RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 ATP6V0A1Q93050 837 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 LRWD1Q9UFC0 647 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 MRPL11Q9Y3B7 192 aaKnown RBP7.77□□□□□ -1.17
SPTA1-201ENST00000368147 WDR46O15213 610 aaKnown RBP7.77□□□□□ -1.17
SPTA1-201ENST00000368147 TBC1D8O95759 1140 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 CCNA1P78396 465 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 BMP2KLQ5H9B9 411 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 POMGNT1Q8WZA1 660 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 PIM2Q9P1W9 311 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 STAM2O75886 525 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 CCND2P30279 289 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 ADORA1P30542 326 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 CXorf38Q8TB03 319 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 APPBP2Q92624 585 aa7.77□□□□□ -1.17
SPTA1-201ENST00000368147 FAM49AQ9H0Q0 323 aaPredicted RBP7.77□□□□□ -1.17
SPTA1-201ENST00000368147 SPECC1L-ADORA2AF8WAN1 911 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 PLCD1P51178 756 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 ADAT2Q7Z6V5 191 aaKnown RBP7.76□□□□□ -1.17
SPTA1-201ENST00000368147 CPLX4Q7Z7G2 160 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 PLA2G4DQ86XP0 818 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 MORC4Q8TE76 937 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 PIDD1Q9HB75 910 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 SBNO1A3KN83 1393 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 NEURL1BA8MQ27 555 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 M0R2C6 588 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 MAN1A2O60476 641 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 VAMP4O75379 141 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 COG7P83436 770 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 SCYL1Q96KG9 808 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 MTRQ99707 1265 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 PHKG2P15735 406 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 TMTC4Q5T4D3 741 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 CSGALNACT2Q8N6G5 542 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 CCDC127Q96BQ5 260 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 ZNF668Q96K58 619 aaPredicted RBP7.76□□□□□ -1.17
SPTA1-201ENST00000368147 ZNF341Q9BYN7 854 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 ADAMTS12P58397 1594 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 IL16Q14005 1332 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 TMEM94Q12767 1356 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 ARHGEF9O43307 516 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 ABCB4P21439 1286 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 CCDC93Q567U6 631 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 CCDC62Q6P9F0 684 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.76□□□□□ -1.17
SPTA1-201ENST00000368147 RNF10Q8N5U6 811 aaKnown RBP7.76□□□□□ -1.17
SPTA1-201ENST00000368147 C7orf31Q8N865 590 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 ATRIPQ8WXE1 791 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 CCDC124Q96CT7 223 aaKnown RBP7.76□□□□□ -1.17
SPTA1-201ENST00000368147 DRC3Q9H069 523 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 PANK4Q9NVE7 773 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 ERVV-2B6SEH9 535 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 TTBK2Q6IQ55 1244 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 METTL23Q86XA0 190 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 UNC5CLQ8IV45 518 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 TTLL6Q8N841 843 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 TMEM106CQ9BVX2 250 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 CARD14Q9BXL6 1004 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 INO80B-WBP1J3KQ70 363 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 ZNF18P17022 549 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 TBC1D8BQ0IIM8 1120 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 NONOQ15233 471 aaKnown RBP eCLIP7.76□□□□□ -1.17
SPTA1-201ENST00000368147 ANGPT1Q15389 498 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 FYB2Q5VWT5 728 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 SLFN13Q68D06 897 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 SRGAP1Q7Z6B7 1085 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 FAM186BQ8IYM0 893 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 REXO1Q8N1G1 1221 aaKnown RBP7.76□□□□□ -1.17
SPTA1-201ENST00000368147 ACRBPQ8NEB7 543 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 RAET1EQ8TD07 263 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 TEKT3Q9BXF9 490 aa7.76□□□□□ -1.17
SPTA1-201ENST00000368147 INO80BQ9C086 356 aaPredicted RBP7.76□□□□□ -1.17
SPTA1-201ENST00000368147 MLH3Q9UHC1 1453 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 PNMA6EA0A0J9YXQ4 647 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 USP17L3A6NCW0 530 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 USP17L4A6NCW7 530 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 CETN3O15182 167 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 USP17L1Q7RTZ2 530 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 RSAD2Q8WXG1 361 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 PRIMPOLQ96LW4 560 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 NLRP4Q96MN2 994 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 LSM14BQ9BX40 385 aaKnown RBP7.75□□□□□ -1.17
SPTA1-201ENST00000368147 ATF7P17544 494 aaPredicted RBP7.75□□□□□ -1.17
SPTA1-201ENST00000368147 ELF1P32519 619 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 SLC12A1Q13621 1099 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 CIAPIN1Q6FI81 312 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 MCF2L2Q86YR7 1114 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 ZSCAN10Q96SZ4 725 aaPredicted RBP7.75□□□□□ -1.17
SPTA1-201ENST00000368147 METTL14Q9HCE5 456 aaKnown RBP7.75□□□□□ -1.17
SPTA1-201ENST00000368147 SYNRGQ9UMZ2 1314 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 SAMD9Q5K651 1589 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 TYW5A2RUC4 315 aaKnown RBP7.75□□□□□ -1.17
SPTA1-201ENST00000368147 KRT83P78385 493 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 NXNQ6DKJ4 435 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 MIS18BP1Q6P0N0 1132 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 ZBTB38Q8NAP3 1195 aaPredicted RBP7.75□□□□□ -1.17
SPTA1-201ENST00000368147 RNF217Q8TC41 542 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 NELFBQ8WX92 580 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 ZNF577Q9BSK1 485 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 PPP1R12CQ9BZL4 782 aa7.75□□□□□ -1.17
SPTA1-201ENST00000368147 CTTNBP2NLQ9P2B4 639 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms