RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 AGPAT5Q9NUQ2 364 aa16.35■□□□□ 0.21
CCDC144A-205ENST00000399264 B4DLN1 442 aa16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 RPS6KA4O75676 772 aa16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 PLCG1P19174 1290 aa16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 ITIH6Q6UXX5 1313 aa16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 NOA1Q8NC60 698 aaKnown RBP16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 ARFGAP3Q9NP61 516 aa16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 NRAPQ86VF7 1730 aa16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 COL22A1Q8NFW1 1626 aaPredicted RBP16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 OAS2P29728 719 aaKnown RBP16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 STK4Q13043 487 aa16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 LONRF2Q1L5Z9 754 aa16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 WDR59Q6PJI9 974 aa16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 CLEC10AQ8IUN9 316 aa16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 TMTC1Q8IUR5 882 aa16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 TRIM47Q96LD4 638 aa16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 NYXQ9GZU5 481 aa16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 BARHL2Q9NY43 387 aa16.34■□□□□ 0.21
CCDC144A-205ENST00000399264 CCNT1O60563 726 aaKnown RBP16.33■□□□□ 0.21
CCDC144A-205ENST00000399264 FECHP22830 423 aa16.33■□□□□ 0.21
CCDC144A-205ENST00000399264 SMC1AQ14683 1233 aaKnown RBP16.33■□□□□ 0.21
CCDC144A-205ENST00000399264 C8orf37Q96NL8 207 aa16.33■□□□□ 0.21
CCDC144A-205ENST00000399264 UIMC1Q96RL1 719 aa16.33■□□□□ 0.21
CCDC144A-205ENST00000399264 TMEM260Q9NX78 707 aa16.33■□□□□ 0.21
CCDC144A-205ENST00000399264 LAMB1P07942 1786 aa16.33■□□□□ 0.21
CCDC144A-205ENST00000399264 CNTNAP4Q9C0A0 1308 aa16.33■□□□□ 0.2
CCDC144A-205ENST00000399264 CTAGE9A4FU28 777 aa16.33■□□□□ 0.2
CCDC144A-205ENST00000399264 PALM3A6NDB9 673 aaPredicted RBP16.33■□□□□ 0.2
CCDC144A-205ENST00000399264 RASSF10A6NK89 507 aa16.33■□□□□ 0.2
CCDC144A-205ENST00000399264 H3BQF6 201 aa16.33■□□□□ 0.2
CCDC144A-205ENST00000399264 SRGAP2O75044 1071 aa16.33■□□□□ 0.2
CCDC144A-205ENST00000399264 TECP42680 631 aa16.33■□□□□ 0.2
CCDC144A-205ENST00000399264 CYP26C1Q6V0L0 522 aa16.33■□□□□ 0.2
CCDC144A-205ENST00000399264 MB21D1Q8N884 522 aa16.33■□□□□ 0.2
CCDC144A-205ENST00000399264 DUSP9Q99956 384 aaKnown RBP16.33■□□□□ 0.2
CCDC144A-205ENST00000399264 KBTBD4Q9NVX7 518 aa16.33■□□□□ 0.2
CCDC144A-205ENST00000399264 EPN1Q9Y6I3 576 aaPredicted RBP16.33■□□□□ 0.2
CCDC144A-205ENST00000399264 CCDC88AQ3V6T2 1871 aa16.33■□□□□ 0.2
CCDC144A-205ENST00000399264 TPM1P09493 284 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 SLURP2P0DP57 97 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 JAKMIP3Q5VZ66 844 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 NEK11Q8NG66 645 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 UBXN6Q9BZV1 441 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 BIN2Q9UBW5 565 aaPredicted RBP16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 DUSP10Q9Y6W6 482 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 RCCD1A6NED2 376 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 NDUFA10O95299 355 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 NAPAP54920 295 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 MCM6Q14566 821 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 CCDC178Q5BJE1 867 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 ZNF507Q8TCN5 953 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 RMND1Q9NWS8 449 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 CCNL1Q9UK58 526 aaPredicted RBP16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 SRCAPQ6ZRS2 3230 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 FLT1P17948 1338 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 H7C1D1 291 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 ANKRD40Q6AI12 368 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 TTI2Q6NXR4 508 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 HINFPQ9BQA5 517 aa16.32■□□□□ 0.2
CCDC144A-205ENST00000399264 BTDP43251 543 aa16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 CDK8P49336 464 aa16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 EIF6P56537 245 aaKnown RBP16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 GJA10Q969M2 543 aa16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 CCDC51Q96ER9 411 aa16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 PIGSQ96S52 555 aa16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 RTFDC1Q9BY42 306 aaPredicted RBP16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 SH3GLB2Q9NR46 395 aa16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 TTF2Q9UNY4 1162 aaKnown RBP16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 RTCBQ9Y3I0 505 aaKnown RBP16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 PDS5AQ29RF7 1337 aaKnown RBP16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 SMCO2A6NFE2 343 aa16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 LGALS16A8MUM7 142 aa16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 N4BP1O75113 896 aaKnown RBP16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 HERVK_113P62684 666 aa16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 VSNL1P62760 191 aa16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 SPTY2D1Q68D10 685 aaPredicted RBP16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 CABP7Q86V35 215 aa16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 CSGALNACT2Q8N6G5 542 aa16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 GIMAP8Q8ND71 665 aaPredicted RBP16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 ANKRD20A12PQ8NF67 263 aa16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 ANKS1AQ92625 1134 aa16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 EYA3Q99504 573 aa16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 NAPGQ99747 312 aaPredicted RBP16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 ABCB6Q9NP58 842 aa16.31■□□□□ 0.2
CCDC144A-205ENST00000399264 FRMPD2Q68DX3 1309 aaPredicted RBP16.3■□□□□ 0.2
CCDC144A-205ENST00000399264 USP17L5A8MUK1 530 aa16.3■□□□□ 0.2
CCDC144A-205ENST00000399264 GPSM2P81274 684 aa16.3■□□□□ 0.2
CCDC144A-205ENST00000399264 CYP27A1Q02318 531 aa16.3■□□□□ 0.2
CCDC144A-205ENST00000399264 SPAG1Q07617 926 aa16.3■□□□□ 0.2
CCDC144A-205ENST00000399264 CEP95Q96GE4 821 aa16.3■□□□□ 0.2
CCDC144A-205ENST00000399264 MMTAG2Q9BU76 263 aaKnown RBP16.3■□□□□ 0.2
CCDC144A-205ENST00000399264 LACRTQ9GZZ8 138 aa16.3■□□□□ 0.2
CCDC144A-205ENST00000399264 LUC7L2Q9Y383 392 aaKnown RBP16.3■□□□□ 0.2
CCDC144A-205ENST00000399264 TNRC6CQ9HCJ0 1690 aaKnown RBP16.3■□□□□ 0.2
CCDC144A-205ENST00000399264 PDE4DQ08499 809 aa16.3■□□□□ 0.2
CCDC144A-205ENST00000399264 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
CCDC144A-205ENST00000399264 OR8K1Q8NGG5 319 aa16.3■□□□□ 0.2
CCDC144A-205ENST00000399264 WDR66Q8TBY9 1149 aa16.3■□□□□ 0.2
CCDC144A-205ENST00000399264 AHDC1Q5TGY3 1603 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms