEF18Q5VWM3 479 aa23.89■■□□□ 1.41
GPC1-202ENST00000420138 ERCC4Q92889 916 aaPredicted RBP23.89■■□□□ 1.41
GPC1-202ENST00000420138 SDF4Q9BRK5 362 aa23.89■■□□□ 1.41
GPC1-202ENST00000420138 PRR12Q9ULL5 1215 aa23.89■■□□□ 1.41
GPC1-202ENST00000420138 LONRF3Q496Y0 759 aa23.88■■□□□ 1.41
GPC1-202ENST00000420138 GINM1Q9NU53 330 aa23.88■■□□□ 1.41
GPC1-202ENST00000420138 ZNF112Q9UJU3 913 aa23.88■■□□□ 1.41
GPC1-202ENST00000420138 INPP5BP32019 993 aa23.87■■□□□ 1.41
GPC1-202ENST00000420138 TBCKQ8TEA7 893 aa23.87■■□□□ 1.41
GPC1-202ENST00000420138 PITPNM2Q9BZ72 1349 aa23.87■■□□□ 1.41
GPC1-202ENST00000420138 TMEM60Q9H2L4 133 aa23.87■■□□□ 1.41
GPC1-202ENST00000420138 SH2D4AQ9H788 454 aa23.87■■□□□ 1.41
GPC1-202ENST00000420138 PCDHA1Q9Y5I3 950 aa23.87■■□□□ 1.41
GPC1-202ENST00000420138 STAT2P52630 851 aa23.87■■□□□ 1.41
GPC1-202ENST00000420138 ZYXQ15942 572 aaKnown RBP23.87■■□□□ 1.41
GPC1-202ENST00000420138 UBE2SQ16763 222 aa23.87■■□□□ 1.41
GPC1-202ENST00000420138 ARL6IP4Q66PJ3 421 aaKnown RBP23.87■■□□□ 1.41
GPC1-202ENST00000420138 SASS6Q6UVJ0 657 aa23.87■■□□□ 1.41
GPC1-202ENST00000420138 EPSTI1Q96J88 318 aa23.87■■□□□ 1.41
GPC1-202ENST00000420138 FAM13BQ9NYF5 915 aa23.87■■□□□ 1.41
GPC1-202ENST00000420138 VWA3AA6NCI4 1184 aa23.86■■□□□ 1.41
GPC1-202ENST00000420138 KRBA2Q6ZNG9 492 aa23.86■■□□□ 1.41
GPC1-202ENST00000420138 NEK8Q86SG6 692 aa23.86■■□□□ 1.41
GPC1-202ENST00000420138 CUL5Q93034 780 aa23.86■■□□□ 1.41
GPC1-202ENST00000420138 ZNF341Q9BYN7 854 aa23.86■■□□□ 1.41
GPC1-202ENST00000420138 PSTPIP2Q9H939 334 aa23.86■■□□□ 1.41
GPC1-202ENST00000420138 KIAA1468Q9P260 1216 aa23.86■■□□□ 1.41
GPC1-202ENST00000420138 PPP2R3BQ9Y5P8 575 aa23.86■■□□□ 1.41
GPC1-202ENST00000420138 WDR90Q96KV7 1748 aa23.85■■□□□ 1.41
GPC1-202ENST00000420138 PLA2G6O60733 806 aa23.85■■□□□ 1.41
GPC1-202ENST00000420138 EPHX2P34913 555 aa23.85■■□□□ 1.41
GPC1-202ENST00000420138 IKQ13123 557 aaPredicted RBP23.85■■□□□ 1.41
GPC1-202ENST00000420138 AMNQ9BXJ7 453 aa23.85■■□□□ 1.41
GPC1-202ENST00000420138 SSC5DA1L4H1 1573 aa23.85■■□□□ 1.41
GPC1-202ENST00000420138 A0A087X0B3 334 aa23.84■■□□□ 1.41
GPC1-202ENST00000420138 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.84■■□□□ 1.41
GPC1-202ENST00000420138 MRPL12P52815 198 aaKnown RBP23.84■■□□□ 1.41
GPC1-202ENST00000420138 UVSSAQ2YD98 709 aa23.84■■□□□ 1.41
GPC1-202ENST00000420138 ANO6Q4KMQ2 910 aa23.84■■□□□ 1.41
GPC1-202ENST00000420138 DCAF15Q66K64 600 aa23.84■■□□□ 1.41
GPC1-202ENST00000420138 USP50Q70EL3 339 aaPredicted RBP23.84■■□□□ 1.41
GPC1-202ENST00000420138 SYMPKQ92797 1274 aaKnown RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms