RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 MYLIPQ8WY64 445 aa7.1□□□□□ -1.27
HMGB1P49-201ENST00000418882 MRGPRX3Q96LB0 322 aa7.1□□□□□ -1.27
HMGB1P49-201ENST00000418882 PLCD4Q9BRC7 762 aa7.1□□□□□ -1.27
HMGB1P49-201ENST00000418882 SUGT1Q9Y2Z0 365 aa7.1□□□□□ -1.27
HMGB1P49-201ENST00000418882 BIN1O00499 593 aa7.09□□□□□ -1.27
HMGB1P49-201ENST00000418882 FGF10O15520 208 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P49-201ENST00000418882 DUSP4Q13115 394 aa7.09□□□□□ -1.27
HMGB1P49-201ENST00000418882 NR0B2Q15466 257 aa7.09□□□□□ -1.27
HMGB1P49-201ENST00000418882 SLC10A6Q3KNW5 377 aa7.09□□□□□ -1.27
HMGB1P49-201ENST00000418882 SLCO6A1Q86UG4 719 aa7.09□□□□□ -1.27
HMGB1P49-201ENST00000418882 ANKS4BQ8N8V4 417 aa7.09□□□□□ -1.27
HMGB1P49-201ENST00000418882 ABHD4Q8TB40 342 aa7.09□□□□□ -1.27
HMGB1P49-201ENST00000418882 LIN37Q96GY3 246 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P49-201ENST00000418882 CCDC120Q96HB5 630 aa7.09□□□□□ -1.27
HMGB1P49-201ENST00000418882 APBA2Q99767 749 aa7.09□□□□□ -1.27
HMGB1P49-201ENST00000418882 AKT3Q9Y243 479 aa7.09□□□□□ -1.27
HMGB1P49-201ENST00000418882 FITM1A5D6W6 292 aa7.08□□□□□ -1.28
HMGB1P49-201ENST00000418882 AURKAO14965 403 aa7.08□□□□□ -1.28
HMGB1P49-201ENST00000418882 KCNH1O95259 989 aa7.08□□□□□ -1.28
HMGB1P49-201ENST00000418882 ITGAVP06756 1048 aa7.08□□□□□ -1.28
HMGB1P49-201ENST00000418882 ZNF143P52747 638 aaPredicted RBP7.08□□□□□ -1.28
HMGB1P49-201ENST00000418882 KCNMB1Q16558 191 aa7.08□□□□□ -1.28
HMGB1P49-201ENST00000418882 CEP128Q6ZU80 1094 aa7.08□□□□□ -1.28
HMGB1P49-201ENST00000418882 ZNF227Q86WZ6 799 aa7.08□□□□□ -1.28
HMGB1P49-201ENST00000418882 TRIM59Q8IWR1 403 aa7.08□□□□□ -1.28
HMGB1P49-201ENST00000418882 BVESQ8NE79 360 aa7.08□□□□□ -1.28
HMGB1P49-201ENST00000418882 GLI1P08151 1106 aa7.07□□□□□ -1.28
HMGB1P49-201ENST00000418882 KIR2DL1P43626 348 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P49-201ENST00000418882 KIR2DL2P43627 348 aaPredicted RBP7.07□□□□□ -1.28
HMGB1P49-201ENST00000418882 POU4F1Q01851 419 aa7.07□□□□□ -1.28
HMGB1P49-201ENST00000418882 GRB10Q13322 594 aa7.07□□□□□ -1.28
HMGB1P49-201ENST00000418882 SERINC3Q13530 473 aa7.07□□□□□ -1.28
HMGB1P49-201ENST00000418882 SV2CQ496J9 727 aa7.07□□□□□ -1.28
HMGB1P49-201ENST00000418882 NLRX1Q86UT6 975 aa7.07□□□□□ -1.28
HMGB1P49-201ENST00000418882 OXR1Q8N573 874 aa7.07□□□□□ -1.28
HMGB1P49-201ENST00000418882 BTN2A2Q8WVV5 523 aa7.07□□□□□ -1.28
HMGB1P49-201ENST00000418882 PPP1R14AQ96A00 147 aa7.07□□□□□ -1.28
HMGB1P49-201ENST00000418882 JMJD8Q96S16 334 aa7.07□□□□□ -1.28
HMGB1P49-201ENST00000418882 KCNK12Q9HB15 430 aa7.07□□□□□ -1.28
HMGB1P49-201ENST00000418882 MSRB2Q9Y3D2 182 aa7.07□□□□□ -1.28
HMGB1P49-201ENST00000418882 R3HCC1Q9Y3T6 440 aaKnown RBP7.07□□□□□ -1.28
HMGB1P49-201ENST00000418882 NRDCO43847 1150 aa7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 CAPNS1P04632 268 aa7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 RAC2P15153 192 aa7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 GRIA2P42262 883 aa7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 AMPD2Q01433 879 aa7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 CHRNEQ04844 493 aa7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 RBL2Q08999 1139 aa7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 SF1Q15637 639 aaKnown RBP7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 HSF5Q4G112 596 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 TMEM67Q5HYA8 995 aa7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 GTF2IRD2BQ6EKJ0 949 aa7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 GTF2IRD2Q86UP8 949 aa7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 SIRT2Q8IXJ6 389 aa7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 CKAP2LQ8IYA6 745 aa7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 SREK1Q8WXA9 508 aaKnown RBP7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 ASIC4Q96FT7 647 aa7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 PTCHD1Q96NR3 888 aa7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 KRTAP4-8Q9BYQ9 185 aa7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 TNFRSF10DQ9UBN6 386 aa7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 GPR160Q9UJ42 338 aa7.06□□□□□ -1.28
HMGB1P49-201ENST00000418882 MSL3P1P0C860 447 aa7.05□□□□□ -1.28
HMGB1P49-201ENST00000418882 RTP1P59025 263 aa7.05□□□□□ -1.28
HMGB1P49-201ENST00000418882 MBLAC2Q68D91 279 aa7.05□□□□□ -1.28
HMGB1P49-201ENST00000418882 RCSD1Q6JBY9 416 aa7.05□□□□□ -1.28
HMGB1P49-201ENST00000418882 EEPD1Q7L9B9 569 aa7.05□□□□□ -1.28
HMGB1P49-201ENST00000418882 SYTL4Q96C24 671 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P49-201ENST00000418882 TRIM55Q9BYV6 548 aa7.05□□□□□ -1.28
HMGB1P49-201ENST00000418882 GPRC5CQ9NQ84 441 aa7.05□□□□□ -1.28
HMGB1P49-201ENST00000418882 A0A1W2PQU0 124 aa7.04□□□□□ -1.28
HMGB1P49-201ENST00000418882 C2orf71A6NGG8 1288 aa7.04□□□□□ -1.28
HMGB1P49-201ENST00000418882 ARNTLO00327 626 aa7.04□□□□□ -1.28
HMGB1P49-201ENST00000418882 NOP2P46087 812 aaKnown RBP7.04□□□□□ -1.28
HMGB1P49-201ENST00000418882 SCRN1Q12765 414 aa7.04□□□□□ -1.28
HMGB1P49-201ENST00000418882 PRR23BQ6ZRT6 265 aa7.04□□□□□ -1.28
HMGB1P49-201ENST00000418882 SPPL2CQ8IUH8 684 aa7.04□□□□□ -1.28
HMGB1P49-201ENST00000418882 LILRA2Q8N149 483 aa7.04□□□□□ -1.28
HMGB1P49-201ENST00000418882 COPS5Q92905 334 aa7.04□□□□□ -1.28
HMGB1P49-201ENST00000418882 ARMC5Q96C12 935 aa7.04□□□□□ -1.28
HMGB1P49-201ENST00000418882 FMNL2Q96PY5 1086 aa7.04□□□□□ -1.28
HMGB1P49-201ENST00000418882 DNAJC2Q99543 621 aaKnown RBP7.04□□□□□ -1.28
HMGB1P49-201ENST00000418882 YBX2Q9Y2T7 364 aaKnown RBP7.04□□□□□ -1.28
HMGB1P49-201ENST00000418882 RNF114Q9Y508 228 aa7.04□□□□□ -1.28
HMGB1P49-201ENST00000418882 BACE2Q9Y5Z0 518 aa7.04□□□□□ -1.28
HMGB1P49-201ENST00000418882 NAT2P11245 290 aa7.03□□□□□ -1.28
HMGB1P49-201ENST00000418882 SDHBP21912 280 aa7.03□□□□□ -1.28
HMGB1P49-201ENST00000418882 SF3A1Q15459 793 aaKnown RBP7.03□□□□□ -1.28
HMGB1P49-201ENST00000418882 PRSS53Q2L4Q9 553 aa7.03□□□□□ -1.28
HMGB1P49-201ENST00000418882 SPATC1Q76KD6 591 aa7.03□□□□□ -1.28
HMGB1P49-201ENST00000418882 NAT16Q8N8M0 369 aa7.03□□□□□ -1.28
HMGB1P49-201ENST00000418882 NKX2-4Q9H2Z4 354 aa7.03□□□□□ -1.28
HMGB1P49-201ENST00000418882 IMPACTQ9P2X3 320 aa7.03□□□□□ -1.28
HMGB1P49-201ENST00000418882 FAM221BA6H8Z2 402 aa7.02□□□□□ -1.29
HMGB1P49-201ENST00000418882 CCDC85CA6NKD9 419 aa7.02□□□□□ -1.29
HMGB1P49-201ENST00000418882 NOP56O00567 594 aaKnown RBP7.02□□□□□ -1.29
HMGB1P49-201ENST00000418882 THBDP07204 575 aa7.02□□□□□ -1.29
HMGB1P49-201ENST00000418882 ENDOUP21128 410 aaKnown RBP7.02□□□□□ -1.29
HMGB1P49-201ENST00000418882 RASA3Q14644 834 aa7.02□□□□□ -1.29
HMGB1P49-201ENST00000418882 SLC14A2Q15849 920 aa7.02□□□□□ -1.29
HMGB1P49-201ENST00000418882 EEF1DP3Q658K8 133 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms