RNA–Protein interactions for RNA: ENST00000324266.9

TRAPPC12-201, Transcript of trafficking protein particle complex 12, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAPPC12, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-201ENST00000324266 TROAPQ12815 778 aa20.28■□□□□ 0.84
TRAPPC12-201ENST00000324266 WWC2Q6AWC2 1192 aa20.28■□□□□ 0.84
TRAPPC12-201ENST00000324266 FAM71BQ8TC56 605 aa20.28■□□□□ 0.84
TRAPPC12-201ENST00000324266 N4BP2L2Q92802 583 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC12-201ENST00000324266 ACSBG1Q96GR2 724 aa20.28■□□□□ 0.84
TRAPPC12-201ENST00000324266 NUP88Q99567 741 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC12-201ENST00000324266 IL17AQ16552 155 aa20.28■□□□□ 0.84
TRAPPC12-201ENST00000324266 BEND6Q5SZJ8 279 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC12-201ENST00000324266 PIK3AP1Q6ZUJ8 805 aa20.28■□□□□ 0.84
TRAPPC12-201ENST00000324266 HNRNPLLQ8WVV9 542 aaKnown RBP20.28■□□□□ 0.84
TRAPPC12-201ENST00000324266 ABHD10Q9NUJ1 306 aa20.28■□□□□ 0.84
TRAPPC12-201ENST00000324266 ANAPC4Q9UJX5 808 aa20.28■□□□□ 0.84
TRAPPC12-201ENST00000324266 SEMA3EO15041 775 aa20.27■□□□□ 0.84
TRAPPC12-201ENST00000324266 MCM7P33993 719 aa20.27■□□□□ 0.84
TRAPPC12-201ENST00000324266 ATP2C1P98194 919 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC12-201ENST00000324266 SLF1Q9BQI6 1058 aa20.27■□□□□ 0.84
TRAPPC12-201ENST00000324266 COPB1P53618 953 aaKnown RBP20.27■□□□□ 0.84
TRAPPC12-201ENST00000324266 PPP2R5BQ15173 497 aa20.27■□□□□ 0.84
TRAPPC12-201ENST00000324266 CCDC152Q4G0S7 254 aa20.27■□□□□ 0.84
TRAPPC12-201ENST00000324266 SRBD1Q8N5C6 995 aaKnown RBP20.27■□□□□ 0.84
TRAPPC12-201ENST00000324266 CTCFLQ8NI51 663 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC12-201ENST00000324266 GJD4Q96KN9 370 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC12-201ENST00000324266 RIOK1Q9BRS2 568 aaKnown RBP20.27■□□□□ 0.84
TRAPPC12-201ENST00000324266 ABCB6Q9NP58 842 aa20.27■□□□□ 0.84
TRAPPC12-201ENST00000324266 DDR1Q08345 913 aa20.26■□□□□ 0.83
TRAPPC12-201ENST00000324266 TTF2Q9UNY4 1162 aaKnown RBP20.26■□□□□ 0.83
TRAPPC12-201ENST00000324266 GDAQ9Y2T3 454 aa20.26■□□□□ 0.83
TRAPPC12-201ENST00000324266 ZBTB12Q9Y330 459 aaPredicted RBP20.26■□□□□ 0.83
TRAPPC12-201ENST00000324266 ARHGAP25P42331 645 aa20.26■□□□□ 0.83
TRAPPC12-201ENST00000324266 PDXDC2PQ6P474 469 aa20.26■□□□□ 0.83
TRAPPC12-201ENST00000324266 TMTC3Q6ZXV5 915 aa20.26■□□□□ 0.83
TRAPPC12-201ENST00000324266 NELFBQ8WX92 580 aa20.26■□□□□ 0.83
TRAPPC12-201ENST00000324266 LIMA1Q9UHB6 759 aaKnown RBP20.26■□□□□ 0.83
TRAPPC12-201ENST00000324266 ITIH6Q6UXX5 1313 aa20.26■□□□□ 0.83
TRAPPC12-201ENST00000324266 BMP15O95972 392 aa20.25■□□□□ 0.83
TRAPPC12-201ENST00000324266 IQCA1Q86XH1 822 aa20.25■□□□□ 0.83
TRAPPC12-201ENST00000324266 TMTC1Q8IUR5 882 aa20.25■□□□□ 0.83
TRAPPC12-201ENST00000324266 PRPF38AQ8NAV1 312 aaKnown RBP20.25■□□□□ 0.83
TRAPPC12-201ENST00000324266 CCDC51Q96ER9 411 aa20.25■□□□□ 0.83
TRAPPC12-201ENST00000324266 CHP1Q99653 195 aa20.25■□□□□ 0.83
TRAPPC12-201ENST00000324266 TRIM10Q9UDY6 481 aa20.25■□□□□ 0.83
TRAPPC12-201ENST00000324266 KCNJ18B7U540 433 aa20.25■□□□□ 0.83
TRAPPC12-201ENST00000324266 FECHP22830 423 aa20.25■□□□□ 0.83
TRAPPC12-201ENST00000324266 KRT9P35527 623 aa20.25■□□□□ 0.83
TRAPPC12-201ENST00000324266 PAK1Q13153 545 aa20.25■□□□□ 0.83
TRAPPC12-201ENST00000324266 KCNJ12Q14500 433 aa20.25■□□□□ 0.83
TRAPPC12-201ENST00000324266 HSP90B2PQ58FF3 399 aa20.25■□□□□ 0.83
TRAPPC12-201ENST00000324266 POTEDQ86YR6 584 aa20.25■□□□□ 0.83
TRAPPC12-201ENST00000324266 NAPGQ99747 312 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC12-201ENST00000324266 FAM204AQ9H8W3 233 aa20.25■□□□□ 0.83
TRAPPC12-201ENST00000324266 CNTNAP5Q8WYK1 1306 aa20.25■□□□□ 0.83
TRAPPC12-201ENST00000324266 COL4A1P02462 1669 aa20.24■□□□□ 0.83
TRAPPC12-201ENST00000324266 NF2P35240 595 aa20.24■□□□□ 0.83
TRAPPC12-201ENST00000324266 NLRP5P59047 1200 aa20.24■□□□□ 0.83
TRAPPC12-201ENST00000324266 VSNL1P62760 191 aa20.24■□□□□ 0.83
TRAPPC12-201ENST00000324266 TBC1D8BQ0IIM8 1120 aa20.24■□□□□ 0.83
TRAPPC12-201ENST00000324266 TCP11X2Q5H9J9 407 aa20.24■□□□□ 0.83
TRAPPC12-201ENST00000324266 FAM47AQ5JRC9 791 aa20.24■□□□□ 0.83
TRAPPC12-201ENST00000324266 MSANTD4Q8NCY6 345 aa20.24■□□□□ 0.83
TRAPPC12-201ENST00000324266 CABS1Q96KC9 395 aa20.24■□□□□ 0.83
TRAPPC12-201ENST00000324266 RWDD2AQ9UIY3 292 aa20.24■□□□□ 0.83
TRAPPC12-201ENST00000324266 RAB21Q9UL25 225 aa20.24■□□□□ 0.83
TRAPPC12-201ENST00000324266 FAM169AQ9Y6X4 670 aa20.24■□□□□ 0.83
TRAPPC12-201ENST00000324266 CLSTN1O94985 981 aa20.24■□□□□ 0.83
TRAPPC12-201ENST00000324266 NCAPH2Q6IBW4 605 aa20.24■□□□□ 0.83
TRAPPC12-201ENST00000324266 NOA1Q8NC60 698 aaKnown RBP20.24■□□□□ 0.83
TRAPPC12-201ENST00000324266 ZNF384Q8TF68 577 aa20.24■□□□□ 0.83
TRAPPC12-201ENST00000324266 TRIM6Q9C030 488 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC12-201ENST00000324266 TRIM49BA6NDI0 452 aa20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 LRRC10BA6NIK2 292 aa20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 USP17L12C9JPN9 530 aa20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 USP17L21D6R901 530 aa20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 FAM182BQ5T319 152 aa20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 CYP26C1Q6V0L0 522 aa20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 QTRT2Q9H974 415 aaKnown RBP20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 TRPC5Q9UL62 973 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 TFR2Q9UP52 801 aa20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 COL1A1P02452 1464 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 CICQ96RK0 1608 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 GTPBP6O43824 516 aaPredicted RBP20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 UBXN1Q04323 297 aa20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 INTS5Q6P9B9 1019 aaKnown RBP20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 CCDC102AQ96A19 550 aa20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 L1RE1Q9UN81 338 aa20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 NIP7Q9Y221 180 aaKnown RBP eCLIP20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 DUOX1Q9NRD9 1551 aa20.23■□□□□ 0.83
TRAPPC12-201ENST00000324266 CTAGE15A4D2H0 777 aa20.22■□□□□ 0.83
TRAPPC12-201ENST00000324266 PHACTR2O75167 634 aa20.22■□□□□ 0.83
TRAPPC12-201ENST00000324266 CTAGE8P0CG41 777 aa20.22■□□□□ 0.83
TRAPPC12-201ENST00000324266 RDXP35241 583 aaKnown RBP20.22■□□□□ 0.83
TRAPPC12-201ENST00000324266 PRCPP42785 496 aa20.22■□□□□ 0.83
TRAPPC12-201ENST00000324266 USP5P45974 858 aa20.22■□□□□ 0.83
TRAPPC12-201ENST00000324266 CRYMQ14894 314 aa20.22■□□□□ 0.83
TRAPPC12-201ENST00000324266 SKIDA1Q1XH10 827 aa20.22■□□□□ 0.83
TRAPPC12-201ENST00000324266 ZC3H12AQ5D1E8 599 aaKnown RBP20.22■□□□□ 0.83
TRAPPC12-201ENST00000324266 CTAGE6Q86UF2 777 aa20.22■□□□□ 0.83
TRAPPC12-201ENST00000324266 CTAGE4Q8IX94 777 aa20.22■□□□□ 0.83
TRAPPC12-201ENST00000324266 TATDN2Q93075 761 aa20.22■□□□□ 0.83
TRAPPC12-201ENST00000324266 GUCA1BQ9UMX6 200 aa20.22■□□□□ 0.83
TRAPPC12-201ENST00000324266 EP400Q96L91 3159 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms