RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 HHIPL1Q96JK4 782 aa16.47■□□□□ 0.23
USP6-202ENST00000357482 SPATA32Q96LK8 384 aa16.47■□□□□ 0.23
USP6-202ENST00000357482 TTC14Q96N46 770 aa16.47■□□□□ 0.23
USP6-202ENST00000357482 PLEKHA4Q9H4M7 779 aa16.47■□□□□ 0.23
USP6-202ENST00000357482 PALD1Q9ULE6 856 aa16.47■□□□□ 0.23
USP6-202ENST00000357482 RIPOR2Q9Y4F9 1068 aa16.47■□□□□ 0.23
USP6-202ENST00000357482 PITPNM2Q9BZ72 1349 aa16.47■□□□□ 0.23
USP6-202ENST00000357482 ERICH2A1L162 156 aa16.47■□□□□ 0.23
USP6-202ENST00000357482 MYO1FO00160 1098 aa16.47■□□□□ 0.23
USP6-202ENST00000357482 WNT10BO00744 389 aa16.47■□□□□ 0.23
USP6-202ENST00000357482 CUTAO60888 179 aa16.47■□□□□ 0.23
USP6-202ENST00000357482 FAM163BP0C2L3 166 aa16.47■□□□□ 0.23
USP6-202ENST00000357482 GYG1P46976 350 aa16.47■□□□□ 0.23
USP6-202ENST00000357482 HHATQ5VTY9 493 aa16.47■□□□□ 0.23
USP6-202ENST00000357482 LMBR1Q8WVP7 490 aa16.47■□□□□ 0.23
USP6-202ENST00000357482 LARP6Q9BRS8 491 aaKnown RBP16.47■□□□□ 0.23
USP6-202ENST00000357482 ZNF646O15015 1829 aaPredicted RBP16.46■□□□□ 0.23
USP6-202ENST00000357482 ZEB2O60315 1214 aa16.46■□□□□ 0.23
USP6-202ENST00000357482 SURF6O75683 361 aaKnown RBP16.46■□□□□ 0.23
USP6-202ENST00000357482 GJB2P29033 226 aa16.46■□□□□ 0.23
USP6-202ENST00000357482 HIBADHP31937 336 aaKnown RBP16.46■□□□□ 0.23
USP6-202ENST00000357482 GNG11P61952 73 aa16.46■□□□□ 0.23
USP6-202ENST00000357482 TMC6Q7Z403 805 aa16.46■□□□□ 0.23
USP6-202ENST00000357482 RGL1Q9NZL6 768 aa16.46■□□□□ 0.23
USP6-202ENST00000357482 VWA3AA6NCI4 1184 aa16.45■□□□□ 0.22
USP6-202ENST00000357482 SYF2O95926 243 aaKnown RBP16.45■□□□□ 0.22
USP6-202ENST00000357482 G3BP1Q13283 466 aaKnown RBP eCLIP16.45■□□□□ 0.22
USP6-202ENST00000357482 DLGAP5Q15398 846 aa16.45■□□□□ 0.22
USP6-202ENST00000357482 SF3A1Q15459 793 aaKnown RBP16.45■□□□□ 0.22
USP6-202ENST00000357482 CCDC38Q502W7 563 aa16.45■□□□□ 0.22
USP6-202ENST00000357482 PARP9Q8IXQ6 854 aa16.45■□□□□ 0.22
USP6-202ENST00000357482 SPDYE1Q8NFV5 336 aaPredicted RBP16.45■□□□□ 0.22
USP6-202ENST00000357482 CCDC47Q96A33 483 aaKnown RBP16.45■□□□□ 0.22
USP6-202ENST00000357482 CCDC97Q96F63 343 aaPredicted RBP16.45■□□□□ 0.22
USP6-202ENST00000357482 CAPS2Q9BXY5 557 aa16.45■□□□□ 0.22
USP6-202ENST00000357482 U3KPZ7 1027 aaPredicted RBP16.45■□□□□ 0.22
USP6-202ENST00000357482 PDLIM1O00151 329 aa16.45■□□□□ 0.22
USP6-202ENST00000357482 CBFA2T2O43439 604 aa16.45■□□□□ 0.22
USP6-202ENST00000357482 RAB11FIP3O75154 756 aa16.45■□□□□ 0.22
USP6-202ENST00000357482 CAPRIN2Q6IMN6 1127 aaKnown RBP16.45■□□□□ 0.22
USP6-202ENST00000357482 CERS5Q8N5B7 392 aa16.45■□□□□ 0.22
USP6-202ENST00000357482 KIFC2Q96AC6 838 aa16.45■□□□□ 0.22
USP6-202ENST00000357482 ZBTB10Q96DT7 871 aa16.45■□□□□ 0.22
USP6-202ENST00000357482 ANO2Q9NQ90 1003 aa16.45■□□□□ 0.22
USP6-202ENST00000357482 CDC23Q9UJX2 597 aa16.45■□□□□ 0.22
USP6-202ENST00000357482 CORO1CQ9ULV4 474 aaPredicted RBP16.45■□□□□ 0.22
USP6-202ENST00000357482 MYO1BO43795 1136 aa16.44■□□□□ 0.22
USP6-202ENST00000357482 ATP5JP18859 108 aa16.44■□□□□ 0.22
USP6-202ENST00000357482 ZNF157P51786 506 aaPredicted RBP16.44■□□□□ 0.22
USP6-202ENST00000357482 LBX1P52954 281 aa16.44■□□□□ 0.22
USP6-202ENST00000357482 NAP1L1P55209 391 aaKnown RBP16.44■□□□□ 0.22
USP6-202ENST00000357482 TTLL12Q14166 644 aaPredicted RBP16.44■□□□□ 0.22
USP6-202ENST00000357482 CAVIN4Q5BKX8 364 aa16.44■□□□□ 0.22
USP6-202ENST00000357482 PRAMEF18Q5VWM3 479 aa16.44■□□□□ 0.22
USP6-202ENST00000357482 CWF19L1Q69YN2 538 aaKnown RBP16.44■□□□□ 0.22
USP6-202ENST00000357482 RGMBQ6NW40 437 aa16.44■□□□□ 0.22
USP6-202ENST00000357482 SLC30A9Q6PML9 568 aa16.44■□□□□ 0.22
USP6-202ENST00000357482 C11orf57Q6ZUT1 292 aaPredicted RBP16.44■□□□□ 0.22
USP6-202ENST00000357482 SPATA21Q7Z572 469 aa16.44■□□□□ 0.22
USP6-202ENST00000357482 IGSF22Q8N9C0 903 aa16.44■□□□□ 0.22
USP6-202ENST00000357482 MIPOL1Q8TD10 442 aa16.44■□□□□ 0.22
USP6-202ENST00000357482 ZFAND2BQ8WV99 257 aa16.44■□□□□ 0.22
USP6-202ENST00000357482 EZH1Q92800 747 aaPredicted RBP16.44■□□□□ 0.22
USP6-202ENST00000357482 DTNBP1Q96EV8 351 aa16.44■□□□□ 0.22
USP6-202ENST00000357482 BLOC1S6Q9UL45 172 aa16.44■□□□□ 0.22
USP6-202ENST00000357482 THSD7BQ9C0I4 1608 aa16.44■□□□□ 0.22
USP6-202ENST00000357482 SALL3Q9BXA9 1300 aa16.44■□□□□ 0.22
USP6-202ENST00000357482 WDHD1O75717 1129 aaPredicted RBP16.43■□□□□ 0.22
USP6-202ENST00000357482 FERP16591 822 aa16.43■□□□□ 0.22
USP6-202ENST00000357482 GCLCP48506 637 aaPredicted RBP16.43■□□□□ 0.22
USP6-202ENST00000357482 LEO1Q8WVC0 666 aaPredicted RBP16.43■□□□□ 0.22
USP6-202ENST00000357482 FAM84BQ96KN1 310 aaPredicted RBP16.43■□□□□ 0.22
USP6-202ENST00000357482 PLEKHG4BQ96PX9 1271 aa16.43■□□□□ 0.22
USP6-202ENST00000357482 UPF3BQ9BZI7 483 aaKnown RBP16.43■□□□□ 0.22
USP6-202ENST00000357482 IQSEC3Q9UPP2 1182 aaPredicted RBP16.43■□□□□ 0.22
USP6-202ENST00000357482 PPP2R2CQ9Y2T4 447 aa16.43■□□□□ 0.22
USP6-202ENST00000357482 GOLGA6L10A6NI86 522 aa16.43■□□□□ 0.22
USP6-202ENST00000357482 SRRM3A6NNA2 597 aaPredicted RBP16.43■□□□□ 0.22
USP6-202ENST00000357482 PPFIA3O75145 1194 aa16.43■□□□□ 0.22
USP6-202ENST00000357482 PDE8BO95263 885 aa16.43■□□□□ 0.22
USP6-202ENST00000357482 ROR2Q01974 943 aaKnown RBP16.43■□□□□ 0.22
USP6-202ENST00000357482 NOGQ13253 232 aa16.43■□□□□ 0.22
USP6-202ENST00000357482 MFSD14BQ5SR56 506 aa16.43■□□□□ 0.22
USP6-202ENST00000357482 CEP57Q86XR8 500 aa16.43■□□□□ 0.22
USP6-202ENST00000357482 APOBEC3FQ8IUX4 373 aaKnown RBP16.43■□□□□ 0.22
USP6-202ENST00000357482 TRIM58Q8NG06 486 aa16.43■□□□□ 0.22
USP6-202ENST00000357482 SIL1Q9H173 461 aa16.43■□□□□ 0.22
USP6-202ENST00000357482 KAT14Q9H8E8 782 aa16.43■□□□□ 0.22
USP6-202ENST00000357482 PHACTR2O75167 634 aa16.42■□□□□ 0.22
USP6-202ENST00000357482 NR1I2O75469 434 aa16.42■□□□□ 0.22
USP6-202ENST00000357482 PDE1AP54750 535 aa16.42■□□□□ 0.22
USP6-202ENST00000357482 SFSWAPQ12872 951 aaKnown RBP16.42■□□□□ 0.22
USP6-202ENST00000357482 LAMB3Q13751 1172 aa16.42■□□□□ 0.22
USP6-202ENST00000357482 HSP90AB4PQ58FF6 505 aa16.42■□□□□ 0.22
USP6-202ENST00000357482 RHPN1Q8TCX5 695 aa16.42■□□□□ 0.22
USP6-202ENST00000357482 ALS2CR12Q96Q35 445 aa16.42■□□□□ 0.22
USP6-202ENST00000357482 GOPCQ9HD26 462 aa16.42■□□□□ 0.22
USP6-202ENST00000357482 PA2G4Q9UQ80 394 aaKnown RBP16.42■□□□□ 0.22
USP6-202ENST00000357482 EYA2O00167 538 aa16.41■□□□□ 0.22
USP6-202ENST00000357482 FANCGO15287 622 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms