RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 ZNF503-AS2A6NEH8 195 aa5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 SUSD5O60279 629 aa5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 PSPNO60542 156 aa5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 GALK1P51570 392 aa5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 ZNF143P52747 638 aaPredicted RBP5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 POU4F1Q01851 419 aa5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 CHRNEQ04844 493 aa5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 NR0B2Q15466 257 aa5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 DPY19L1Q2PZI1 675 aa5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 TMEM67Q5HYA8 995 aa5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 SPPL2CQ8IUH8 684 aa5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 BVESQ8NE79 360 aa5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 PPP1R14AQ96A00 147 aa5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 ASIC4Q96FT7 647 aa5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 LIN37Q96GY3 246 aaPredicted RBP5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 RNF32Q9H0A6 362 aa5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 GPR55Q9Y2T6 319 aaPredicted RBP5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 EMC9Q9Y3B6 208 aa5.08□□□□□ -1.6
RNU4-48P-201ENST00000365559 FADS2P1A8MWK0 482 aa5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 STXBP3O00186 592 aa5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 FGF10O15520 208 aaPredicted RBP5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 TBX1O43435 398 aa5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 KCNH1O95259 989 aa5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 GLI1P08151 1106 aa5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 NAT2P11245 290 aa5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 KIR2DL1P43626 348 aaPredicted RBP5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 KIR2DL2P43627 348 aaPredicted RBP5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 NOP2P46087 812 aaKnown RBP5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 GRB10Q13322 594 aa5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 KIR3DS1Q14943 382 aa5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 SV2CQ496J9 727 aa5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 CEP128Q6ZU80 1094 aa5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 CKAP2LQ8IYA6 745 aa5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 SHISA4Q96DD7 197 aa5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 MRGPRX3Q96LB0 322 aa5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 TRIM55Q9BYV6 548 aa5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 TNFRSF10DQ9UBN6 386 aa5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 PPP1R1BQ9UD71 204 aaPredicted RBP5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 GPR160Q9UJ42 338 aa5.07□□□□□ -1.6
RNU4-48P-201ENST00000365559 AURKAO14965 403 aa5.06□□□□□ -1.6
RNU4-48P-201ENST00000365559 ITGAVP06756 1048 aa5.06□□□□□ -1.6
RNU4-48P-201ENST00000365559 ENDOUP21128 410 aaKnown RBP5.06□□□□□ -1.6
RNU4-48P-201ENST00000365559 RTP1P59025 263 aa5.06□□□□□ -1.6
RNU4-48P-201ENST00000365559 AMPD2Q01433 879 aa5.06□□□□□ -1.6
RNU4-48P-201ENST00000365559 SLC14A2Q15849 920 aa5.06□□□□□ -1.6
RNU4-48P-201ENST00000365559 EEPD1Q7L9B9 569 aa5.06□□□□□ -1.6
RNU4-48P-201ENST00000365559 SLCO6A1Q86UG4 719 aa5.06□□□□□ -1.6
RNU4-48P-201ENST00000365559 TRIM59Q8IWR1 403 aa5.06□□□□□ -1.6
RNU4-48P-201ENST00000365559 LILRA2Q8N149 483 aa5.06□□□□□ -1.6
RNU4-48P-201ENST00000365559 NAT16Q8N8M0 369 aa5.06□□□□□ -1.6
RNU4-48P-201ENST00000365559 PTCHD1Q96NR3 888 aa5.06□□□□□ -1.6
RNU4-48P-201ENST00000365559 PLCD4Q9BRC7 762 aa5.06□□□□□ -1.6
RNU4-48P-201ENST00000365559 RNF114Q9Y508 228 aa5.06□□□□□ -1.6
RNU4-48P-201ENST00000365559 C2orf71A6NGG8 1288 aa5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 NOP56O00567 594 aaKnown RBP5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 PAX4O43316 350 aa5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 NRDCO43847 1150 aa5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 RBL2Q08999 1139 aa5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 SLC10A6Q3KNW5 377 aa5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 HSF5Q4G112 596 aaPredicted RBP5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 GTF2IRD2BQ6EKJ0 949 aa5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 RCSD1Q6JBY9 416 aa5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 POMZP3Q6PJE2 187 aa5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 GTF2IRD2Q86UP8 949 aa5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 NLRX1Q86UT6 975 aa5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 ZNF227Q86WZ6 799 aa5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 SIRT2Q8IXJ6 389 aa5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 BTN2A2Q8WVV5 523 aa5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 SREK1Q8WXA9 508 aaKnown RBP5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 ARMC5Q96C12 935 aa5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 JMJD8Q96S16 334 aa5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 BACE2Q9Y5Z0 518 aa5.05□□□□□ -1.6
RNU4-48P-201ENST00000365559 A0A1W2PQ45 241 aaPredicted RBP5.04□□□□□ -1.6
RNU4-48P-201ENST00000365559 A0A1W2PQY0 241 aa5.04□□□□□ -1.6
RNU4-48P-201ENST00000365559 CYP4F3Q08477 520 aa5.04□□□□□ -1.6
RNU4-48P-201ENST00000365559 SCRN1Q12765 414 aa5.04□□□□□ -1.6
RNU4-48P-201ENST00000365559 SNX17Q15036 470 aa5.04□□□□□ -1.6
RNU4-48P-201ENST00000365559 SF3A1Q15459 793 aaKnown RBP5.04□□□□□ -1.6
RNU4-48P-201ENST00000365559 EEF1DP3Q658K8 133 aa5.04□□□□□ -1.6
RNU4-48P-201ENST00000365559 MPZL3Q6UWV2 235 aa5.04□□□□□ -1.6
RNU4-48P-201ENST00000365559 PRR23BQ6ZRT6 265 aa5.04□□□□□ -1.6
RNU4-48P-201ENST00000365559 CRACR2BQ8N4Y2 399 aaPredicted RBP5.04□□□□□ -1.6
RNU4-48P-201ENST00000365559 FMNL2Q96PY5 1086 aa5.04□□□□□ -1.6
RNU4-48P-201ENST00000365559 KCNK12Q9HB15 430 aa5.04□□□□□ -1.6
RNU4-48P-201ENST00000365559 GPRC5CQ9NQ84 441 aa5.04□□□□□ -1.6
RNU4-48P-201ENST00000365559 LRP2BPQ9P2M1 347 aa5.04□□□□□ -1.6
RNU4-48P-201ENST00000365559 YBX2Q9Y2T7 364 aaKnown RBP5.04□□□□□ -1.6
RNU4-48P-201ENST00000365559 MSRB2Q9Y3D2 182 aa5.04□□□□□ -1.6
RNU4-48P-201ENST00000365559 TAF6LQ9Y6J9 622 aa5.04□□□□□ -1.6
RNU4-48P-201ENST00000365559 A0A1W2PQU0 124 aa5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 LRRC10BA6NIK2 292 aa5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 WTIPA6NIX2 430 aaPredicted RBP5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 CCDC85CA6NKD9 419 aa5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 SEPHS1P49903 392 aa5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 SERINC3Q13530 473 aa5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 SF1Q15637 639 aaKnown RBP5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 MLANAQ16655 118 aa5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 NBPF6Q5VWK0 638 aa5.03□□□□□ -1.6
RNU4-48P-201ENST00000365559 HLA-DQA1Q5Y7H0 255 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms