RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 CRACR2BQ8N4Y2 399 aaPredicted RBP15.29■□□□□ 0.04
HLA-DMB-258ENST00000418107 SLC44A5Q8NCS7 719 aa15.29■□□□□ 0.04
HLA-DMB-258ENST00000418107 NSUN7Q8NE18 718 aaKnown RBP15.29■□□□□ 0.04
HLA-DMB-258ENST00000418107 MYL10Q9BUA6 226 aa15.29■□□□□ 0.04
HLA-DMB-258ENST00000418107 PORCNQ9H237 461 aa15.29■□□□□ 0.04
HLA-DMB-258ENST00000418107 RBPJLQ9UBG7 517 aa15.29■□□□□ 0.04
HLA-DMB-258ENST00000418107 C19orf81C9J6K1 198 aa15.28■□□□□ 0.04
HLA-DMB-258ENST00000418107 USP17L10C9JJH3 530 aa15.28■□□□□ 0.04
HLA-DMB-258ENST00000418107 CACNB2Q08289 660 aaPredicted RBP15.28■□□□□ 0.04
HLA-DMB-258ENST00000418107 CCL14Q16627 93 aa15.28■□□□□ 0.04
HLA-DMB-258ENST00000418107 RTN1Q16799 776 aa15.28■□□□□ 0.04
HLA-DMB-258ENST00000418107 Q3C1V9 767 aa15.28■□□□□ 0.04
HLA-DMB-258ENST00000418107 LRIT3Q3SXY7 679 aa15.28■□□□□ 0.04
HLA-DMB-258ENST00000418107 ZNF654Q8IZM8 581 aa15.28■□□□□ 0.04
HLA-DMB-258ENST00000418107 ENAHQ8N8S7 591 aaPredicted RBP15.28■□□□□ 0.04
HLA-DMB-258ENST00000418107 SMARCC2Q8TAQ2 1214 aa15.28■□□□□ 0.04
HLA-DMB-258ENST00000418107 PAGR1Q9BTK6 254 aa15.28■□□□□ 0.04
HLA-DMB-258ENST00000418107 UBE2OQ9C0C9 1292 aaKnown RBP15.28■□□□□ 0.04
HLA-DMB-258ENST00000418107 ZBTB21Q9ULJ3 1066 aa15.28■□□□□ 0.04
HLA-DMB-258ENST00000418107 MYH6P13533 1939 aa15.28■□□□□ 0.04
HLA-DMB-258ENST00000418107 TCHHQ07283 1943 aa15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 CCDC196A0A1B0GTZ2 297 aa15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 ZSCAN22P10073 491 aaPredicted RBP15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 RASA1P20936 1047 aa15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 CCND3P30281 292 aaPredicted RBP15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 MAPK4P31152 587 aa15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 MCM4P33991 863 aa15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 FOSBP53539 338 aa15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 ERVK-9P63128 1117 aa15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 ERVK-24P63145 666 aa15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 SEC23AQ15436 765 aa15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 POTEEQ6S8J3 1075 aa15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 METTL16Q86W50 562 aaKnown RBP15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 FOXP4Q8IVH2 680 aaPredicted RBP15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 CCAR1Q8IX12 1150 aaKnown RBP15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 USP6NLQ92738 828 aa15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 SWAP70Q9UH65 585 aa15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 SERPINB13Q9UIV8 391 aa15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 ZDHHC9Q9Y397 364 aa15.27■□□□□ 0.04
HLA-DMB-258ENST00000418107 NMT2O60551 498 aa15.26■□□□□ 0.03
HLA-DMB-258ENST00000418107 PPFIA3O75145 1194 aa15.26■□□□□ 0.03
HLA-DMB-258ENST00000418107 BAG4O95429 457 aaKnown RBP15.26■□□□□ 0.03
HLA-DMB-258ENST00000418107 CTDNEP1O95476 244 aa15.26■□□□□ 0.03
HLA-DMB-258ENST00000418107 COL6A1P12109 1028 aa15.26■□□□□ 0.03
HLA-DMB-258ENST00000418107 ADD1P35611 737 aaKnown RBP15.26■□□□□ 0.03
HLA-DMB-258ENST00000418107 RGS2P41220 211 aa15.26■□□□□ 0.03
HLA-DMB-258ENST00000418107 MORN1Q5T089 497 aa15.26■□□□□ 0.03
HLA-DMB-258ENST00000418107 GPR142Q7Z601 462 aa15.26■□□□□ 0.03
HLA-DMB-258ENST00000418107 TRMT44Q8IYL2 757 aaKnown RBP15.26■□□□□ 0.03
HLA-DMB-258ENST00000418107 ANP32EQ9BTT0 268 aa15.26■□□□□ 0.03
HLA-DMB-258ENST00000418107 KAT14Q9H8E8 782 aa15.26■□□□□ 0.03
HLA-DMB-258ENST00000418107 EMILIN3Q9NT22 766 aa15.26■□□□□ 0.03
HLA-DMB-258ENST00000418107 ORC3Q9UBD5 711 aaPredicted RBP15.26■□□□□ 0.03
HLA-DMB-258ENST00000418107 ATP6V1DQ9Y5K8 247 aa15.26■□□□□ 0.03
HLA-DMB-258ENST00000418107 DDX11L8A8MPP1 907 aa15.25■□□□□ 0.03
HLA-DMB-258ENST00000418107 CALM1P0DP23 149 aa15.25■□□□□ 0.03
HLA-DMB-258ENST00000418107 CALM2P0DP24 149 aa15.25■□□□□ 0.03
HLA-DMB-258ENST00000418107 CALM3P0DP25 149 aa15.25■□□□□ 0.03
HLA-DMB-258ENST00000418107 RCAN1P53805 252 aa15.25■□□□□ 0.03
HLA-DMB-258ENST00000418107 SSRP1Q08945 709 aaKnown RBP15.25■□□□□ 0.03
HLA-DMB-258ENST00000418107 LRRC26Q2I0M4 334 aa15.25■□□□□ 0.03
HLA-DMB-258ENST00000418107 FOXD4L6Q3SYB3 417 aaPredicted RBP15.25■□□□□ 0.03
HLA-DMB-258ENST00000418107 LHX8Q68G74 356 aa15.25■□□□□ 0.03
HLA-DMB-258ENST00000418107 MCTP1Q6DN14 999 aa15.25■□□□□ 0.03
HLA-DMB-258ENST00000418107 FOXD4L3Q6VB84 417 aaPredicted RBP15.25■□□□□ 0.03
HLA-DMB-258ENST00000418107 PLEKHH3Q7Z736 793 aa15.25■□□□□ 0.03
HLA-DMB-258ENST00000418107 APBA2Q99767 749 aa15.25■□□□□ 0.03
HLA-DMB-258ENST00000418107 GINM1Q9NU53 330 aa15.25■□□□□ 0.03
HLA-DMB-258ENST00000418107 MTMR10Q9NXD2 777 aa15.25■□□□□ 0.03
HLA-DMB-258ENST00000418107 STXBP5LQ9Y2K9 1186 aa15.25■□□□□ 0.03
HLA-DMB-258ENST00000418107 MPHOSPH10O00566 681 aaKnown RBP15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 F13A1P00488 732 aa15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 PTMSP20962 102 aa15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 CDC27P30260 824 aa15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 MDM2Q00987 491 aaPredicted RBP15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 PPP2R5BQ15173 497 aa15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 USP17L2Q6R6M4 530 aa15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 FANCBQ8NB91 859 aa15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 GTF3C2Q8WUA4 911 aaPredicted RBP15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 TCP11L1Q9NUJ3 509 aa15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 STX8Q9UNK0 236 aa15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 MTMR6Q9Y217 621 aa15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 DDAH1O94760 285 aa15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 GH2P01242 217 aa15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 AKAP17AQ02040 695 aaKnown RBP15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 ZYXQ15942 572 aaKnown RBP15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 DGKHQ86XP1 1220 aa15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 TRIM22Q8IYM9 498 aa15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 NEDD1Q8NHV4 660 aa15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 CTCFLQ8NI51 663 aaPredicted RBP15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 SLC26A6Q9BXS9 759 aa15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 RBM28Q9NW13 759 aaKnown RBP15.24■□□□□ 0.03
HLA-DMB-258ENST00000418107 UNC80Q8N2C7 3258 aa15.23■□□□□ 0.03
HLA-DMB-258ENST00000418107 CNMDO75829 334 aa15.23■□□□□ 0.03
HLA-DMB-258ENST00000418107 GABPAQ06546 454 aa15.23■□□□□ 0.03
HLA-DMB-258ENST00000418107 MAP2K5Q13163 448 aa15.23■□□□□ 0.03
HLA-DMB-258ENST00000418107 PHKBQ93100 1093 aa15.23■□□□□ 0.03
HLA-DMB-258ENST00000418107 C8orf76Q96K31 380 aa15.23■□□□□ 0.03
HLA-DMB-258ENST00000418107 FEZ1Q99689 392 aa15.23■□□□□ 0.03
HLA-DMB-258ENST00000418107 EHD4Q9H223 541 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms