RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 SNAP25P60880 206 aa20.42■□□□□ 0.86
CLDND1-204ENST00000394185 SPICE1Q8N0Z3 855 aa20.42■□□□□ 0.86
CLDND1-204ENST00000394185 DHX58Q96C10 678 aa20.42■□□□□ 0.86
CLDND1-204ENST00000394185 PCDHA5Q9Y5H7 936 aa20.42■□□□□ 0.86
CLDND1-204ENST00000394185 CEP57L1Q8IYX8 460 aa20.41■□□□□ 0.86
CLDND1-204ENST00000394185 REXO1Q8N1G1 1221 aaKnown RBP20.41■□□□□ 0.86
CLDND1-204ENST00000394185 MTMR8Q96EF0 704 aa20.41■□□□□ 0.86
CLDND1-204ENST00000394185 ASTN2O75129 1339 aaPredicted RBP20.41■□□□□ 0.86
CLDND1-204ENST00000394185 ZBTB5O15062 677 aa20.41■□□□□ 0.86
CLDND1-204ENST00000394185 LETM2Q2VYF4 491 aa20.41■□□□□ 0.86
CLDND1-204ENST00000394185 PPP4R3BQ5MIZ7 849 aa20.41■□□□□ 0.86
CLDND1-204ENST00000394185 AOPEPQ8N6M6 819 aa20.41■□□□□ 0.86
CLDND1-204ENST00000394185 ACER1Q8TDN7 264 aa20.41■□□□□ 0.86
CLDND1-204ENST00000394185 PGAP2Q9UHJ9 254 aa20.41■□□□□ 0.86
CLDND1-204ENST00000394185 ESYT2A0FGR8 921 aa20.4■□□□□ 0.86
CLDND1-204ENST00000394185 ESPNB1AK53 854 aa20.4■□□□□ 0.86
CLDND1-204ENST00000394185 CAVIN2O95810 425 aa20.4■□□□□ 0.86
CLDND1-204ENST00000394185 NLRP12P59046 1061 aa20.4■□□□□ 0.86
CLDND1-204ENST00000394185 POSTNQ15063 836 aa20.4■□□□□ 0.86
CLDND1-204ENST00000394185 ZRSR1Q15695 479 aaKnown RBP20.4■□□□□ 0.86
CLDND1-204ENST00000394185 UBE2SQ16763 222 aa20.4■□□□□ 0.86
CLDND1-204ENST00000394185 KIAA1755Q5JYT7 1200 aa20.4■□□□□ 0.86
CLDND1-204ENST00000394185 FAM177A1Q8N128 213 aaPredicted RBP20.4■□□□□ 0.86
CLDND1-204ENST00000394185 TBCKQ8TEA7 893 aa20.4■□□□□ 0.86
CLDND1-204ENST00000394185 DCAF4Q8WV16 495 aa20.4■□□□□ 0.86
CLDND1-204ENST00000394185 BMP6P22004 513 aa20.39■□□□□ 0.86
CLDND1-204ENST00000394185 CASP1P29466 404 aa20.39■□□□□ 0.86
CLDND1-204ENST00000394185 NONOQ15233 471 aaKnown RBP eCLIP20.39■□□□□ 0.86
CLDND1-204ENST00000394185 SAMD7Q7Z3H4 446 aa20.39■□□□□ 0.86
CLDND1-204ENST00000394185 KRT25Q7Z3Z0 450 aa20.39■□□□□ 0.86
CLDND1-204ENST00000394185 GJA3Q9Y6H8 435 aa20.39■□□□□ 0.86
CLDND1-204ENST00000394185 MYO1BO43795 1136 aa20.39■□□□□ 0.85
CLDND1-204ENST00000394185 CCNT1O60563 726 aaKnown RBP20.39■□□□□ 0.85
CLDND1-204ENST00000394185 TAL1P17542 331 aaPredicted RBP20.39■□□□□ 0.85
CLDND1-204ENST00000394185 ADCY7P51828 1080 aa20.39■□□□□ 0.85
CLDND1-204ENST00000394185 TNIP1Q15025 636 aa20.39■□□□□ 0.85
CLDND1-204ENST00000394185 QRICH1Q2TAL8 776 aa20.39■□□□□ 0.85
CLDND1-204ENST00000394185 FKBP1CQ5VVH2 108 aa20.39■□□□□ 0.85
CLDND1-204ENST00000394185 GMCL1P1Q8NEA9 526 aa20.39■□□□□ 0.85
CLDND1-204ENST00000394185 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.39■□□□□ 0.85
CLDND1-204ENST00000394185 PP2D1A8MPX8 630 aa20.38■□□□□ 0.85
CLDND1-204ENST00000394185 hCG_1984214I3L0E3 225 aa20.38■□□□□ 0.85
CLDND1-204ENST00000394185 EDIL3O43854 480 aa20.38■□□□□ 0.85
CLDND1-204ENST00000394185 GMPSP49915 693 aaPredicted RBP20.38■□□□□ 0.85
CLDND1-204ENST00000394185 CCDC84Q86UT8 332 aaPredicted RBP20.38■□□□□ 0.85
CLDND1-204ENST00000394185 FAM83AQ86UY5 434 aa20.38■□□□□ 0.85
CLDND1-204ENST00000394185 FAM43AQ8N2R8 423 aa20.38■□□□□ 0.85
CLDND1-204ENST00000394185 ZNF713Q8N859 430 aaPredicted RBP20.38■□□□□ 0.85
CLDND1-204ENST00000394185 ZBTB21Q9ULJ3 1066 aa20.38■□□□□ 0.85
CLDND1-204ENST00000394185 BECN2A8MW95 431 aa20.38■□□□□ 0.85
CLDND1-204ENST00000394185 MICALL2Q8IY33 904 aa20.38■□□□□ 0.85
CLDND1-204ENST00000394185 GOLGA6L19H0YKK7 550 aa20.37■□□□□ 0.85
CLDND1-204ENST00000394185 PTMAP06454 111 aaKnown RBP20.37■□□□□ 0.85
CLDND1-204ENST00000394185 AFMP43652 599 aa20.37■□□□□ 0.85
CLDND1-204ENST00000394185 ZNF280AP59817 542 aaPredicted RBP20.37■□□□□ 0.85
CLDND1-204ENST00000394185 RASA3Q14644 834 aa20.37■□□□□ 0.85
CLDND1-204ENST00000394185 CDC37Q16543 378 aaPredicted RBP20.37■□□□□ 0.85
CLDND1-204ENST00000394185 TBC1D10BQ4KMP7 808 aaPredicted RBP20.37■□□□□ 0.85
CLDND1-204ENST00000394185 ARL6IP4Q66PJ3 421 aaKnown RBP20.37■□□□□ 0.85
CLDND1-204ENST00000394185 NEK8Q86SG6 692 aa20.37■□□□□ 0.85
CLDND1-204ENST00000394185 SPC24Q8NBT2 197 aa20.37■□□□□ 0.85
CLDND1-204ENST00000394185 STAMQ92783 540 aa20.37■□□□□ 0.85
CLDND1-204ENST00000394185 TMEM232C9JQI7 657 aa20.36■□□□□ 0.85
CLDND1-204ENST00000394185 GMCL1Q96IK5 515 aa20.36■□□□□ 0.85
CLDND1-204ENST00000394185 GLIS2Q9BZE0 524 aaPredicted RBP20.36■□□□□ 0.85
CLDND1-204ENST00000394185 RIC8AQ9NPQ8 531 aa20.36■□□□□ 0.85
CLDND1-204ENST00000394185 ZNF541Q9H0D2 1346 aa20.36■□□□□ 0.85
CLDND1-204ENST00000394185 ARFGEF1Q9Y6D6 1849 aa20.36■□□□□ 0.85
CLDND1-204ENST00000394185 FZD9O00144 591 aa20.36■□□□□ 0.85
CLDND1-204ENST00000394185 E2F4Q16254 413 aa20.36■□□□□ 0.85
CLDND1-204ENST00000394185 ZNF830Q96NB3 372 aaPredicted RBP20.36■□□□□ 0.85
CLDND1-204ENST00000394185 NAT10Q9H0A0 1025 aaKnown RBP20.36■□□□□ 0.85
CLDND1-204ENST00000394185 MAN1B1Q9UKM7 699 aa20.36■□□□□ 0.85
CLDND1-204ENST00000394185 LTBP3Q9NS15 1303 aa20.36■□□□□ 0.85
CLDND1-204ENST00000394185 SLFN14P0C7P3 912 aa20.35■□□□□ 0.85
CLDND1-204ENST00000394185 IKQ13123 557 aaPredicted RBP20.35■□□□□ 0.85
CLDND1-204ENST00000394185 ELOA2Q8IYF1 753 aaPredicted RBP20.35■□□□□ 0.85
CLDND1-204ENST00000394185 PAGE5Q96GU1 130 aa20.35■□□□□ 0.85
CLDND1-204ENST00000394185 TRIM5Q9C035 493 aa20.35■□□□□ 0.85
CLDND1-204ENST00000394185 BMP3P12645 472 aa20.35■□□□□ 0.85
CLDND1-204ENST00000394185 TNNI2P48788 182 aa20.35■□□□□ 0.85
CLDND1-204ENST00000394185 ZYXQ15942 572 aaKnown RBP20.35■□□□□ 0.85
CLDND1-204ENST00000394185 HS1BP3Q53T59 392 aa20.35■□□□□ 0.85
CLDND1-204ENST00000394185 DTHD1Q6ZMT9 781 aa20.35■□□□□ 0.85
CLDND1-204ENST00000394185 PLA2G4DQ86XP0 818 aa20.35■□□□□ 0.85
CLDND1-204ENST00000394185 POTEDQ86YR6 584 aa20.35■□□□□ 0.85
CLDND1-204ENST00000394185 CCDC39Q9UFE4 941 aa20.35■□□□□ 0.85
CLDND1-204ENST00000394185 CNOT7Q9UIV1 285 aaKnown RBP20.35■□□□□ 0.85
CLDND1-204ENST00000394185 PCDHA1Q9Y5I3 950 aa20.35■□□□□ 0.85
CLDND1-204ENST00000394185 USP17L15C9J2P7 530 aa20.34■□□□□ 0.85
CLDND1-204ENST00000394185 USP17L13C9JLJ4 530 aa20.34■□□□□ 0.85
CLDND1-204ENST00000394185 USP17L11C9JVI0 530 aa20.34■□□□□ 0.85
CLDND1-204ENST00000394185 USP17L18D6R9N7 530 aa20.34■□□□□ 0.85
CLDND1-204ENST00000394185 USP17L22D6RA61 530 aa20.34■□□□□ 0.85
CLDND1-204ENST00000394185 USP17L17D6RBQ6 530 aa20.34■□□□□ 0.85
CLDND1-204ENST00000394185 USP17L19D6RCP7 530 aa20.34■□□□□ 0.85
CLDND1-204ENST00000394185 USP17L20D6RJB6 530 aa20.34■□□□□ 0.85
CLDND1-204ENST00000394185 LONP1P36776 959 aaKnown RBP20.34■□□□□ 0.85
CLDND1-204ENST00000394185 SARSP49591 514 aaKnown RBP20.34■□□□□ 0.85
CLDND1-204ENST00000394185 CLK2P49760 499 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms