RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.58□□□□□ -1.36
PMS1-203ENST00000409593 ARID1BQ8NFD5 2236 aaPredicted RBP6.58□□□□□ -1.36
PMS1-203ENST00000409593 ANKRD34BA5PLL1 514 aa6.58□□□□□ -1.36
PMS1-203ENST00000409593 B2RBV5 119 aa6.58□□□□□ -1.36
PMS1-203ENST00000409593 PSPNO60542 156 aa6.58□□□□□ -1.36
PMS1-203ENST00000409593 DDAH1O94760 285 aa6.58□□□□□ -1.36
PMS1-203ENST00000409593 KIR2DL1P43626 348 aaPredicted RBP6.58□□□□□ -1.36
PMS1-203ENST00000409593 KIR2DL2P43627 348 aaPredicted RBP6.58□□□□□ -1.36
PMS1-203ENST00000409593 NCAPHQ15003 741 aa6.58□□□□□ -1.36
PMS1-203ENST00000409593 NR0B2Q15466 257 aa6.58□□□□□ -1.36
PMS1-203ENST00000409593 RTP2Q5QGT7 225 aa6.58□□□□□ -1.36
PMS1-203ENST00000409593 DIRC2Q96SL1 478 aa6.58□□□□□ -1.36
PMS1-203ENST00000409593 FAM53CQ9NYF3 392 aa6.58□□□□□ -1.36
PMS1-203ENST00000409593 A0A087WZG4 1122 aa6.57□□□□□ -1.36
PMS1-203ENST00000409593 NAT2P11245 290 aa6.57□□□□□ -1.36
PMS1-203ENST00000409593 IFNGR1P15260 489 aa6.57□□□□□ -1.36
PMS1-203ENST00000409593 NOP2P46087 812 aaKnown RBP6.57□□□□□ -1.36
PMS1-203ENST00000409593 RTP1P59025 263 aa6.57□□□□□ -1.36
PMS1-203ENST00000409593 DPY19L1Q2PZI1 675 aa6.57□□□□□ -1.36
PMS1-203ENST00000409593 PRR23BQ6ZRT6 265 aa6.57□□□□□ -1.36
PMS1-203ENST00000409593 SIRT2Q8IXJ6 389 aa6.57□□□□□ -1.36
PMS1-203ENST00000409593 HNRNPLLQ8WVV9 542 aaKnown RBP6.57□□□□□ -1.36
PMS1-203ENST00000409593 GMLQ99445 158 aa6.57□□□□□ -1.36
PMS1-203ENST00000409593 APEX2Q9UBZ4 518 aa6.57□□□□□ -1.36
PMS1-203ENST00000409593 CGGBP1Q9UFW8 167 aaPredicted RBP6.57□□□□□ -1.36
PMS1-203ENST00000409593 DIS3Q9Y2L1 958 aaKnown RBP6.57□□□□□ -1.36
PMS1-203ENST00000409593 STXBP3O00186 592 aa6.56□□□□□ -1.36
PMS1-203ENST00000409593 YBX3P16989 372 aaKnown RBP eCLIP6.56□□□□□ -1.36
PMS1-203ENST00000409593 FXNQ16595 210 aa6.56□□□□□ -1.36
PMS1-203ENST00000409593 FAM178BQ8IXR5 827 aa6.56□□□□□ -1.36
PMS1-203ENST00000409593 NSUN3Q9H649 340 aaKnown RBP6.56□□□□□ -1.36
PMS1-203ENST00000409593 CWC22Q9HCG8 908 aaKnown RBP6.56□□□□□ -1.36
PMS1-203ENST00000409593 TNFRSF10DQ9UBN6 386 aa6.56□□□□□ -1.36
PMS1-203ENST00000409593 SUSD2Q9UGT4 822 aa6.56□□□□□ -1.36
PMS1-203ENST00000409593 TAF6LQ9Y6J9 622 aa6.56□□□□□ -1.36
PMS1-203ENST00000409593 FADS2P1A8MWK0 482 aa6.55□□□□□ -1.36
PMS1-203ENST00000409593 NRDCO43847 1150 aa6.55□□□□□ -1.36
PMS1-203ENST00000409593 VAMP4O75379 141 aa6.55□□□□□ -1.36
PMS1-203ENST00000409593 ANKS3Q6ZW76 656 aa6.55□□□□□ -1.36
PMS1-203ENST00000409593 FCRL3Q96P31 734 aaPredicted RBP6.55□□□□□ -1.36
PMS1-203ENST00000409593 APBA2Q99767 749 aa6.55□□□□□ -1.36
PMS1-203ENST00000409593 AKT3Q9Y243 479 aa6.55□□□□□ -1.36
PMS1-203ENST00000409593 AMPD2Q01433 879 aa6.55□□□□□ -1.36
PMS1-203ENST00000409593 ZNF648Q5T619 568 aaPredicted RBP6.55□□□□□ -1.36
PMS1-203ENST00000409593 INTS4Q96HW7 963 aaKnown RBP6.55□□□□□ -1.36
PMS1-203ENST00000409593 TANGO6Q9C0B7 1094 aa6.55□□□□□ -1.36
PMS1-203ENST00000409593 SLC6A17Q9H1V8 727 aa6.55□□□□□ -1.36
PMS1-203ENST00000409593 EPB41L4BQ9H329 900 aa6.55□□□□□ -1.36
PMS1-203ENST00000409593 YBX2Q9Y2T7 364 aaKnown RBP6.55□□□□□ -1.36
PMS1-203ENST00000409593 NOTOA8MTQ0 251 aa6.54□□□□□ -1.36
PMS1-203ENST00000409593 FARP2O94887 1054 aaPredicted RBP6.54□□□□□ -1.36
PMS1-203ENST00000409593 EFEMP2O95967 443 aa6.54□□□□□ -1.36
PMS1-203ENST00000409593 PDE6BP35913 854 aa6.54□□□□□ -1.36
PMS1-203ENST00000409593 SNX17Q15036 470 aa6.54□□□□□ -1.36
PMS1-203ENST00000409593 HSF5Q4G112 596 aaPredicted RBP6.54□□□□□ -1.36
PMS1-203ENST00000409593 ARHGEF39Q8N4T4 335 aa6.54□□□□□ -1.36
PMS1-203ENST00000409593 CRACR2BQ8N4Y2 399 aaPredicted RBP6.54□□□□□ -1.36
PMS1-203ENST00000409593 MICAL1Q8TDZ2 1067 aa6.54□□□□□ -1.36
PMS1-203ENST00000409593 RCC1LQ96I51 464 aaKnown RBP6.54□□□□□ -1.36
PMS1-203ENST00000409593 PLCD4Q9BRC7 762 aa6.54□□□□□ -1.36
PMS1-203ENST00000409593 MCMBPQ9BTE3 642 aa6.54□□□□□ -1.36
PMS1-203ENST00000409593 ST7Q9NRC1 585 aa6.54□□□□□ -1.36
PMS1-203ENST00000409593 NOP56O00567 594 aaKnown RBP6.53□□□□□ -1.36
PMS1-203ENST00000409593 FGF10O15520 208 aaPredicted RBP6.53□□□□□ -1.36
PMS1-203ENST00000409593 STK10O94804 968 aaKnown RBP6.53□□□□□ -1.36
PMS1-203ENST00000409593 KCNH1O95259 989 aa6.53□□□□□ -1.36
PMS1-203ENST00000409593 ZNF143P52747 638 aaPredicted RBP6.53□□□□□ -1.36
PMS1-203ENST00000409593 SV2CQ496J9 727 aa6.53□□□□□ -1.36
PMS1-203ENST00000409593 ADGRF1Q5T601 910 aa6.53□□□□□ -1.36
PMS1-203ENST00000409593 GALNT18Q6P9A2 607 aa6.53□□□□□ -1.36
PMS1-203ENST00000409593 CYP2R1Q6VVX0 501 aa6.53□□□□□ -1.36
PMS1-203ENST00000409593 SLCO6A1Q86UG4 719 aa6.53□□□□□ -1.36
PMS1-203ENST00000409593 NLRX1Q86UT6 975 aa6.53□□□□□ -1.36
PMS1-203ENST00000409593 JAMLQ86YT9 394 aa6.53□□□□□ -1.36
PMS1-203ENST00000409593 POU5F2Q8N7G0 328 aa6.53□□□□□ -1.36
PMS1-203ENST00000409593 BVESQ8NE79 360 aa6.53□□□□□ -1.36
PMS1-203ENST00000409593 LGR4Q9BXB1 951 aa6.53□□□□□ -1.36
PMS1-203ENST00000409593 DCP1AQ9NPI6 582 aaPredicted RBP6.53□□□□□ -1.36
PMS1-203ENST00000409593 LRP2BPQ9P2M1 347 aa6.53□□□□□ -1.36
PMS1-203ENST00000409593 PPP1R1BQ9UD71 204 aaPredicted RBP6.53□□□□□ -1.36
PMS1-203ENST00000409593 A0A1W2PQ27 194 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 A0A1W2PQ64 194 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 A0A1W2PQC6 194 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 A0A1W2PQD8 194 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 WTIPA6NIX2 430 aaPredicted RBP6.52□□□□□ -1.37
PMS1-203ENST00000409593 SUSD5O60279 629 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 GJB6O95452 261 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 SEPHS1P49903 392 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 GRB10Q13322 594 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 KIR3DS1Q14943 382 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 HLA-DQA1Q5Y7H0 255 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 MRM1Q6IN84 353 aaKnown RBP6.52□□□□□ -1.37
PMS1-203ENST00000409593 POMZP3Q6PJE2 187 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 KSR1Q8IVT5 923 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 CELF2-AS1Q8N7Q2 184 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 NUP43Q8NFH3 380 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 SHISA4Q96DD7 197 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 PTCHD1Q96NR3 888 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 JMJD8Q96S16 334 aa6.52□□□□□ -1.37
PMS1-203ENST00000409593 SLC38A3Q99624 504 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms