RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 FAM83BQ5T0W9 1011 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 JAKMIP3Q5VZ66 844 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 SHC4Q6S5L8 630 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 SAMD1Q6SPF0 538 aaPredicted RBP9.87□□□□□ -0.83
TDP1-203ENST00000393454 KRT25Q7Z3Z0 450 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 REXO1Q8N1G1 1221 aaKnown RBP9.87□□□□□ -0.83
TDP1-203ENST00000393454 ENGASEQ8NFI3 743 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 HOOK2Q96ED9 719 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 SDF4Q9BRK5 362 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 RBSNQ9H1K0 784 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 FBXO2Q9UK22 296 aaPredicted RBP9.87□□□□□ -0.83
TDP1-203ENST00000393454 MRVI1Q9Y6F6 885 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 UTRNP46939 3433 aa9.87□□□□□ -0.83
TDP1-203ENST00000393454 ESYT2A0FGR8 921 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 M0R2N6 131 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 PPP1R11O60927 126 aaPredicted RBP9.86□□□□□ -0.83
TDP1-203ENST00000393454 PTPREP23469 700 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 PTGDRQ13258 359 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 KIAA1755Q5JYT7 1200 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 RESP18Q5W5W9 173 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 DPY19L2Q6NUT2 758 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 PPP1R18Q6NYC8 613 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 FMR1NBQ8N0W7 255 aaPredicted RBP9.86□□□□□ -0.83
TDP1-203ENST00000393454 RNF214Q8ND24 703 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 MTMR8Q96EF0 704 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 ZNF341Q9BYN7 854 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 GLIS2Q9BZE0 524 aaPredicted RBP9.86□□□□□ -0.83
TDP1-203ENST00000393454 TMEM260Q9NX78 707 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 FAM13BQ9NYF5 915 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 PCDHA1Q9Y5I3 950 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 SRPRBQ9Y5M8 271 aaKnown RBP9.86□□□□□ -0.83
TDP1-203ENST00000393454 CTAGE5O15320 804 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 CTNND1O60716 968 aaKnown RBP9.86□□□□□ -0.83
TDP1-203ENST00000393454 ZNF202O95125 648 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 CCDC192P0DO97 292 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 SYKP43405 635 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 STAT2P52630 851 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 GRIN1Q05586 938 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 NONOQ15233 471 aaKnown RBP eCLIP9.86□□□□□ -0.83
TDP1-203ENST00000393454 SASS6Q6UVJ0 657 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 CUL5Q93034 780 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 VCPKMTQ9H867 229 aa9.86□□□□□ -0.83
TDP1-203ENST00000393454 ADARB2Q9NS39 739 aaKnown RBP9.86□□□□□ -0.83
TDP1-203ENST00000393454 POLR2AP24928 1970 aaKnown RBP9.85□□□□□ -0.83
TDP1-203ENST00000393454 INPP5BP32019 993 aa9.85□□□□□ -0.83
TDP1-203ENST00000393454 MRPL12P52815 198 aaKnown RBP9.85□□□□□ -0.83
TDP1-203ENST00000393454 USH1GQ495M9 461 aa9.85□□□□□ -0.83
TDP1-203ENST00000393454 FBXO11Q86XK2 927 aa9.85□□□□□ -0.83
TDP1-203ENST00000393454 KIFC2Q96AC6 838 aa9.85□□□□□ -0.83
TDP1-203ENST00000393454 CSRNP2Q9H175 543 aa9.85□□□□□ -0.83
TDP1-203ENST00000393454 PSTPIP2Q9H939 334 aa9.85□□□□□ -0.83
TDP1-203ENST00000393454 RIC8AQ9NPQ8 531 aa9.85□□□□□ -0.83
TDP1-203ENST00000393454 PRR12Q9ULL5 1215 aa9.85□□□□□ -0.83
TDP1-203ENST00000393454 FZD1Q9UP38 647 aa9.85□□□□□ -0.83
TDP1-203ENST00000393454 VWA3AA6NCI4 1184 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 ATP2C1P98194 919 aaPredicted RBP9.84□□□□□ -0.83
TDP1-203ENST00000393454 PRKG1Q13976 671 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 UBE2SQ16763 222 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 LETM2Q2VYF4 491 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 BTNL9Q6UXG8 535 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 ZNF579Q8NAF0 562 aaKnown RBP9.84□□□□□ -0.83
TDP1-203ENST00000393454 CHURC1Q8WUH1 139 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 FERMT2Q96AC1 680 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 DCPSQ96C86 337 aaKnown RBP9.84□□□□□ -0.83
TDP1-203ENST00000393454 WRNIP1Q96S55 665 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 AMNQ9BXJ7 453 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 PANK2Q9BZ23 570 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 PICK1Q9NRD5 415 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 GINM1Q9NU53 330 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.84□□□□□ -0.83
TDP1-203ENST00000393454 KCNH3Q9ULD8 1083 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 PPP2R3BQ9Y5P8 575 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 CCNT1O60563 726 aaKnown RBP9.84□□□□□ -0.83
TDP1-203ENST00000393454 TYRO3Q06418 890 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 SUPT20HL1Q3ZLR7 823 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 NEK8Q86SG6 692 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 TBCKQ8TEA7 893 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 ZKSCAN4Q969J2 545 aaPredicted RBP9.84□□□□□ -0.83
TDP1-203ENST00000393454 HPSEQ9Y251 543 aa9.84□□□□□ -0.83
TDP1-203ENST00000393454 CCDC174Q6PII3 467 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 RBM43Q6ZSC3 357 aaKnown RBP9.83□□□□□ -0.84
TDP1-203ENST00000393454 SULF1Q8IWU6 871 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 SCYL3Q8IZE3 742 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 ANP32BQ92688 251 aaKnown RBP9.83□□□□□ -0.84
TDP1-203ENST00000393454 ERCC4Q92889 916 aaPredicted RBP9.83□□□□□ -0.84
TDP1-203ENST00000393454 FUCA2Q9BTY2 467 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 GLT8D2Q9H1C3 349 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 FEM1BQ9UK73 627 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 MORC2Q9Y6X9 1032 aaPredicted RBP9.83□□□□□ -0.84
TDP1-203ENST00000393454 FAM237AA0A1B0GTK4 181 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 USP17L15C9J2P7 530 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 USP17L13C9JLJ4 530 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 USP17L11C9JVI0 530 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 USP17L18D6R9N7 530 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 USP17L22D6RA61 530 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 USP17L17D6RBQ6 530 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 USP17L19D6RCP7 530 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 USP17L20D6RJB6 530 aa9.83□□□□□ -0.84
TDP1-203ENST00000393454 POLR2DO15514 142 aaKnown RBP9.83□□□□□ -0.84
TDP1-203ENST00000393454 USP17L24Q0WX57 530 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms