RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 CCDC196A0A1B0GTZ2 297 aa17.99■□□□□ 0.47
CRAT-201ENST00000318080 ATP1A1P05023 1023 aaKnown RBP17.99■□□□□ 0.47
CRAT-201ENST00000318080 KCNV1Q6PIU1 500 aa17.98■□□□□ 0.47
CRAT-201ENST00000318080 MMS22LQ6ZRQ5 1243 aa17.98■□□□□ 0.47
CRAT-201ENST00000318080 NACAP1Q9BZK3 213 aa17.98■□□□□ 0.47
CRAT-201ENST00000318080 LIMA1Q9UHB6 759 aaKnown RBP17.98■□□□□ 0.47
CRAT-201ENST00000318080 KCNJ18B7U540 433 aa17.98■□□□□ 0.47
CRAT-201ENST00000318080 ERLIN2O94905 339 aa17.98■□□□□ 0.47
CRAT-201ENST00000318080 KCNJ12Q14500 433 aa17.98■□□□□ 0.47
CRAT-201ENST00000318080 TCP11X2Q5H9J9 407 aa17.98■□□□□ 0.47
CRAT-201ENST00000318080 IRF2BP1Q8IU81 584 aa17.98■□□□□ 0.47
CRAT-201ENST00000318080 NELFBQ8WX92 580 aa17.98■□□□□ 0.47
CRAT-201ENST00000318080 RNF26Q9BY78 433 aaPredicted RBP17.98■□□□□ 0.47
CRAT-201ENST00000318080 FAM169AQ9Y6X4 670 aa17.98■□□□□ 0.47
CRAT-201ENST00000318080 ZC3H4Q9UPT8 1303 aaKnown RBP17.98■□□□□ 0.47
CRAT-201ENST00000318080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.97■□□□□ 0.47
CRAT-201ENST00000318080 TTC26A0AVF1 554 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 POTEB2H3BUK9 544 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 AGPSO00116 658 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 PDE8AO60658 829 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 PMS1P54277 932 aaKnown RBP17.97■□□□□ 0.47
CRAT-201ENST00000318080 UBXN1Q04323 297 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 STIM1Q13586 685 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 EZH2Q15910 746 aaKnown RBP17.97■□□□□ 0.47
CRAT-201ENST00000318080 TTC38Q5R3I4 469 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 CYP26C1Q6V0L0 522 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 EFCAB13Q8IY85 973 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 RRP36Q96EU6 259 aaKnown RBP17.97■□□□□ 0.47
CRAT-201ENST00000318080 BRMS1Q9HCU9 246 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 LRP2BPQ9P2M1 347 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 ANKRD36CQ5JPF3 1778 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 LRRC10BA6NIK2 292 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 MCM7P33993 719 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 WHAMMP3Q1A5X7 153 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 RC3H1Q5TC82 1133 aaKnown RBP17.97■□□□□ 0.47
CRAT-201ENST00000318080 MCTP2Q6DN12 878 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 PDXDC2PQ6P474 469 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 C3orf67Q6ZVT6 689 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 TNFRSF25Q93038 417 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 FAM212AQ96EL1 285 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 EPN1Q9Y6I3 576 aaPredicted RBP17.97■□□□□ 0.47
CRAT-201ENST00000318080 ITIH6Q6UXX5 1313 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 ZNF831Q5JPB2 1677 aa17.97■□□□□ 0.47
CRAT-201ENST00000318080 NMT2O60551 498 aa17.96■□□□□ 0.47
CRAT-201ENST00000318080 SLC5A1P13866 664 aa17.96■□□□□ 0.47
CRAT-201ENST00000318080 HNRNPH1P31943 449 aaKnown RBP17.96■□□□□ 0.47
CRAT-201ENST00000318080 KCTD19Q17RG1 926 aaPredicted RBP17.96■□□□□ 0.47
CRAT-201ENST00000318080 PIK3AP1Q6ZUJ8 805 aa17.96■□□□□ 0.47
CRAT-201ENST00000318080 PES1O00541 588 aaKnown RBP17.96■□□□□ 0.47
CRAT-201ENST00000318080 NDUFA10O95299 355 aa17.96■□□□□ 0.47
CRAT-201ENST00000318080 CYP7A1P22680 504 aa17.96■□□□□ 0.47
CRAT-201ENST00000318080 PRCPP42785 496 aa17.96■□□□□ 0.47
CRAT-201ENST00000318080 CCDC148Q8NFR7 591 aa17.96■□□□□ 0.47
CRAT-201ENST00000318080 ABCF2Q9UG63 623 aa17.96■□□□□ 0.47
CRAT-201ENST00000318080 A0A087WUV0 522 aaPredicted RBP17.96■□□□□ 0.46
CRAT-201ENST00000318080 MYO1FO00160 1098 aa17.96■□□□□ 0.46
CRAT-201ENST00000318080 SEMA3EO15041 775 aa17.96■□□□□ 0.46
CRAT-201ENST00000318080 IRAK1P51617 712 aa17.96■□□□□ 0.46
CRAT-201ENST00000318080 C2orf54Q08AI8 447 aa17.96■□□□□ 0.46
CRAT-201ENST00000318080 PAK1Q13153 545 aa17.96■□□□□ 0.46
CRAT-201ENST00000318080 TMTC2Q8N394 836 aa17.96■□□□□ 0.46
CRAT-201ENST00000318080 CCDC51Q96ER9 411 aa17.96■□□□□ 0.46
CRAT-201ENST00000318080 CHD4Q14839 1912 aa17.95■□□□□ 0.46
CRAT-201ENST00000318080 RCCD1A6NED2 376 aa17.95■□□□□ 0.46
CRAT-201ENST00000318080 NTSR2O95665 410 aa17.95■□□□□ 0.46
CRAT-201ENST00000318080 HERVK_113P62684 666 aa17.95■□□□□ 0.46
CRAT-201ENST00000318080 DYNLL1P63167 89 aaKnown RBP17.95■□□□□ 0.46
CRAT-201ENST00000318080 BCAS4Q8TDM0 211 aa17.95■□□□□ 0.46
CRAT-201ENST00000318080 HDAC7Q8WUI4 952 aa17.95■□□□□ 0.46
CRAT-201ENST00000318080 FERMT2Q96AC1 680 aa17.95■□□□□ 0.46
CRAT-201ENST00000318080 MED4Q9NPJ6 270 aa17.95■□□□□ 0.46
CRAT-201ENST00000318080 SMARCAL1Q9NZC9 954 aa17.95■□□□□ 0.46
CRAT-201ENST00000318080 NARFQ9UHQ1 456 aa17.95■□□□□ 0.46
CRAT-201ENST00000318080 PDE2AO00408 941 aaPredicted RBP17.95■□□□□ 0.46
CRAT-201ENST00000318080 ZPR1O75312 459 aa17.95■□□□□ 0.46
CRAT-201ENST00000318080 USP14P54578 494 aa17.95■□□□□ 0.46
CRAT-201ENST00000318080 ATP2C1P98194 919 aaPredicted RBP17.95■□□□□ 0.46
CRAT-201ENST00000318080 WDR59Q6PJI9 974 aa17.95■□□□□ 0.46
CRAT-201ENST00000318080 ZSCAN10Q96SZ4 725 aaPredicted RBP17.95■□□□□ 0.46
CRAT-201ENST00000318080 PLIN2Q99541 437 aa17.95■□□□□ 0.46
CRAT-201ENST00000318080 RWDD2AQ9UIY3 292 aa17.95■□□□□ 0.46
CRAT-201ENST00000318080 DUSP10Q9Y6W6 482 aa17.95■□□□□ 0.46
CRAT-201ENST00000318080 MATR3P43243 847 aaKnown RBP eCLIP17.94■□□□□ 0.46
CRAT-201ENST00000318080 ERFEQ4G0M1 354 aa17.94■□□□□ 0.46
CRAT-201ENST00000318080 TRAPPC3LQ5T215 181 aa17.94■□□□□ 0.46
CRAT-201ENST00000318080 TRAPPC11Q7Z392 1133 aa17.94■□□□□ 0.46
CRAT-201ENST00000318080 MROH5Q6ZUA9 1318 aa17.94■□□□□ 0.46
CRAT-201ENST00000318080 PNPLA7Q6ZV29 1317 aa17.94■□□□□ 0.46
CRAT-201ENST00000318080 PRPF3O43395 683 aaKnown RBP17.94■□□□□ 0.46
CRAT-201ENST00000318080 RFC4P35249 363 aa17.94■□□□□ 0.46
CRAT-201ENST00000318080 KLK7P49862 253 aa17.94■□□□□ 0.46
CRAT-201ENST00000318080 TROAPQ12815 778 aa17.94■□□□□ 0.46
CRAT-201ENST00000318080 SRBD1Q8N5C6 995 aaKnown RBP17.94■□□□□ 0.46
CRAT-201ENST00000318080 PSMB7Q99436 277 aa17.94■□□□□ 0.46
CRAT-201ENST00000318080 SELENOOQ9BVL4 669 aa17.94■□□□□ 0.46
CRAT-201ENST00000318080 CXorf56Q9H5V9 222 aa17.94■□□□□ 0.46
CRAT-201ENST00000318080 PP2D1A8MPX8 630 aa17.93■□□□□ 0.46
CRAT-201ENST00000318080 NKRFO15226 690 aaKnown RBP eCLIP17.93■□□□□ 0.46
CRAT-201ENST00000318080 EN1Q05925 392 aaPredicted RBP17.93■□□□□ 0.46
CRAT-201ENST00000318080 IFIT1BQ5T764 474 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms