RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 XKR9Q5GH70 373 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 DPY19L2Q6NUT2 758 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 ZNF713Q8N859 430 aaPredicted RBP7.08□□□□□ -1.28
UPF2-201ENST00000356352 SUCLG2Q96I99 432 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 GBP5Q96PP8 586 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 NBPF3Q9H094 633 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 EVI5O60447 810 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 RNF8O76064 485 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 CYP2J2P51589 502 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 CCNA1P78396 465 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 NXNQ6DKJ4 435 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 JADE1Q6IE81 842 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 SCYL2Q6P3W7 929 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 PNMA8AQ86V59 439 aaPredicted RBP7.08□□□□□ -1.28
UPF2-201ENST00000356352 FBXO11Q86XK2 927 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 TTC1Q99614 292 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 FAM207AQ9NSI2 230 aaPredicted RBP7.08□□□□□ -1.28
UPF2-201ENST00000356352 LARSQ9P2J5 1176 aaKnown RBP7.08□□□□□ -1.28
UPF2-201ENST00000356352 DDX25Q9UHL0 483 aaKnown RBP7.08□□□□□ -1.28
UPF2-201ENST00000356352 DDX41Q9UJV9 622 aaKnown RBP7.08□□□□□ -1.28
UPF2-201ENST00000356352 MAST1Q9Y2H9 1570 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 ERBB4Q15303 1308 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 INSRP06213 1382 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 ZMYM4Q5VZL5 1548 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 DNAJC8O75937 253 aaPredicted RBP7.08□□□□□ -1.28
UPF2-201ENST00000356352 ZAP70P43403 619 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 MFAP3P55082 362 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 COG7P83436 770 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 RAD51AP2Q09MP3 1159 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 NOSTRINQ8IVI9 506 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 MYRIPQ8NFW9 859 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 LRGUKQ96M69 825 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 MMS19Q96T76 1030 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 STK17AQ9UEE5 414 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 SERTAD1Q9UHV2 236 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 ATP10DQ9P241 1426 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 NCKAP5LQ9HCH0 1330 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 SEMA3EO15041 775 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 LUC7L3O95232 432 aaKnown RBP7.08□□□□□ -1.28
UPF2-201ENST00000356352 GAP43P17677 238 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 ERCC3P19447 782 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 IL13P35225 146 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 TCP10Q12799 353 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 BFSP1Q12934 665 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 BSPRYQ5W0U4 402 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 PHKBQ93100 1093 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 FAM227BQ96M60 508 aa7.08□□□□□ -1.28
UPF2-201ENST00000356352 TCOF1Q13428 1488 aaKnown RBP7.08□□□□□ -1.28
UPF2-201ENST00000356352 ARHGAP42A6NI28 874 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 CHL1O00533 1208 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 TAF5LO75529 589 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 OAS2P29728 719 aaKnown RBP7.07□□□□□ -1.28
UPF2-201ENST00000356352 USP14P54578 494 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 ELF2Q15723 593 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 FAM47CQ5HY64 1035 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 TMC4Q7Z404 712 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 METTL23Q86XA0 190 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 FAM178BQ8IXR5 827 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 DCPSQ96C86 337 aaKnown RBP7.07□□□□□ -1.28
UPF2-201ENST00000356352 PHACTR3Q96KR7 559 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 RPS6KC1Q96S38 1066 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 ANO3Q9BYT9 981 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 BLZF1Q9H2G9 400 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 HAUS4Q9H6D7 363 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 VPS54Q9P1Q0 977 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 PCDHA12Q9UN75 941 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 KCNJ14Q9UNX9 436 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 ATP10BO94823 1461 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 ZMYM3Q14202 1370 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 BLMP54132 1417 aaPredicted RBP7.07□□□□□ -1.28
UPF2-201ENST00000356352 KCNK3O14649 394 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 RLBP1P12271 317 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 PIK3CAP42336 1068 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 NSFP46459 744 aaKnown RBP7.07□□□□□ -1.28
UPF2-201ENST00000356352 POLGP54098 1239 aaPredicted RBP7.07□□□□□ -1.28
UPF2-201ENST00000356352 RPS8P62241 208 aaKnown RBP7.07□□□□□ -1.28
UPF2-201ENST00000356352 ANKRD20A4Q4UJ75 823 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 PRR16Q569H4 304 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 ANKRD20A8PQ5CZ79 823 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 ANKRD20A2Q5SQ80 823 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 ANKRD20A1Q5TYW2 823 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 MYSM1Q5VVJ2 828 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 ARMCX5Q6P1M9 558 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 ELMSAN1Q6PJG2 1045 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 TTLL7Q6ZT98 887 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 ANKRD42Q8N9B4 389 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 ZC3H15Q8WU90 426 aaKnown RBP7.07□□□□□ -1.28
UPF2-201ENST00000356352 USP19O94966 1318 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 HEXIM1O94992 359 aaKnown RBP7.07□□□□□ -1.28
UPF2-201ENST00000356352 CPA1P15085 419 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 SLC8A1P32418 973 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 INPP1P49441 399 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 LRMPQ12912 555 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 MFSD14BQ5SR56 506 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 ANKRD36BP1Q96IX9 119 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 ZNF594Q96JF6 807 aaPredicted RBP7.07□□□□□ -1.28
UPF2-201ENST00000356352 TTI1O43156 1089 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 KCNA6P17658 529 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 STX1BP61266 288 aa7.07□□□□□ -1.28
UPF2-201ENST00000356352 PNOCQ13519 176 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms