RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 TYW1Q9NV66 732 aaKnown RBP17.99■□□□□ 0.47
SMAD3-201ENST00000327367 TPCN1Q9ULQ1 816 aa17.99■□□□□ 0.47
SMAD3-201ENST00000327367 EXOC7Q9UPT5 735 aa17.99■□□□□ 0.47
SMAD3-201ENST00000327367 MRPL12P52815 198 aaKnown RBP17.98■□□□□ 0.47
SMAD3-201ENST00000327367 MESDQ14696 234 aa17.98■□□□□ 0.47
SMAD3-201ENST00000327367 RAPH1Q70E73 1250 aa17.98■□□□□ 0.47
SMAD3-201ENST00000327367 GSPT2Q8IYD1 628 aaKnown RBP17.98■□□□□ 0.47
SMAD3-201ENST00000327367 MAML1Q92585 1016 aa17.98■□□□□ 0.47
SMAD3-201ENST00000327367 ANGPTL2Q9UKU9 493 aa17.98■□□□□ 0.47
SMAD3-201ENST00000327367 PASKQ96RG2 1323 aa17.98■□□□□ 0.47
SMAD3-201ENST00000327367 ATP8B1O43520 1251 aa17.98■□□□□ 0.47
SMAD3-201ENST00000327367 LDHBP07195 334 aaKnown RBP17.98■□□□□ 0.47
SMAD3-201ENST00000327367 MYSM1Q5VVJ2 828 aa17.98■□□□□ 0.47
SMAD3-201ENST00000327367 MTMR6Q9Y217 621 aa17.98■□□□□ 0.47
SMAD3-201ENST00000327367 PNMA6EA0A0J9YXQ4 647 aa17.98■□□□□ 0.47
SMAD3-201ENST00000327367 EXOC5O00471 708 aa17.98■□□□□ 0.47
SMAD3-201ENST00000327367 SYF2O95926 243 aaKnown RBP17.98■□□□□ 0.47
SMAD3-201ENST00000327367 ST5P78524 1137 aa17.98■□□□□ 0.47
SMAD3-201ENST00000327367 DHX9Q08211 1270 aaKnown RBP17.98■□□□□ 0.47
SMAD3-201ENST00000327367 LZTS1Q9Y250 596 aa17.98■□□□□ 0.47
SMAD3-201ENST00000327367 SGK1O00141 431 aa17.98■□□□□ 0.47
SMAD3-201ENST00000327367 INHBAP08476 426 aa17.98■□□□□ 0.47
SMAD3-201ENST00000327367 ITKQ08881 620 aa17.98■□□□□ 0.47
SMAD3-201ENST00000327367 NONOQ15233 471 aaKnown RBP eCLIP17.98■□□□□ 0.472e-6■■■□□ 19.1
SMAD3-201ENST00000327367 CCDC117Q8IWD4 279 aaPredicted RBP17.98■□□□□ 0.47
SMAD3-201ENST00000327367 OGFOD1Q8N543 542 aa17.98■□□□□ 0.47
SMAD3-201ENST00000327367 MAGOHBQ96A72 148 aaKnown RBP17.98■□□□□ 0.47
SMAD3-201ENST00000327367 EDC3Q96F86 508 aaKnown RBP17.98■□□□□ 0.47
SMAD3-201ENST00000327367 E7EWF7 191 aa17.97■□□□□ 0.47
SMAD3-201ENST00000327367 XRCC5P13010 732 aaKnown RBP17.97■□□□□ 0.47
SMAD3-201ENST00000327367 PCYT1AP49585 367 aa17.97■□□□□ 0.47
SMAD3-201ENST00000327367 TEX13AQ9BXU3 409 aaPredicted RBP17.97■□□□□ 0.47
SMAD3-201ENST00000327367 EPS15L1Q9UBC2 864 aa17.97■□□□□ 0.47
SMAD3-201ENST00000327367 ACEP12821 1306 aa17.97■□□□□ 0.47
SMAD3-201ENST00000327367 TOM1L1O75674 476 aa17.97■□□□□ 0.47
SMAD3-201ENST00000327367 BFSP1Q12934 665 aa17.97■□□□□ 0.47
SMAD3-201ENST00000327367 TPH2Q8IWU9 490 aa17.97■□□□□ 0.47
SMAD3-201ENST00000327367 GPC4O75487 556 aa17.97■□□□□ 0.47
SMAD3-201ENST00000327367 TTC6Q86TZ1 520 aa17.97■□□□□ 0.47
SMAD3-201ENST00000327367 TRIM56Q9BRZ2 755 aaKnown RBP17.97■□□□□ 0.47
SMAD3-201ENST00000327367 CACYBPQ9HB71 228 aaKnown RBP17.97■□□□□ 0.47
SMAD3-201ENST00000327367 PHLPP2Q6ZVD8 1323 aa17.97■□□□□ 0.47
SMAD3-201ENST00000327367 STAM2O75886 525 aa17.97■□□□□ 0.47
SMAD3-201ENST00000327367 PMS1P54277 932 aaKnown RBP17.97■□□□□ 0.47
SMAD3-201ENST00000327367 PTH1RQ03431 593 aa17.97■□□□□ 0.47
SMAD3-201ENST00000327367 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.97■□□□□ 0.47
SMAD3-201ENST00000327367 KRT14P02533 472 aa17.97■□□□□ 0.47
SMAD3-201ENST00000327367 EIF4A2Q14240 407 aaKnown RBP17.97■□□□□ 0.47
SMAD3-201ENST00000327367 LINS1Q8NG48 757 aa17.97■□□□□ 0.47
SMAD3-201ENST00000327367 SUFUQ9UMX1 484 aa17.97■□□□□ 0.47
SMAD3-201ENST00000327367 NOS1P29475 1434 aa17.96■□□□□ 0.47
SMAD3-201ENST00000327367 HNRNPCP07910 306 aaKnown RBP eCLIP17.96■□□□□ 0.472e-6■■■□□ 14.8
SMAD3-201ENST00000327367 COPB1P53618 953 aaKnown RBP17.96■□□□□ 0.47
SMAD3-201ENST00000327367 GRM1Q13255 1194 aa17.96■□□□□ 0.47
SMAD3-201ENST00000327367 FAM47AQ5JRC9 791 aa17.96■□□□□ 0.47
SMAD3-201ENST00000327367 GPBP1Q86WP2 473 aa17.96■□□□□ 0.47
SMAD3-201ENST00000327367 AP1M1Q9BXS5 423 aa17.96■□□□□ 0.47
SMAD3-201ENST00000327367 SYNJ2BP-COX16A0A087WUM0 186 aa17.96■□□□□ 0.47
SMAD3-201ENST00000327367 CDC25BP30305 580 aa17.96■□□□□ 0.47
SMAD3-201ENST00000327367 DNM2P50570 870 aa17.96■□□□□ 0.47
SMAD3-201ENST00000327367 ADCY7P51828 1080 aa17.96■□□□□ 0.47
SMAD3-201ENST00000327367 NAP1L4Q99733 375 aaKnown RBP17.96■□□□□ 0.47
SMAD3-201ENST00000327367 COX16Q9P0S2 106 aa17.96■□□□□ 0.47
SMAD3-201ENST00000327367 ARID5BQ14865 1188 aa17.96■□□□□ 0.47
SMAD3-201ENST00000327367 LRRC59Q96AG4 307 aaKnown RBP17.96■□□□□ 0.47
SMAD3-201ENST00000327367 PTPN23Q9H3S7 1636 aa17.96■□□□□ 0.47
SMAD3-201ENST00000327367 GSPT1P15170 499 aaKnown RBP17.96■□□□□ 0.47
SMAD3-201ENST00000327367 RFX8Q6ZV50 586 aa17.96■□□□□ 0.47
SMAD3-201ENST00000327367 DRC3Q9H069 523 aa17.96■□□□□ 0.47
SMAD3-201ENST00000327367 PRPF6O94906 941 aaKnown RBP17.95■□□□□ 0.46
SMAD3-201ENST00000327367 SETDB2Q96T68 719 aa17.95■□□□□ 0.46
SMAD3-201ENST00000327367 AATFQ9NY61 560 aaKnown RBP eCLIP17.95■□□□□ 0.46
SMAD3-201ENST00000327367 CAPN11Q9UMQ6 739 aa17.95■□□□□ 0.46
SMAD3-201ENST00000327367 DPCR1Q3MIW9 517 aa17.95■□□□□ 0.46
SMAD3-201ENST00000327367 XAGE2Q96GT9 111 aa17.95■□□□□ 0.46
SMAD3-201ENST00000327367 HECW1Q76N89 1606 aa17.95■□□□□ 0.46
SMAD3-201ENST00000327367 NAA30Q147X3 362 aaPredicted RBP17.95■□□□□ 0.46
SMAD3-201ENST00000327367 OSBPL1AQ9BXW6 950 aa17.95■□□□□ 0.46
SMAD3-201ENST00000327367 SPDYE16A6NNV3 312 aaPredicted RBP17.95■□□□□ 0.46
SMAD3-201ENST00000327367 SPDYE2Q495Y8 402 aa17.95■□□□□ 0.46
SMAD3-201ENST00000327367 SMYD3Q9H7B4 428 aa17.95■□□□□ 0.46
SMAD3-201ENST00000327367 RPN1P04843 607 aaKnown RBP17.95■□□□□ 0.46
SMAD3-201ENST00000327367 ESRRAP11474 423 aaPredicted RBP17.95■□□□□ 0.46
SMAD3-201ENST00000327367 NFATC2IPQ8NCF5 419 aa17.95■□□□□ 0.46
SMAD3-201ENST00000327367 METTL14Q9HCE5 456 aaKnown RBP17.95■□□□□ 0.46
SMAD3-201ENST00000327367 PRXQ9BXM0 1461 aa17.95■□□□□ 0.46
SMAD3-201ENST00000327367 PDE1BQ01064 536 aa17.94■□□□□ 0.46
SMAD3-201ENST00000327367 CCDC92Q53HC0 331 aaPredicted RBP17.94■□□□□ 0.46
SMAD3-201ENST00000327367 SKOR1P84550 965 aa17.94■□□□□ 0.46
SMAD3-201ENST00000327367 C4orf50Q6ZRC1 276 aa17.94■□□□□ 0.46
SMAD3-201ENST00000327367 GRAMD1CQ8IYS0 662 aa17.94■□□□□ 0.46
SMAD3-201ENST00000327367 MYOCDQ8IZQ8 938 aa17.94■□□□□ 0.46
SMAD3-201ENST00000327367 ZCCHC17Q9NP64 241 aaKnown RBP17.94■□□□□ 0.46
SMAD3-201ENST00000327367 LONP1P36776 959 aaKnown RBP17.94■□□□□ 0.46
SMAD3-201ENST00000327367 PSMC1P62191 440 aaKnown RBP17.94■□□□□ 0.46
SMAD3-201ENST00000327367 NSMCE1Q8WV22 266 aa17.94■□□□□ 0.46
SMAD3-201ENST00000327367 EPC1Q9H2F5 836 aa17.94■□□□□ 0.46
SMAD3-201ENST00000327367 PANK4Q9NVE7 773 aa17.94■□□□□ 0.46
SMAD3-201ENST00000327367 ORC6Q9Y5N6 252 aa17.94■□□□□ 0.46
SMAD3-201ENST00000327367 ATXN8OSP0DMR3 200 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms