RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 ST13P50502 369 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-203ENST00000415825 CAMK2GQ13555 558 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-203ENST00000415825 ARSHQ5FYA8 562 aa5.68□□□□□ -1.5
TRAPPC13-203ENST00000415825 SNAP47Q5SQN1 464 aa5.68□□□□□ -1.5
TRAPPC13-203ENST00000415825 CWF19L1Q69YN2 538 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-203ENST00000415825 BICRALQ6AI39 1079 aa5.68□□□□□ -1.5
TRAPPC13-203ENST00000415825 TTLL7Q6ZT98 887 aa5.68□□□□□ -1.5
TRAPPC13-203ENST00000415825 SLCO6A1Q86UG4 719 aa5.68□□□□□ -1.5
TRAPPC13-203ENST00000415825 PHC3Q8NDX5 983 aa5.68□□□□□ -1.5
TRAPPC13-203ENST00000415825 FNIP1Q8TF40 1166 aa5.68□□□□□ -1.5
TRAPPC13-203ENST00000415825 MKRN2Q9H000 416 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-203ENST00000415825 MEIS1O00470 390 aa5.67□□□□□ -1.5
TRAPPC13-203ENST00000415825 ITGB3P05106 788 aa5.67□□□□□ -1.5
TRAPPC13-203ENST00000415825 NCAM1P13591 858 aa5.67□□□□□ -1.5
TRAPPC13-203ENST00000415825 IGFBP6P24592 240 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-203ENST00000415825 BMP8BP34820 402 aa5.67□□□□□ -1.5
TRAPPC13-203ENST00000415825 KIR3DS1Q14943 382 aa5.67□□□□□ -1.5
TRAPPC13-203ENST00000415825 NBPF12Q5TAG4 269 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-203ENST00000415825 FAM124AQ86V42 546 aa5.67□□□□□ -1.5
TRAPPC13-203ENST00000415825 TTC9BQ8N6N2 239 aa5.67□□□□□ -1.5
TRAPPC13-203ENST00000415825 SAMD11Q96NU1 681 aa5.67□□□□□ -1.5
TRAPPC13-203ENST00000415825 DSCC1Q9BVC3 393 aa5.67□□□□□ -1.5
TRAPPC13-203ENST00000415825 ERVK13-1Q9NX77 482 aa5.67□□□□□ -1.5
TRAPPC13-203ENST00000415825 NTMQ9P121 344 aa5.67□□□□□ -1.5
TRAPPC13-203ENST00000415825 PCDHB12Q9Y5F1 795 aa5.67□□□□□ -1.5
TRAPPC13-203ENST00000415825 IRS2Q9Y4H2 1338 aa5.67□□□□□ -1.5
TRAPPC13-203ENST00000415825 F13A1P00488 732 aa5.66□□□□□ -1.5
TRAPPC13-203ENST00000415825 GBP2P32456 591 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-203ENST00000415825 ITGAEP38570 1179 aa5.66□□□□□ -1.5
TRAPPC13-203ENST00000415825 MPP2Q14168 576 aa5.66□□□□□ -1.5
TRAPPC13-203ENST00000415825 CWF19L2Q2TBE0 894 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-203ENST00000415825 MEI1Q5TIA1 1274 aa5.66□□□□□ -1.5
TRAPPC13-203ENST00000415825 SAPCD2Q86UD0 394 aa5.66□□□□□ -1.5
TRAPPC13-203ENST00000415825 CABP7Q86V35 215 aa5.66□□□□□ -1.5
TRAPPC13-203ENST00000415825 ADGRG2Q8IZP9 1017 aa5.66□□□□□ -1.5
TRAPPC13-203ENST00000415825 CARFQ8N187 725 aa5.66□□□□□ -1.5
TRAPPC13-203ENST00000415825 KISS1RQ969F8 398 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-203ENST00000415825 A0A1B0GTL3 188 aa5.65□□□□□ -1.5
TRAPPC13-203ENST00000415825 FAM221AA4D161 298 aa5.65□□□□□ -1.5
TRAPPC13-203ENST00000415825 SH3D21A4FU49 640 aa5.65□□□□□ -1.5
TRAPPC13-203ENST00000415825 C1QTNF3-AMACRE9PGA6 284 aa5.65□□□□□ -1.5
TRAPPC13-203ENST00000415825 F8W031 263 aaPredicted RBP5.65□□□□□ -1.5
TRAPPC13-203ENST00000415825 PF4P02776 101 aa5.65□□□□□ -1.5
TRAPPC13-203ENST00000415825 C6P13671 934 aa5.65□□□□□ -1.5
TRAPPC13-203ENST00000415825 KCNA1Q09470 495 aa5.65□□□□□ -1.5
TRAPPC13-203ENST00000415825 VWA3BQ502W6 1294 aa5.65□□□□□ -1.5
TRAPPC13-203ENST00000415825 ERICH6Q7L0X2 663 aa5.65□□□□□ -1.5
TRAPPC13-203ENST00000415825 C8orf49Q96NF6 230 aa5.65□□□□□ -1.5
TRAPPC13-203ENST00000415825 DUSP9Q99956 384 aaKnown RBP5.65□□□□□ -1.5
TRAPPC13-203ENST00000415825 MRIQ9BWK5 157 aa5.65□□□□□ -1.5
TRAPPC13-203ENST00000415825 LNPKQ9C0E8 428 aa5.65□□□□□ -1.5
TRAPPC13-203ENST00000415825 PRDM14Q9GZV8 571 aa5.65□□□□□ -1.5
TRAPPC13-203ENST00000415825 AP5S1Q9NUS5 200 aa5.65□□□□□ -1.5
TRAPPC13-203ENST00000415825 GMIPQ9P107 970 aa5.65□□□□□ -1.5
TRAPPC13-203ENST00000415825 PATL2C9JE40 543 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-203ENST00000415825 CYR61O00622 381 aa5.64□□□□□ -1.51
TRAPPC13-203ENST00000415825 SRGAP3O43295 1099 aa5.64□□□□□ -1.51
TRAPPC13-203ENST00000415825 ZNF205O95201 554 aa5.64□□□□□ -1.51
TRAPPC13-203ENST00000415825 SARSP49591 514 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-203ENST00000415825 PSMD2Q13200 908 aa5.64□□□□□ -1.51
TRAPPC13-203ENST00000415825 SNW1Q13573 536 aaKnown RBP5.64□□□□□ -1.51
TRAPPC13-203ENST00000415825 EAPPQ56P03 285 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-203ENST00000415825 CYP2R1Q6VVX0 501 aa5.64□□□□□ -1.51
TRAPPC13-203ENST00000415825 REC114Q7Z4M0 266 aa5.64□□□□□ -1.51
TRAPPC13-203ENST00000415825 ZNF526Q8TF50 670 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC13-203ENST00000415825 ALG3Q92685 438 aa5.64□□□□□ -1.51
TRAPPC13-203ENST00000415825 ZNF536O15090 1300 aa5.64□□□□□ -1.51
TRAPPC13-203ENST00000415825 SMARCA5O60264 1052 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 NOBOXO60393 691 aa5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 UBOX5O94941 541 aa5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 GSNP06396 782 aa5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 VAV1P15498 845 aa5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 ZNF20P17024 532 aa5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 TACR2P21452 398 aa5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 CCNFP41002 786 aa5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 XPCQ01831 940 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 KIAA2012Q0VF49 1180 aa5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 BORAQ6PGQ7 559 aa5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 GLB1LQ6UWU2 654 aa5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 DVL3Q92997 716 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 JMJD8Q96S16 334 aa5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 SLITRK6Q9H5Y7 841 aa5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 PDLIM7Q9NR12 457 aa5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 GFOD1Q9NXC2 390 aa5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 IVNS1ABPQ9Y6Y0 642 aa5.63□□□□□ -1.51
TRAPPC13-203ENST00000415825 FZD7O75084 574 aa5.62□□□□□ -1.51
TRAPPC13-203ENST00000415825 DBHP09172 617 aa5.62□□□□□ -1.51
TRAPPC13-203ENST00000415825 GSTM1P09488 218 aa5.62□□□□□ -1.51
TRAPPC13-203ENST00000415825 NOP2P46087 812 aaKnown RBP5.62□□□□□ -1.51
TRAPPC13-203ENST00000415825 PRR5P85299 388 aa5.62□□□□□ -1.51
TRAPPC13-203ENST00000415825 RBM10P98175 930 aaKnown RBP5.62□□□□□ -1.51
TRAPPC13-203ENST00000415825 GOLM1Q8NBJ4 401 aa5.62□□□□□ -1.51
TRAPPC13-203ENST00000415825 TMEM74Q96NL1 305 aa5.62□□□□□ -1.51
TRAPPC13-203ENST00000415825 CDK5RAP1Q96SZ6 601 aaKnown RBP5.62□□□□□ -1.51
TRAPPC13-203ENST00000415825 MENTQ9BUN1 341 aa5.62□□□□□ -1.51
TRAPPC13-203ENST00000415825 NUDT5Q9UKK9 219 aa5.62□□□□□ -1.51
TRAPPC13-203ENST00000415825 POLR3KQ9Y2Y1 108 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC13-203ENST00000415825 F6X3S4 739 aa5.61□□□□□ -1.51
TRAPPC13-203ENST00000415825 TBC1D8O95759 1140 aa5.61□□□□□ -1.51
TRAPPC13-203ENST00000415825 PLATP00750 562 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms