RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 TEX11Q8IYF3 940 aa13.87□□□□□ -0.19
RFC5-201ENST00000392542 RASSF8Q8NHQ8 419 aa13.87□□□□□ -0.19
RFC5-201ENST00000392542 NEDD1Q8NHV4 660 aa13.87□□□□□ -0.19
RFC5-201ENST00000392542 CCDC12Q8WUD4 166 aaPredicted RBP13.87□□□□□ -0.19
RFC5-201ENST00000392542 ZMYND12Q9H0C1 365 aa13.87□□□□□ -0.19
RFC5-201ENST00000392542 KLRC4O43908 158 aa13.86□□□□□ -0.19
RFC5-201ENST00000392542 UFL1O94874 794 aa13.86□□□□□ -0.19
RFC5-201ENST00000392542 IL1R1P14778 569 aa13.86□□□□□ -0.19
RFC5-201ENST00000392542 SEMA3FQ13275 785 aa13.86□□□□□ -0.19
RFC5-201ENST00000392542 KRT25Q7Z3Z0 450 aa13.86□□□□□ -0.19
RFC5-201ENST00000392542 TMTC1Q8IUR5 882 aa13.86□□□□□ -0.19
RFC5-201ENST00000392542 CERKQ8TCT0 537 aa13.86□□□□□ -0.19
RFC5-201ENST00000392542 PARP1P09874 1014 aaKnown RBP13.86□□□□□ -0.19
RFC5-201ENST00000392542 PLCG2P16885 1265 aa13.86□□□□□ -0.19
RFC5-201ENST00000392542 NAPAP54920 295 aa13.86□□□□□ -0.19
RFC5-201ENST00000392542 LZTFL1Q9NQ48 299 aa13.86□□□□□ -0.19
RFC5-201ENST00000392542 ABHD10Q9NUJ1 306 aa13.86□□□□□ -0.19
RFC5-201ENST00000392542 KBTBD4Q9NVX7 518 aa13.86□□□□□ -0.19
RFC5-201ENST00000392542 USP21Q9UK80 565 aa13.86□□□□□ -0.19
RFC5-201ENST00000392542 MAPK8IP1Q9UQF2 711 aa13.86□□□□□ -0.19
RFC5-201ENST00000392542 FLT1P17948 1338 aa13.86□□□□□ -0.19
RFC5-201ENST00000392542 IRX2Q9BZI1 471 aaPredicted RBP13.85□□□□□ -0.19
RFC5-201ENST00000392542 CUEDC2Q9H467 287 aa13.85□□□□□ -0.19
RFC5-201ENST00000392542 MAGEF1Q9HAY2 307 aa13.85□□□□□ -0.19
RFC5-201ENST00000392542 GGA1Q9UJY5 639 aa13.85□□□□□ -0.19
RFC5-201ENST00000392542 KIF5CO60282 957 aa13.85□□□□□ -0.19
RFC5-201ENST00000392542 RHOBTB3O94955 611 aa13.85□□□□□ -0.19
RFC5-201ENST00000392542 OR52Z1P0C646 297 aa13.85□□□□□ -0.19
RFC5-201ENST00000392542 ADRA2BP18089 450 aa13.85□□□□□ -0.19
RFC5-201ENST00000392542 ERVK-24P63145 666 aa13.85□□□□□ -0.19
RFC5-201ENST00000392542 STIM1Q13586 685 aa13.85□□□□□ -0.19
RFC5-201ENST00000392542 CRY2Q49AN0 593 aa13.85□□□□□ -0.19
RFC5-201ENST00000392542 RSRC2Q7L4I2 434 aaKnown RBP13.85□□□□□ -0.19
RFC5-201ENST00000392542 IRF2BP1Q8IU81 584 aa13.85□□□□□ -0.19
RFC5-201ENST00000392542 AK8Q96MA6 479 aa13.85□□□□□ -0.19
RFC5-201ENST00000392542 CPVLQ9H3G5 476 aa13.85□□□□□ -0.19
RFC5-201ENST00000392542 C6orf50Q9HD87 102 aa13.85□□□□□ -0.19
RFC5-201ENST00000392542 TTF2Q9UNY4 1162 aaKnown RBP13.85□□□□□ -0.19
RFC5-201ENST00000392542 A0A0U1RQJ8 604 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 TRIM49BA6NDI0 452 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 ZRANB2O95218 330 aaKnown RBP eCLIP13.84□□□□□ -0.19
RFC5-201ENST00000392542 SMARCA1P28370 1054 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 RHBDL3P58872 404 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 NONOQ15233 471 aaKnown RBP eCLIP13.84□□□□□ -0.19
RFC5-201ENST00000392542 TMCO3Q6UWJ1 677 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 CYP26C1Q6V0L0 522 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 CABP7Q86V35 215 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 GPR161Q8N6U8 529 aaKnown RBP13.84□□□□□ -0.19
RFC5-201ENST00000392542 GIMAP8Q8ND71 665 aaPredicted RBP13.84□□□□□ -0.19
RFC5-201ENST00000392542 ATRIPQ8WXE1 791 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 RRP36Q96EU6 259 aaKnown RBP13.84□□□□□ -0.19
RFC5-201ENST00000392542 FAM163AQ96GL9 167 aaPredicted RBP13.84□□□□□ -0.19
RFC5-201ENST00000392542 NUP88Q99567 741 aaPredicted RBP13.84□□□□□ -0.19
RFC5-201ENST00000392542 FHOD1Q9Y613 1164 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 FOCADQ5VW36 1801 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 SMCO2A6NFE2 343 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 RNF225M0QZC1 329 aaPredicted RBP13.84□□□□□ -0.19
RFC5-201ENST00000392542 EEF1GP26641 437 aaKnown RBP13.84□□□□□ -0.19
RFC5-201ENST00000392542 GNA11P29992 359 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 UBXN1Q04323 297 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 CREBRFQ8IUR6 639 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 SLF2Q8IX21 1173 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 LRRC15Q8TF66 581 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 RBM17Q96I25 401 aaKnown RBP13.84□□□□□ -0.19
RFC5-201ENST00000392542 PLIN2Q99541 437 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 THAP9Q9H5L6 903 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 GAKO14976 1311 aa13.84□□□□□ -0.19
RFC5-201ENST00000392542 PSMA7O14818 248 aa13.83□□□□□ -0.19
RFC5-201ENST00000392542 NOVP48745 357 aa13.83□□□□□ -0.19
RFC5-201ENST00000392542 PMS1P54277 932 aaKnown RBP13.83□□□□□ -0.19
RFC5-201ENST00000392542 ST5P78524 1137 aa13.83□□□□□ -0.19
RFC5-201ENST00000392542 TEX35Q5T0J7 233 aa13.83□□□□□ -0.19
RFC5-201ENST00000392542 USP17L2Q6R6M4 530 aa13.83□□□□□ -0.19
RFC5-201ENST00000392542 ACRBPQ8NEB7 543 aa13.83□□□□□ -0.19
RFC5-201ENST00000392542 UBR3Q6ZT12 1888 aa13.83□□□□□ -0.2
RFC5-201ENST00000392542 LGALS16A8MUM7 142 aa13.83□□□□□ -0.2
RFC5-201ENST00000392542 CCNT1O60563 726 aaKnown RBP13.83□□□□□ -0.2
RFC5-201ENST00000392542 PNMA6AP0CW24 399 aaPredicted RBP13.83□□□□□ -0.2
RFC5-201ENST00000392542 PLCG1P19174 1290 aa13.83□□□□□ -0.2
RFC5-201ENST00000392542 KRT9P35527 623 aa13.83□□□□□ -0.2
RFC5-201ENST00000392542 ORC2Q13416 577 aaPredicted RBP13.83□□□□□ -0.2
RFC5-201ENST00000392542 LETM2Q2VYF4 491 aa13.83□□□□□ -0.2
RFC5-201ENST00000392542 MFSD14BQ5SR56 506 aa13.83□□□□□ -0.2
RFC5-201ENST00000392542 SOGA3Q5TF21 947 aa13.83□□□□□ -0.2
RFC5-201ENST00000392542 NEK8Q86SG6 692 aa13.83□□□□□ -0.2
RFC5-201ENST00000392542 NOC3LQ8WTT2 800 aaKnown RBP13.83□□□□□ -0.2
RFC5-201ENST00000392542 RABGGTAQ92696 567 aa13.83□□□□□ -0.2
RFC5-201ENST00000392542 GOLGA1Q92805 767 aa13.83□□□□□ -0.2
RFC5-201ENST00000392542 CEP95Q96GE4 821 aa13.83□□□□□ -0.2
RFC5-201ENST00000392542 TRIM47Q96LD4 638 aa13.83□□□□□ -0.2
RFC5-201ENST00000392542 SEC63Q9UGP8 760 aaKnown RBP13.83□□□□□ -0.2
RFC5-201ENST00000392542 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.82□□□□□ -0.2
RFC5-201ENST00000392542 A0A1W2PQC6 194 aa13.82□□□□□ -0.2
RFC5-201ENST00000392542 TXNRD1Q16881 649 aa13.82□□□□□ -0.2
RFC5-201ENST00000392542 ZNF569Q5MCW4 686 aa13.82□□□□□ -0.2
RFC5-201ENST00000392542 MB21D1Q8N884 522 aa13.82□□□□□ -0.2
RFC5-201ENST00000392542 TBC1D22AQ8WUA7 517 aa13.82□□□□□ -0.2
RFC5-201ENST00000392542 CCDC47Q96A33 483 aaKnown RBP13.82□□□□□ -0.2
RFC5-201ENST00000392542 DHTKD1Q96HY7 919 aaPredicted RBP13.82□□□□□ -0.2
RFC5-201ENST00000392542 PIGSQ96S52 555 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 258.3 ms