RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 RNF10Q8N5U6 811 aaKnown RBP17.9■□□□□ 0.46
RGP1-201ENST00000378078 PLBD2Q8NHP8 589 aa17.9■□□□□ 0.46
RGP1-201ENST00000378078 HVCN1Q96D96 273 aa17.9■□□□□ 0.46
RGP1-201ENST00000378078 SH3TC1Q8TE82 1336 aa17.9■□□□□ 0.46
RGP1-201ENST00000378078 FGD4Q96M96 766 aa17.9■□□□□ 0.46
RGP1-201ENST00000378078 AP5M1Q9H0R1 490 aa17.9■□□□□ 0.46
RGP1-201ENST00000378078 TYW5A2RUC4 315 aaKnown RBP17.9■□□□□ 0.46
RGP1-201ENST00000378078 PDE6BP35913 854 aa17.9■□□□□ 0.46
RGP1-201ENST00000378078 HNRNPCL2B2RXH8 293 aa17.9■□□□□ 0.46
RGP1-201ENST00000378078 HNRNPCL1O60812 293 aaKnown RBP17.9■□□□□ 0.46
RGP1-201ENST00000378078 CEP128Q6ZU80 1094 aa17.9■□□□□ 0.46
RGP1-201ENST00000378078 CDC37L1Q7L3B6 337 aa17.9■□□□□ 0.46
RGP1-201ENST00000378078 ORAI2Q96SN7 254 aa17.9■□□□□ 0.46
RGP1-201ENST00000378078 AMFRQ9UKV5 643 aa17.9■□□□□ 0.46
RGP1-201ENST00000378078 ZBBXA8MT70 800 aa17.89■□□□□ 0.46
RGP1-201ENST00000378078 PHEXP78562 749 aa17.89■□□□□ 0.46
RGP1-201ENST00000378078 SMAD1Q15797 465 aaKnown RBP17.89■□□□□ 0.46
RGP1-201ENST00000378078 ARMCX5Q6P1M9 558 aa17.89■□□□□ 0.46
RGP1-201ENST00000378078 GDF11O95390 407 aa17.89■□□□□ 0.45
RGP1-201ENST00000378078 LRGUKQ96M69 825 aa17.89■□□□□ 0.45
RGP1-201ENST00000378078 TPX2Q9ULW0 747 aaKnown RBP17.89■□□□□ 0.45
RGP1-201ENST00000378078 NCOA1Q15788 1441 aa17.89■□□□□ 0.45
RGP1-201ENST00000378078 ATP6V1E1P36543 226 aa17.89■□□□□ 0.45
RGP1-201ENST00000378078 KIF11P52732 1056 aa17.89■□□□□ 0.45
RGP1-201ENST00000378078 NSUN2Q08J23 767 aaKnown RBP eCLIP17.89■□□□□ 0.45
RGP1-201ENST00000378078 DNAJC10Q8IXB1 793 aa17.89■□□□□ 0.45
RGP1-201ENST00000378078 DBNDD1Q9H9R9 158 aa17.89■□□□□ 0.45
RGP1-201ENST00000378078 GSTA4O15217 222 aa17.89■□□□□ 0.45
RGP1-201ENST00000378078 ZNF277Q9NRM2 450 aaPredicted RBP17.89■□□□□ 0.45
RGP1-201ENST00000378078 BAIAP2L1Q9UHR4 511 aa17.89■□□□□ 0.45
RGP1-201ENST00000378078 DHX29Q7Z478 1369 aaKnown RBP17.89■□□□□ 0.45
RGP1-201ENST00000378078 REXO1Q8N1G1 1221 aaKnown RBP17.89■□□□□ 0.45
RGP1-201ENST00000378078 FAM8A1Q9UBU6 413 aa17.89■□□□□ 0.45
RGP1-201ENST00000378078 ANKRD36BQ8N2N9 1353 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 KRIT1O00522 736 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 GADD45BO75293 160 aaPredicted RBP17.88■□□□□ 0.45
RGP1-201ENST00000378078 PPARAQ07869 468 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 PLEKHM2Q8IWE5 1019 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 METTL22Q9BUU2 404 aaPredicted RBP17.88■□□□□ 0.45
RGP1-201ENST00000378078 EYA2O00167 538 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 IFIH1Q9BYX4 1025 aaKnown RBP17.88■□□□□ 0.45
RGP1-201ENST00000378078 RIMS2Q9UQ26 1411 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 TMEM232C9JQI7 657 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 POLR2FP61218 127 aaKnown RBP17.88■□□□□ 0.45
RGP1-201ENST00000378078 KRT71Q3SY84 523 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 HESX1Q9UBX0 185 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 SUGT1Q9Y2Z0 365 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 DENND4BO75064 1496 aaPredicted RBP17.88■□□□□ 0.45
RGP1-201ENST00000378078 ZNF18P17022 549 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 KRT25Q7Z3Z0 450 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 SNX25Q9H3E2 840 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 C1orf112Q9NSG2 853 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 YTHDC2Q9H6S0 1430 aaKnown RBP17.88■□□□□ 0.45
RGP1-201ENST00000378078 SOX5P35711 763 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 NOP14P78316 857 aaKnown RBP17.88■□□□□ 0.45
RGP1-201ENST00000378078 HADHQ16836 314 aaKnown RBP17.88■□□□□ 0.45
RGP1-201ENST00000378078 DESI2Q9BSY9 194 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 MEIS1O00470 390 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 BTDP43251 543 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 DBN1Q16643 649 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 C14orf93Q9H972 538 aaKnown RBP17.88■□□□□ 0.45
RGP1-201ENST00000378078 SLC38A10Q9HBR0 1119 aa17.88■□□□□ 0.45
RGP1-201ENST00000378078 ACTN1P12814 892 aa17.87■□□□□ 0.45
RGP1-201ENST00000378078 SLC16A2P36021 539 aa17.87■□□□□ 0.45
RGP1-201ENST00000378078 CCDC93Q567U6 631 aa17.87■□□□□ 0.45
RGP1-201ENST00000378078 ARFGAP2Q8N6H7 521 aa17.87■□□□□ 0.45
RGP1-201ENST00000378078 HEXIM1O94992 359 aaKnown RBP17.87■□□□□ 0.45
RGP1-201ENST00000378078 YWHAGP61981 247 aaKnown RBP eCLIP17.87■□□□□ 0.45
RGP1-201ENST00000378078 PLA2G4DQ86XP0 818 aa17.87■□□□□ 0.45
RGP1-201ENST00000378078 GOLGA8SH3BPF8 625 aa17.87■□□□□ 0.45
RGP1-201ENST00000378078 RGS16O15492 202 aaPredicted RBP17.87■□□□□ 0.45
RGP1-201ENST00000378078 SEC24BO95487 1268 aa17.87■□□□□ 0.45
RGP1-201ENST00000378078 RINT1Q6NUQ1 792 aa17.87■□□□□ 0.45
RGP1-201ENST00000378078 DDX41Q9UJV9 622 aaKnown RBP17.87■□□□□ 0.45
RGP1-201ENST00000378078 INPP5BP32019 993 aa17.87■□□□□ 0.45
RGP1-201ENST00000378078 BLVRAP53004 296 aa17.87■□□□□ 0.45
RGP1-201ENST00000378078 YWHAEP62258 255 aaKnown RBP17.87■□□□□ 0.45
RGP1-201ENST00000378078 SYCE1Q8N0S2 351 aa17.87■□□□□ 0.45
RGP1-201ENST00000378078 N4BP2L2Q92802 583 aaPredicted RBP17.87■□□□□ 0.45
RGP1-201ENST00000378078 CBX8Q9HC52 389 aa17.87■□□□□ 0.45
RGP1-201ENST00000378078 SNX14Q9Y5W7 946 aa17.87■□□□□ 0.45
RGP1-201ENST00000378078 ZSCAN20P17040 1043 aaPredicted RBP17.87■□□□□ 0.45
RGP1-201ENST00000378078 FAM149B1Q96BN6 582 aa17.87■□□□□ 0.45
RGP1-201ENST00000378078 SLC7A5P2Q9GIP4 190 aa17.87■□□□□ 0.45
RGP1-201ENST00000378078 CPSF3Q9UKF6 684 aaKnown RBP17.87■□□□□ 0.45
RGP1-201ENST00000378078 XRCC5P13010 732 aaKnown RBP17.86■□□□□ 0.45
RGP1-201ENST00000378078 METTL23Q86XA0 190 aa17.86■□□□□ 0.45
RGP1-201ENST00000378078 USP17L12C9JPN9 530 aa17.86■□□□□ 0.45
RGP1-201ENST00000378078 USP17L21D6R901 530 aa17.86■□□□□ 0.45
RGP1-201ENST00000378078 RLBP1P12271 317 aa17.86■□□□□ 0.45
RGP1-201ENST00000378078 NLRP12P59046 1061 aa17.86■□□□□ 0.45
RGP1-201ENST00000378078 IPO11Q9UI26 975 aaKnown RBP17.86■□□□□ 0.45
RGP1-201ENST00000378078 RAD17O75943 681 aa17.86■□□□□ 0.45
RGP1-201ENST00000378078 TMEM87BQ96K49 555 aa17.86■□□□□ 0.45
RGP1-201ENST00000378078 TEKT3Q9BXF9 490 aa17.86■□□□□ 0.45
RGP1-201ENST00000378078 INO80B-WBP1J3KQ70 363 aa17.86■□□□□ 0.45
RGP1-201ENST00000378078 NPR1P16066 1061 aa17.86■□□□□ 0.45
RGP1-201ENST00000378078 CTNNA1P35221 906 aaKnown RBP17.86■□□□□ 0.45
RGP1-201ENST00000378078 INO80BQ9C086 356 aaPredicted RBP17.86■□□□□ 0.45
RGP1-201ENST00000378078 TSPYL2Q9H2G4 693 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms