RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 ZNF444Q8N0Y2 327 aaPredicted RBP16.82■□□□□ 0.28
TTC39A-208ENST00000413473 CCDC148Q8NFR7 591 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 ZNF507Q8TCN5 953 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 LRRC15Q8TF66 581 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 HNRNPLLQ8WVV9 542 aaKnown RBP16.82■□□□□ 0.28
TTC39A-208ENST00000413473 TRIM47Q96LD4 638 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 CCSER1Q9C0I3 900 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 NARFQ9UHQ1 456 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 CTAGE15A4D2H0 777 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 POTEB2H3BUK9 544 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 STXBP3O00186 592 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 PSMA7O14818 248 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 RHOBTB3O94955 611 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 LDHBP07195 334 aaKnown RBP16.82■□□□□ 0.28
TTC39A-208ENST00000413473 CTAGE8P0CG41 777 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 GOLGA8HP0CJ92 632 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 TM4SF1P30408 202 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 STIM1Q13586 685 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 TPTE2Q6XPS3 522 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 CTAGE6Q86UF2 777 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 CTAGE4Q8IX94 777 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 GIMAP8Q8ND71 665 aaPredicted RBP16.82■□□□□ 0.28
TTC39A-208ENST00000413473 EEF2KMTQ96G04 330 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 BARHL2Q9NY43 387 aa16.82■□□□□ 0.28
TTC39A-208ENST00000413473 WHAMMP3Q1A5X7 153 aa16.81■□□□□ 0.28
TTC39A-208ENST00000413473 TMED8Q6PL24 325 aaPredicted RBP16.81■□□□□ 0.28
TTC39A-208ENST00000413473 SLC51AQ86UW1 340 aa16.81■□□□□ 0.28
TTC39A-208ENST00000413473 DAGLBQ8NCG7 672 aa16.81■□□□□ 0.28
TTC39A-208ENST00000413473 TGFBRAP1Q8WUH2 860 aa16.81■□□□□ 0.28
TTC39A-208ENST00000413473 TMEM47Q9BQJ4 181 aa16.81■□□□□ 0.28
TTC39A-208ENST00000413473 CPVLQ9H3G5 476 aa16.81■□□□□ 0.28
TTC39A-208ENST00000413473 THAP9Q9H5L6 903 aa16.81■□□□□ 0.28
TTC39A-208ENST00000413473 COL5A3P25940 1745 aaPredicted RBP16.81■□□□□ 0.28
TTC39A-208ENST00000413473 ROBO1Q9Y6N7 1651 aa16.81■□□□□ 0.28
TTC39A-208ENST00000413473 KDM4FA0A1W2PPD8 638 aa16.81■□□□□ 0.28
TTC39A-208ENST00000413473 A0A1W2PQC6 194 aa16.81■□□□□ 0.28
TTC39A-208ENST00000413473 TUBB4BP68371 445 aa16.81■□□□□ 0.28
TTC39A-208ENST00000413473 PIP4K2BP78356 416 aa16.81■□□□□ 0.28
TTC39A-208ENST00000413473 MCM6Q14566 821 aa16.81■□□□□ 0.28
TTC39A-208ENST00000413473 GRIK5Q16478 980 aa16.81■□□□□ 0.28
TTC39A-208ENST00000413473 GALNT17Q6IS24 598 aa16.81■□□□□ 0.28
TTC39A-208ENST00000413473 ABCB6Q9NP58 842 aa16.81■□□□□ 0.28
TTC39A-208ENST00000413473 MYO6Q9UM54 1294 aa16.81■□□□□ 0.28
TTC39A-208ENST00000413473 MYL1P05976 194 aa16.8■□□□□ 0.28
TTC39A-208ENST00000413473 AMPD2Q01433 879 aa16.8■□□□□ 0.28
TTC39A-208ENST00000413473 TTI2Q6NXR4 508 aa16.8■□□□□ 0.28
TTC39A-208ENST00000413473 WDR59Q6PJI9 974 aa16.8■□□□□ 0.28
TTC39A-208ENST00000413473 BARGINQ6ZT62 677 aa16.8■□□□□ 0.28
TTC39A-208ENST00000413473 PTF1AQ7RTS3 328 aa16.8■□□□□ 0.28
TTC39A-208ENST00000413473 DNAJC7Q99615 494 aa16.8■□□□□ 0.28
TTC39A-208ENST00000413473 MAGEC2Q9UBF1 373 aaPredicted RBP16.8■□□□□ 0.28
TTC39A-208ENST00000413473 CAPN11Q9UMQ6 739 aa16.8■□□□□ 0.28
TTC39A-208ENST00000413473 CNTNAP4Q9C0A0 1308 aa16.8■□□□□ 0.28
TTC39A-208ENST00000413473 IRS2Q9Y4H2 1338 aa16.8■□□□□ 0.28
TTC39A-208ENST00000413473 PALM3A6NDB9 673 aaPredicted RBP16.8■□□□□ 0.28
TTC39A-208ENST00000413473 ZPR1O75312 459 aa16.8■□□□□ 0.28
TTC39A-208ENST00000413473 GYS2P54840 703 aa16.8■□□□□ 0.28
TTC39A-208ENST00000413473 TSR1Q2NL82 804 aaKnown RBP16.8■□□□□ 0.28
TTC39A-208ENST00000413473 CCDC178Q5BJE1 867 aa16.8■□□□□ 0.28
TTC39A-208ENST00000413473 NCAPH2Q6IBW4 605 aa16.8■□□□□ 0.28
TTC39A-208ENST00000413473 SUGCTQ9HAC7 445 aa16.8■□□□□ 0.28
TTC39A-208ENST00000413473 ANKIB1Q9P2G1 1089 aa16.8■□□□□ 0.28
TTC39A-208ENST00000413473 TFR2Q9UP52 801 aa16.8■□□□□ 0.28
TTC39A-208ENST00000413473 H3BQF6 201 aa16.79■□□□□ 0.28
TTC39A-208ENST00000413473 AMOTL1Q8IY63 956 aa16.79■□□□□ 0.28
TTC39A-208ENST00000413473 CSGALNACT2Q8N6G5 542 aa16.79■□□□□ 0.28
TTC39A-208ENST00000413473 NOA1Q8NC60 698 aaKnown RBP16.79■□□□□ 0.28
TTC39A-208ENST00000413473 NEK11Q8NG66 645 aa16.79■□□□□ 0.28
TTC39A-208ENST00000413473 WDR66Q8TBY9 1149 aa16.79■□□□□ 0.28
TTC39A-208ENST00000413473 ZBTB9Q96C00 473 aa16.79■□□□□ 0.28
TTC39A-208ENST00000413473 TCP11L1Q9NUJ3 509 aa16.79■□□□□ 0.28
TTC39A-208ENST00000413473 SAP30BPQ9UHR5 308 aaKnown RBP16.79■□□□□ 0.28
TTC39A-208ENST00000413473 B4DLN1 442 aa16.79■□□□□ 0.28
TTC39A-208ENST00000413473 KLRF2D3W0D1 207 aa16.79■□□□□ 0.28
TTC39A-208ENST00000413473 LAD1O00515 517 aa16.79■□□□□ 0.28
TTC39A-208ENST00000413473 ERLIN1O75477 346 aa16.79■□□□□ 0.28
TTC39A-208ENST00000413473 PLCG1P19174 1290 aa16.79■□□□□ 0.28
TTC39A-208ENST00000413473 DNM2P50570 870 aa16.79■□□□□ 0.28
TTC39A-208ENST00000413473 VSNL1P62760 191 aa16.79■□□□□ 0.28
TTC39A-208ENST00000413473 MAPKAPK5Q8IW41 473 aa16.79■□□□□ 0.28
TTC39A-208ENST00000413473 DUSP9Q99956 384 aaKnown RBP16.79■□□□□ 0.28
TTC39A-208ENST00000413473 L1RE1Q9UN81 338 aa16.79■□□□□ 0.28
TTC39A-208ENST00000413473 ENC1O14682 589 aa16.78■□□□□ 0.28
TTC39A-208ENST00000413473 RGL2O15211 777 aa16.78■□□□□ 0.28
TTC39A-208ENST00000413473 BAG3O95817 575 aa16.78■□□□□ 0.28
TTC39A-208ENST00000413473 PRPHP41219 470 aa16.78■□□□□ 0.28
TTC39A-208ENST00000413473 TXNRD1Q16881 649 aa16.78■□□□□ 0.28
TTC39A-208ENST00000413473 LETM2Q2VYF4 491 aa16.78■□□□□ 0.28
TTC39A-208ENST00000413473 HDXQ7Z353 690 aa16.78■□□□□ 0.28
TTC39A-208ENST00000413473 CABP7Q86V35 215 aa16.78■□□□□ 0.28
TTC39A-208ENST00000413473 DHTKD1Q96HY7 919 aaPredicted RBP16.78■□□□□ 0.28
TTC39A-208ENST00000413473 TUBGCP2Q9BSJ2 902 aa16.78■□□□□ 0.28
TTC39A-208ENST00000413473 HAUS4Q9H6D7 363 aa16.78■□□□□ 0.28
TTC39A-208ENST00000413473 AGPAT5Q9NUQ2 364 aa16.78■□□□□ 0.28
TTC39A-208ENST00000413473 RPS6KA4O75676 772 aa16.78■□□□□ 0.28
TTC39A-208ENST00000413473 RASA1P20936 1047 aa16.78■□□□□ 0.28
TTC39A-208ENST00000413473 NT5C2P49902 561 aa16.78■□□□□ 0.28
TTC39A-208ENST00000413473 PDE11AQ9HCR9 933 aa16.78■□□□□ 0.28
TTC39A-208ENST00000413473 CALCOCO1Q9P1Z2 691 aa16.78■□□□□ 0.28
TTC39A-208ENST00000413473 CCNT1O60563 726 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms