RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 INF2Q27J81 1249 aa29.26■■■□□ 2.28
CPNE1-205ENST00000401607 BTNL9Q6UXG8 535 aa29.26■■■□□ 2.28
CPNE1-205ENST00000401607 SPICE1Q8N0Z3 855 aa29.26■■■□□ 2.28
CPNE1-205ENST00000401607 TMEM232C9JQI7 657 aa29.26■■■□□ 2.27
CPNE1-205ENST00000401607 MCM7P33993 719 aa29.26■■■□□ 2.27
CPNE1-205ENST00000401607 EPS15P42566 896 aa29.26■■■□□ 2.27
CPNE1-205ENST00000401607 ADCY7P51828 1080 aa29.26■■■□□ 2.27
CPNE1-205ENST00000401607 CDC37Q16543 378 aaPredicted RBP29.26■■■□□ 2.27
CPNE1-205ENST00000401607 ILDR2Q71H61 639 aa29.26■■■□□ 2.27
CPNE1-205ENST00000401607 CSRNP2Q9H175 543 aa29.26■■■□□ 2.27
CPNE1-205ENST00000401607 NBPF12Q5TAG4 269 aaPredicted RBP29.25■■■□□ 2.27
CPNE1-205ENST00000401607 APOBEC3FQ8IUX4 373 aaKnown RBP29.25■■■□□ 2.27
CPNE1-205ENST00000401607 REXO1Q8N1G1 1221 aaKnown RBP29.25■■■□□ 2.27
CPNE1-205ENST00000401607 TIGD1Q96MW7 591 aa29.25■■■□□ 2.27
CPNE1-205ENST00000401607 GOPCQ9HD26 462 aa29.25■■■□□ 2.27
CPNE1-205ENST00000401607 HIRAP54198 1017 aaPredicted RBP29.24■■■□□ 2.27
CPNE1-205ENST00000401607 SYDE2Q5VT97 1194 aa29.24■■■□□ 2.27
CPNE1-205ENST00000401607 CCDC84Q86UT8 332 aaPredicted RBP29.24■■■□□ 2.27
CPNE1-205ENST00000401607 C4orf32Q8N8J7 132 aa29.24■■■□□ 2.27
CPNE1-205ENST00000401607 FERMT2Q96AC1 680 aa29.24■■■□□ 2.27
CPNE1-205ENST00000401607 GLIS2Q9BZE0 524 aaPredicted RBP29.24■■■□□ 2.27
CPNE1-205ENST00000401607 RNF181Q9P0P0 153 aa29.24■■■□□ 2.27
CPNE1-205ENST00000401607 BIN2Q9UBW5 565 aaPredicted RBP29.24■■■□□ 2.27
CPNE1-205ENST00000401607 KCNH3Q9ULD8 1083 aa29.24■■■□□ 2.27
CPNE1-205ENST00000401607 NONOQ15233 471 aaKnown RBP eCLIP29.24■■■□□ 2.27
CPNE1-205ENST00000401607 SDF4Q9BRK5 362 aa29.24■■■□□ 2.27
CPNE1-205ENST00000401607 VCPKMTQ9H867 229 aa29.24■■■□□ 2.27
CPNE1-205ENST00000401607 RIC8AQ9NPQ8 531 aa29.24■■■□□ 2.27
CPNE1-205ENST00000401607 TMEM260Q9NX78 707 aa29.24■■■□□ 2.27
CPNE1-205ENST00000401607 DDNO94850 711 aaPredicted RBP29.23■■■□□ 2.27
CPNE1-205ENST00000401607 JAKMIP3Q5VZ66 844 aa29.23■■■□□ 2.27
CPNE1-205ENST00000401607 FAM13BQ9NYF5 915 aa29.23■■■□□ 2.27
CPNE1-205ENST00000401607 SASS6Q6UVJ0 657 aa29.22■■■□□ 2.27
CPNE1-205ENST00000401607 SH2D4AQ9H788 454 aa29.22■■■□□ 2.27
CPNE1-205ENST00000401607 GGA3Q9NZ52 723 aa29.22■■■□□ 2.27
CPNE1-205ENST00000401607 USP49Q70CQ1 688 aa29.21■■■□□ 2.27
CPNE1-205ENST00000401607 IKQ13123 557 aaPredicted RBP29.21■■■□□ 2.27
CPNE1-205ENST00000401607 FAM83BQ5T0W9 1011 aa29.21■■■□□ 2.27
CPNE1-205ENST00000401607 ERCC4Q92889 916 aaPredicted RBP29.21■■■□□ 2.27
CPNE1-205ENST00000401607 CLK2P49760 499 aaKnown RBP29.2■■■□□ 2.26
CPNE1-205ENST00000401607 SNAP25P60880 206 aa29.2■■■□□ 2.26
CPNE1-205ENST00000401607 IL17AQ16552 155 aa29.2■■■□□ 2.26
CPNE1-205ENST00000401607 GINM1Q9NU53 330 aa29.2■■■□□ 2.26
CPNE1-205ENST00000401607 PRR12Q9ULL5 1215 aa29.2■■■□□ 2.26
CPNE1-205ENST00000401607 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.19■■■□□ 2.26
CPNE1-205ENST00000401607 CTNND1O60716 968 aaKnown RBP29.19■■■□□ 2.26
CPNE1-205ENST00000401607 ZYXQ15942 572 aaKnown RBP29.19■■■□□ 2.26
CPNE1-205ENST00000401607 TBCKQ8TEA7 893 aa29.19■■■□□ 2.26
CPNE1-205ENST00000401607 CUL5Q93034 780 aa29.19■■■□□ 2.26
CPNE1-205ENST00000401607 PCDHA1Q9Y5I3 950 aa29.19■■■□□ 2.26
CPNE1-205ENST00000401607 VWA3AA6NCI4 1184 aa29.18■■■□□ 2.26
CPNE1-205ENST00000401607 STAT2P52630 851 aa29.18■■■□□ 2.26
CPNE1-205ENST00000401607 LONRF3Q496Y0 759 aa29.18■■■□□ 2.26
CPNE1-205ENST00000401607 ARL6IP4Q66PJ3 421 aaKnown RBP29.18■■■□□ 2.26
CPNE1-205ENST00000401607 NEK8Q86SG6 692 aa29.18■■■□□ 2.26
CPNE1-205ENST00000401607 UBE2SQ16763 222 aa29.18■■■□□ 2.26
CPNE1-205ENST00000401607 ANO6Q4KMQ2 910 aa29.18■■■□□ 2.26
CPNE1-205ENST00000401607 PRAMEF18Q5VWM3 479 aa29.18■■■□□ 2.26
CPNE1-205ENST00000401607 C9orf131Q5VYM1 1079 aa29.18■■■□□ 2.26
CPNE1-205ENST00000401607 DCAF15Q66K64 600 aa29.18■■■□□ 2.26
CPNE1-205ENST00000401607 KRBA2Q6ZNG9 492 aa29.18■■■□□ 2.26
CPNE1-205ENST00000401607 AMNQ9BXJ7 453 aa29.18■■■□□ 2.26
CPNE1-205ENST00000401607 ZNF341Q9BYN7 854 aa29.18■■■□□ 2.26
CPNE1-205ENST00000401607 TMEM60Q9H2L4 133 aa29.18■■■□□ 2.26
CPNE1-205ENST00000401607 UTRNP46939 3433 aa29.18■■■□□ 2.26
CPNE1-205ENST00000401607 INPP5BP32019 993 aa29.17■■■□□ 2.26
CPNE1-205ENST00000401607 MRPL12P52815 198 aaKnown RBP29.17■■■□□ 2.26
CPNE1-205ENST00000401607 EPSTI1Q96J88 318 aa29.17■■■□□ 2.26
CPNE1-205ENST00000401607 PSTPIP2Q9H939 334 aa29.17■■■□□ 2.26
CPNE1-205ENST00000401607 KIAA1468Q9P260 1216 aa29.17■■■□□ 2.26
CPNE1-205ENST00000401607 DOCK1Q14185 1865 aa29.17■■■□□ 2.26
CPNE1-205ENST00000401607 LETM2Q2VYF4 491 aa29.16■■■□□ 2.26
CPNE1-205ENST00000401607 SYMPKQ92797 1274 aaKnown RBP29.16■■■□□ 2.26
CPNE1-205ENST00000401607 ZNF112Q9UJU3 913 aa29.16■■■□□ 2.26
CPNE1-205ENST00000401607 UVSSAQ2YD98 709 aa29.16■■■□□ 2.26
CPNE1-205ENST00000401607 FBXO11Q86XK2 927 aa29.16■■■□□ 2.26
CPNE1-205ENST00000401607 PPP2R3BQ9Y5P8 575 aa29.16■■■□□ 2.26
CPNE1-205ENST00000401607 SSC5DA1L4H1 1573 aa29.15■■■□□ 2.26
CPNE1-205ENST00000401607 POLR2DO15514 142 aaKnown RBP29.15■■■□□ 2.26
CPNE1-205ENST00000401607 EDIL3O43854 480 aa29.15■■■□□ 2.26
CPNE1-205ENST00000401607 CNNM3Q8NE01 707 aa29.15■■■□□ 2.26
CPNE1-205ENST00000401607 FAM200AQ8TCP9 573 aa29.15■■■□□ 2.26
CPNE1-205ENST00000401607 HOOK2Q96ED9 719 aa29.15■■■□□ 2.26
CPNE1-205ENST00000401607 A0A087X0B3 334 aa29.14■■■□□ 2.26
CPNE1-205ENST00000401607 CCNT1O60563 726 aaKnown RBP29.14■■■□□ 2.26
CPNE1-205ENST00000401607 PLA2G6O60733 806 aa29.14■■■□□ 2.26
CPNE1-205ENST00000401607 STX1AQ16623 288 aa29.14■■■□□ 2.26
CPNE1-205ENST00000401607 FEZ1Q99689 392 aa29.14■■■□□ 2.26
CPNE1-205ENST00000401607 DNAJC25Q9H1X3 360 aa29.14■■■□□ 2.26
CPNE1-205ENST00000401607 ADARB2Q9NS39 739 aaKnown RBP29.14■■■□□ 2.26
CPNE1-205ENST00000401607 A0A087WWV3 80 aa29.13■■■□□ 2.25
CPNE1-205ENST00000401607 ELOA2Q8IYF1 753 aaPredicted RBP29.13■■■□□ 2.25
CPNE1-205ENST00000401607 GLT8D2Q9H1C3 349 aa29.13■■■□□ 2.25
CPNE1-205ENST00000401607 SERTAD1Q9UHV2 236 aa29.13■■■□□ 2.25
CPNE1-205ENST00000401607 LAD1O00515 517 aa29.13■■■□□ 2.25
CPNE1-205ENST00000401607 LMOD1P29536 600 aaPredicted RBP29.13■■■□□ 2.25
CPNE1-205ENST00000401607 ORC2Q13416 577 aaPredicted RBP29.13■■■□□ 2.25
CPNE1-205ENST00000401607 CHURC1Q8WUH1 139 aa29.13■■■□□ 2.25
CPNE1-205ENST00000401607 KIAA1683Q9H0B3 1180 aa29.13■■■□□ 2.25
CPNE1-205ENST00000401607 PITPNM2Q9BZ72 1349 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms