RNA–Protein interactions for RNA: ENST00000380051.6

RPP40-202, Transcript of ribonuclease P/MRP subunit p40, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RPP40, Length 1,483 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-202ENST00000380051 CDC37Q16543 378 aaPredicted RBP17.39■□□□□ 0.37
RPP40-202ENST00000380051 DEFB115Q30KQ5 88 aa17.39■□□□□ 0.37
RPP40-202ENST00000380051 ANKRD23Q86SG2 305 aa17.39■□□□□ 0.37
RPP40-202ENST00000380051 FAM177A1Q8N128 213 aaPredicted RBP17.39■□□□□ 0.37
RPP40-202ENST00000380051 PIBF1Q8WXW3 757 aa17.39■□□□□ 0.37
RPP40-202ENST00000380051 SH3GLB2Q9NR46 395 aa17.39■□□□□ 0.37
RPP40-202ENST00000380051 PNMA2Q9UL42 364 aa17.39■□□□□ 0.37
RPP40-202ENST00000380051 ADAMTS5Q9UNA0 930 aa17.39■□□□□ 0.37
RPP40-202ENST00000380051 RASSF10A6NK89 507 aa17.38■□□□□ 0.37
RPP40-202ENST00000380051 ZBED4O75132 1171 aa17.38■□□□□ 0.37
RPP40-202ENST00000380051 DDIT3P35638 169 aa17.38■□□□□ 0.37
RPP40-202ENST00000380051 IRX3P78415 501 aaPredicted RBP17.38■□□□□ 0.37
RPP40-202ENST00000380051 QRICH1Q2TAL8 776 aa17.38■□□□□ 0.37
RPP40-202ENST00000380051 BRI3BPQ8WY22 251 aa17.38■□□□□ 0.37
RPP40-202ENST00000380051 C8orf76Q96K31 380 aa17.38■□□□□ 0.37
RPP40-202ENST00000380051 PNMA3Q9UL41 463 aa17.38■□□□□ 0.37
RPP40-202ENST00000380051 CIZ1Q9ULV3 898 aaPredicted RBP17.38■□□□□ 0.37
RPP40-202ENST00000380051 SYT1P21579 422 aa17.37■□□□□ 0.37
RPP40-202ENST00000380051 TRIM29Q14134 588 aa17.37■□□□□ 0.37
RPP40-202ENST00000380051 AMNQ9BXJ7 453 aa17.37■□□□□ 0.37
RPP40-202ENST00000380051 SLC38A10Q9HBR0 1119 aa17.37■□□□□ 0.37
RPP40-202ENST00000380051 BARHL2Q9NY43 387 aa17.37■□□□□ 0.37
RPP40-202ENST00000380051 CTDP1Q9Y5B0 961 aaPredicted RBP17.37■□□□□ 0.37
RPP40-202ENST00000380051 PARP14Q460N5 1801 aa17.37■□□□□ 0.37
RPP40-202ENST00000380051 BTBD19C9JJ37 291 aa17.37■□□□□ 0.37
RPP40-202ENST00000380051 VWA5AO00534 786 aa17.37■□□□□ 0.37
RPP40-202ENST00000380051 LBX2Q6XYB7 198 aa17.37■□□□□ 0.37
RPP40-202ENST00000380051 FBXO11Q86XK2 927 aa17.37■□□□□ 0.37
RPP40-202ENST00000380051 FBXO18Q8NFZ0 1043 aa17.37■□□□□ 0.37
RPP40-202ENST00000380051 CCDC12Q8WUD4 166 aaPredicted RBP17.37■□□□□ 0.37
RPP40-202ENST00000380051 ATG4CQ96DT6 458 aa17.37■□□□□ 0.37
RPP40-202ENST00000380051 AIFM3Q96NN9 605 aa17.37■□□□□ 0.37
RPP40-202ENST00000380051 P2RX7Q99572 595 aaKnown RBP17.37■□□□□ 0.37
RPP40-202ENST00000380051 ASCC2Q9H1I8 757 aaPredicted RBP17.37■□□□□ 0.37
RPP40-202ENST00000380051 ZCCHC17Q9NP64 241 aaKnown RBP17.37■□□□□ 0.37
RPP40-202ENST00000380051 RLFQ13129 1914 aa17.36■□□□□ 0.37
RPP40-202ENST00000380051 SPDYE16A6NNV3 312 aaPredicted RBP17.36■□□□□ 0.37
RPP40-202ENST00000380051 H3BQV1 296 aa17.36■□□□□ 0.37
RPP40-202ENST00000380051 STX6O43752 255 aa17.36■□□□□ 0.37
RPP40-202ENST00000380051 OAZ1P54368 228 aa17.36■□□□□ 0.37
RPP40-202ENST00000380051 NUCB2P80303 420 aa17.36■□□□□ 0.37
RPP40-202ENST00000380051 SREBF2Q12772 1141 aa17.36■□□□□ 0.37
RPP40-202ENST00000380051 IFFO2Q5TF58 517 aa17.36■□□□□ 0.37
RPP40-202ENST00000380051 WWC2Q6AWC2 1192 aa17.36■□□□□ 0.37
RPP40-202ENST00000380051 PAXIP1Q6ZW49 1069 aaPredicted RBP17.36■□□□□ 0.37
RPP40-202ENST00000380051 HEATR3Q7Z4Q2 680 aa17.36■□□□□ 0.37
RPP40-202ENST00000380051 MB21D1Q8N884 522 aa17.36■□□□□ 0.37
RPP40-202ENST00000380051 CCDC148Q8NFR7 591 aa17.36■□□□□ 0.37
RPP40-202ENST00000380051 SP7Q8TDD2 431 aaPredicted RBP17.36■□□□□ 0.37
RPP40-202ENST00000380051 GTF3C2Q8WUA4 911 aaPredicted RBP17.36■□□□□ 0.37
RPP40-202ENST00000380051 PDHXO00330 501 aa17.35■□□□□ 0.37
RPP40-202ENST00000380051 ICAM1P05362 532 aa17.35■□□□□ 0.37
RPP40-202ENST00000380051 SNAP25P60880 206 aa17.35■□□□□ 0.37
RPP40-202ENST00000380051 NOGQ13253 232 aa17.35■□□□□ 0.37
RPP40-202ENST00000380051 KRT40Q6A162 431 aa17.35■□□□□ 0.37
RPP40-202ENST00000380051 OTUD7BQ6GQQ9 843 aa17.35■□□□□ 0.37
RPP40-202ENST00000380051 CYP4F22Q6NT55 531 aa17.35■□□□□ 0.37
RPP40-202ENST00000380051 PPP1R18Q6NYC8 613 aa17.35■□□□□ 0.37
RPP40-202ENST00000380051 GPKOWQ92917 476 aaPredicted RBP eCLIP17.35■□□□□ 0.37
RPP40-202ENST00000380051 PTPN18Q99952 460 aa17.35■□□□□ 0.37
RPP40-202ENST00000380051 CHMP5Q9NZZ3 219 aa17.35■□□□□ 0.37
RPP40-202ENST00000380051 VPS54Q9P1Q0 977 aa17.35■□□□□ 0.37
RPP40-202ENST00000380051 PCDHA1Q9Y5I3 950 aa17.35■□□□□ 0.37
RPP40-202ENST00000380051 STXBP3O00186 592 aa17.34■□□□□ 0.37
RPP40-202ENST00000380051 ATP2A1O14983 1001 aa17.34■□□□□ 0.37
RPP40-202ENST00000380051 PPP1R11O60927 126 aaPredicted RBP17.34■□□□□ 0.37
RPP40-202ENST00000380051 TM4SF4P48230 202 aa17.34■□□□□ 0.37
RPP40-202ENST00000380051 NAPAP54920 295 aa17.34■□□□□ 0.37
RPP40-202ENST00000380051 HERVK_113P62684 666 aa17.34■□□□□ 0.37
RPP40-202ENST00000380051 GALNT17Q6IS24 598 aa17.34■□□□□ 0.37
RPP40-202ENST00000380051 CCDC174Q6PII3 467 aa17.34■□□□□ 0.37
RPP40-202ENST00000380051 FAM43AQ8N2R8 423 aa17.34■□□□□ 0.37
RPP40-202ENST00000380051 REPS2Q8NFH8 660 aa17.34■□□□□ 0.37
RPP40-202ENST00000380051 COA7Q96BR5 231 aa17.34■□□□□ 0.37
RPP40-202ENST00000380051 ZNF536O15090 1300 aa17.33■□□□□ 0.37
RPP40-202ENST00000380051 WDR33Q9C0J8 1336 aaKnown RBP17.33■□□□□ 0.37
RPP40-202ENST00000380051 ESYT2A0FGR8 921 aa17.33■□□□□ 0.37
RPP40-202ENST00000380051 CALML3P27482 149 aa17.33■□□□□ 0.37
RPP40-202ENST00000380051 NLRP5P59047 1200 aa17.33■□□□□ 0.37
RPP40-202ENST00000380051 CAPNS2Q96L46 248 aa17.33■□□□□ 0.37
RPP40-202ENST00000380051 PHF20Q9BVI0 1012 aa17.33■□□□□ 0.37
RPP40-202ENST00000380051 MTMR6Q9Y217 621 aa17.33■□□□□ 0.37
RPP40-202ENST00000380051 ABCB11O95342 1321 aa17.33■□□□□ 0.36
RPP40-202ENST00000380051 MMP1P03956 469 aa17.32■□□□□ 0.36
RPP40-202ENST00000380051 GNA11P29992 359 aa17.32■□□□□ 0.36
RPP40-202ENST00000380051 FOSBP53539 338 aa17.32■□□□□ 0.36
RPP40-202ENST00000380051 KIF23Q02241 960 aaPredicted RBP17.32■□□□□ 0.36
RPP40-202ENST00000380051 SAFBQ15424 915 aaKnown RBP eCLIP17.32■□□□□ 0.36
RPP40-202ENST00000380051 TEX2Q8IWB9 1127 aa17.32■□□□□ 0.36
RPP40-202ENST00000380051 CPXCR1Q8N123 301 aa17.32■□□□□ 0.36
RPP40-202ENST00000380051 PARK7Q99497 189 aaKnown RBP17.32■□□□□ 0.36
RPP40-202ENST00000380051 ZMYND12Q9H0C1 365 aa17.32■□□□□ 0.36
RPP40-202ENST00000380051 GLT8D2Q9H1C3 349 aa17.32■□□□□ 0.36
RPP40-202ENST00000380051 RAVER2Q9HCJ3 691 aaKnown RBP17.32■□□□□ 0.36
RPP40-202ENST00000380051 C6orf50Q9HD87 102 aa17.32■□□□□ 0.36
RPP40-202ENST00000380051 GJB4Q9NTQ9 266 aa17.32■□□□□ 0.36
RPP40-202ENST00000380051 CCPG1Q9ULG6 757 aa17.32■□□□□ 0.36
RPP40-202ENST00000380051 MRPL11Q9Y3B7 192 aaKnown RBP17.32■□□□□ 0.36
RPP40-202ENST00000380051 VPS37CA5D8V6 355 aaPredicted RBP17.31■□□□□ 0.36
RPP40-202ENST00000380051 SMCO2A6NFE2 343 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms