RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 GLI1P08151 1106 aa17.46■□□□□ 0.39
CSNK1A1-202ENST00000377843 PARP1P09874 1014 aaKnown RBP17.46■□□□□ 0.39
CSNK1A1-202ENST00000377843 IL15P40933 162 aaPredicted RBP17.46■□□□□ 0.39
CSNK1A1-202ENST00000377843 BIRC2Q13490 618 aa17.46■□□□□ 0.39
CSNK1A1-202ENST00000377843 TMEM67Q5HYA8 995 aa17.46■□□□□ 0.39
CSNK1A1-202ENST00000377843 FNBP4Q8N3X1 1017 aaPredicted RBP17.46■□□□□ 0.39
CSNK1A1-202ENST00000377843 PPANQ9NQ55 473 aaKnown RBP17.46■□□□□ 0.39
CSNK1A1-202ENST00000377843 NLRP2Q9NX02 1062 aa17.46■□□□□ 0.39
CSNK1A1-202ENST00000377843 LRWD1Q9UFC0 647 aa17.46■□□□□ 0.39
CSNK1A1-202ENST00000377843 GDAQ9Y2T3 454 aa17.46■□□□□ 0.39
CSNK1A1-202ENST00000377843 TACC3Q9Y6A5 838 aa17.46■□□□□ 0.39
CSNK1A1-202ENST00000377843 RGPD2P0DJD1 1756 aa17.46■□□□□ 0.39
CSNK1A1-202ENST00000377843 PATL2C9JE40 543 aaKnown RBP17.46■□□□□ 0.39
CSNK1A1-202ENST00000377843 SPAG1Q07617 926 aa17.46■□□□□ 0.39
CSNK1A1-202ENST00000377843 RBM12Q9NTZ6 932 aaKnown RBP17.46■□□□□ 0.39
CSNK1A1-202ENST00000377843 GGA2Q9UJY4 613 aa17.46■□□□□ 0.39
CSNK1A1-202ENST00000377843 NFU1Q9UMS0 254 aa17.46■□□□□ 0.39
CSNK1A1-202ENST00000377843 IFNAR1P17181 557 aa17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 PMS1P54277 932 aaKnown RBP17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 ITIH3Q06033 890 aa17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 ITGB3BPQ13352 177 aaPredicted RBP17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 CFAP58Q5T655 872 aa17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 ZNF790Q6PG37 636 aa17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 CCDC121Q6ZUS5 278 aa17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 SGMS1Q86VZ5 419 aa17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 OSBPL9Q96SU4 736 aa17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 LGALS16A8MUM7 142 aa17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 EYA2O00167 538 aa17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 PES1O00541 588 aaKnown RBP17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 BACH1O14867 736 aa17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 NCK2O43639 380 aa17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 ERCC3P19447 782 aa17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 BYSLQ13895 437 aaKnown RBP17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 ANKRD20A8PQ5CZ79 823 aa17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 RUBCNQ92622 972 aa17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 ATP6V0A4Q9HBG4 840 aa17.45■□□□□ 0.38
CSNK1A1-202ENST00000377843 EME2A4GXA9 379 aaPredicted RBP17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 MOCS3O95396 460 aa17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 ZFYP08048 801 aaPredicted RBP17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 PLEKP08567 350 aaPredicted RBP17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 CSB-PGBD3P0DP91 1061 aa17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 TNFRSF8P28908 595 aa17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 GUCY2FP51841 1108 aa17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 GRIK3Q13003 919 aa17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 TRADDQ15628 312 aa17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 FMNL3Q8IVF7 1028 aa17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 MAGEC3Q8TD91 643 aa17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 TTYH3Q9C0H2 523 aa17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 C5P01031 1676 aa17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 PRCPP42785 496 aa17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 DRP2Q13474 957 aa17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 NAA25Q14CX7 972 aa17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 AMOTQ4VCS5 1084 aa17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 ATP6V1G3Q96LB4 118 aa17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 SLC12A7Q9Y666 1083 aa17.44■□□□□ 0.38
CSNK1A1-202ENST00000377843 EZRP15311 586 aaKnown RBP17.43■□□□□ 0.38
CSNK1A1-202ENST00000377843 HPDP32754 393 aaPredicted RBP17.43■□□□□ 0.38
CSNK1A1-202ENST00000377843 CYLC1P35663 651 aaPredicted RBP17.43■□□□□ 0.38
CSNK1A1-202ENST00000377843 MS4A14Q96JA4 679 aa17.43■□□□□ 0.38
CSNK1A1-202ENST00000377843 TMEM87BQ96K49 555 aa17.43■□□□□ 0.38
CSNK1A1-202ENST00000377843 ACTR5Q9H9F9 607 aaPredicted RBP17.43■□□□□ 0.38
CSNK1A1-202ENST00000377843 CEP131Q9UPN4 1083 aa17.43■□□□□ 0.38
CSNK1A1-202ENST00000377843 XIRP1Q702N8 1843 aaKnown RBP17.43■□□□□ 0.38
CSNK1A1-202ENST00000377843 VAV2P52735 878 aa17.43■□□□□ 0.38
CSNK1A1-202ENST00000377843 CTDSPL2Q05D32 466 aa17.43■□□□□ 0.38
CSNK1A1-202ENST00000377843 C8orf74Q6P047 294 aa17.43■□□□□ 0.38
CSNK1A1-202ENST00000377843 ZNF496Q96IT1 587 aaPredicted RBP17.43■□□□□ 0.38
CSNK1A1-202ENST00000377843 SPATA31A3Q5VYP0 1347 aa17.43■□□□□ 0.38
CSNK1A1-202ENST00000377843 TRPM3Q9HCF6 1732 aaPredicted RBP17.43■□□□□ 0.38
CSNK1A1-202ENST00000377843 KIF3CO14782 793 aa17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 ATP2C2O75185 946 aa17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 SCTRP47872 440 aa17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 KIF5AQ12840 1032 aa17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 TSR1Q2NL82 804 aaKnown RBP17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 ZSWIM5Q9P217 1185 aa17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 A0A1B0GUA9 196 aa17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 A0A1W2PQC6 194 aa17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 TRIM75PA6NK02 468 aa17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 B4DLN1 442 aa17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 CD302Q8IX05 232 aa17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 RASSF8Q8NHQ8 419 aa17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 ZNF483Q8TF39 744 aaPredicted RBP17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 IFT81Q8WYA0 676 aa17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 EEF2KMTQ96G04 330 aa17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 GDF3Q9NR23 364 aa17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 TBC1D2BQ9UPU7 963 aa17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 LEMD3Q9Y2U8 911 aa17.42■□□□□ 0.38
CSNK1A1-202ENST00000377843 H7C1W4 665 aa17.41■□□□□ 0.38
CSNK1A1-202ENST00000377843 IRX1P78414 480 aaPredicted RBP17.41■□□□□ 0.38
CSNK1A1-202ENST00000377843 CCDC96Q2M329 555 aa17.41■□□□□ 0.38
CSNK1A1-202ENST00000377843 PDXDC2PQ6P474 469 aa17.41■□□□□ 0.38
CSNK1A1-202ENST00000377843 GPIHBP1Q8IV16 184 aa17.41■□□□□ 0.38
CSNK1A1-202ENST00000377843 WASF1Q92558 559 aa17.41■□□□□ 0.38
CSNK1A1-202ENST00000377843 PDS5AQ29RF7 1337 aaKnown RBP17.41■□□□□ 0.38
CSNK1A1-202ENST00000377843 GOLGA6L7A0A1B0GV03 622 aa17.41■□□□□ 0.38
CSNK1A1-202ENST00000377843 IFIT3O14879 490 aaKnown RBP17.41■□□□□ 0.38
CSNK1A1-202ENST00000377843 TRIM58Q8NG06 486 aa17.41■□□□□ 0.38
CSNK1A1-202ENST00000377843 ZKSCAN3Q9BRR0 538 aa17.41■□□□□ 0.38
CSNK1A1-202ENST00000377843 SH2D4AQ9H788 454 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms